RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 LINC00337Q8N6G1 96 aa4.49□□□□□ -1.69
PSMD6-204ENST00000467853 CCL24O00175 119 aa4.49□□□□□ -1.69
PSMD6-204ENST00000467853 MUC6Q6W4X9 2439 aa4.49□□□□□ -1.69
PSMD6-204ENST00000467853 LECT2O14960 151 aa4.49□□□□□ -1.69
PSMD6-204ENST00000467853 OBSCN-AS1Q96MR7 158 aa4.49□□□□□ -1.69
PSMD6-204ENST00000467853 IGKV3OR2-268A0A0C4DH90 116 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 Q96MF0 132 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 DMXL2Q8TDJ6 3036 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 IGKV2-28A0A075B6P5 120 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 IGKV2D-28P01615 120 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 HIST1H4AP62805 103 aaKnown RBP4.48□□□□□ -1.69
PSMD6-204ENST00000467853 NBASA2RRP1 2371 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 IGHV3OR16-9A0A0B4J2B5 98 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 H3BQ85 93 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 RPS28P62857 69 aaKnown RBP4.48□□□□□ -1.69
PSMD6-204ENST00000467853 C14orf132Q9NPU4 83 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 HRNRQ86YZ3 2850 aaPredicted RBP4.48□□□□□ -1.69
PSMD6-204ENST00000467853 SPTAN1Q13813 2472 aaKnown RBP4.48□□□□□ -1.69
PSMD6-204ENST00000467853 A0A087WYN8 130 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 TMEM256-PLSCR3K7ERE1 68 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 PFN2P35080 140 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 SERP2Q8N6R1 65 aa4.48□□□□□ -1.69
PSMD6-204ENST00000467853 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.47□□□□□ -1.69
PSMD6-204ENST00000467853 SMG1Q96Q15 3661 aaKnown RBP4.47□□□□□ -1.69
PSMD6-204ENST00000467853 LY6G6DO95868 133 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 Q8IZM0 81 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 TMEM258P61165 79 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 MAPK1IP1LQ8NDC0 245 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 BSNQ9UPA5 3926 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 CCKP06307 115 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 COX17Q14061 63 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 C22orf24Q9Y442 160 aa4.47□□□□□ -1.69
PSMD6-204ENST00000467853 NDUFC2O95298 119 aa4.46□□□□□ -1.69
PSMD6-204ENST00000467853 DEFB113Q30KQ7 82 aa4.46□□□□□ -1.69
PSMD6-204ENST00000467853 MUC7Q8TAX7 377 aa4.46□□□□□ -1.69
PSMD6-204ENST00000467853 NRGNQ92686 78 aa4.46□□□□□ -1.69
PSMD6-204ENST00000467853 TACC2O95359 2948 aa4.46□□□□□ -1.69
PSMD6-204ENST00000467853 LINC00959A0A1B0GUT2 108 aa4.46□□□□□ -1.7
PSMD6-204ENST00000467853 hADV29S1A0JD25 119 aa4.46□□□□□ -1.7
PSMD6-204ENST00000467853 AKAP6Q13023 2319 aa4.46□□□□□ -1.7
PSMD6-204ENST00000467853 CFAP47Q6ZTR5 3102 aa4.46□□□□□ -1.7
PSMD6-204ENST00000467853 LRBAP50851 2863 aa4.46□□□□□ -1.7
PSMD6-204ENST00000467853 A0A1B0GUV1 79 aa4.46□□□□□ -1.7
PSMD6-204ENST00000467853 IGKV3D-7A0A0C4DH55 119 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 FHL2Q14192 279 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 LINC00167Q96N53 147 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 RPL35AP18077 110 aaKnown RBP4.45□□□□□ -1.7
PSMD6-204ENST00000467853 UBL5Q9BZL1 73 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 TRBV10-3A0A0K0K1G6 114 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 C3orf56Q8N813 242 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 KIR2DL5BQ8NHK3 375 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 C2orf48Q96LS8 159 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 LINC00846Q9NV44 126 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 SORL1Q92673 2214 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 IGLV4-60A0A075B6I1 120 aa4.45□□□□□ -1.7
PSMD6-204ENST00000467853 MUC3AQ02505 3323 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 LOC100131303A0A0U1RQF7 123 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 USP17L23D6RBM5 183 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 CEP295Q9C0D2 2601 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 NCR3O14931 201 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 PLAC8L1A1L4L8 177 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 BCE1O60756 84 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 Q8N814 137 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 DMXL1Q9Y485 3027 aa4.44□□□□□ -1.7
PSMD6-204ENST00000467853 DNAJC9-AS1A6NH13 148 aa4.43□□□□□ -1.7
PSMD6-204ENST00000467853 SMIM9A6NGZ8 99 aa4.43□□□□□ -1.7
PSMD6-204ENST00000467853 PDE6GP18545 87 aa4.43□□□□□ -1.7
PSMD6-204ENST00000467853 IGLV1-51P01701 117 aa4.43□□□□□ -1.7
PSMD6-204ENST00000467853 XCL1P47992 114 aa4.43□□□□□ -1.7
PSMD6-204ENST00000467853 ATMQ13315 3056 aa4.43□□□□□ -1.7
PSMD6-204ENST00000467853 GYPEP15421 78 aa4.43□□□□□ -1.7
PSMD6-204ENST00000467853 DCHS2Q6V1P9 2916 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 C16orf95Q9H693 158 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 PRO0255Q9UI72 69 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 IGF2RP11717 2491 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 C5orf47Q569G3 176 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 CD164L2Q6UWJ8 174 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 C11orf68Q9H3H3 251 aaKnown RBP4.42□□□□□ -1.7
PSMD6-204ENST00000467853 SLPIP03973 132 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 GIG44P09565 113 aaPredicted RBP4.42□□□□□ -1.7
PSMD6-204ENST00000467853 CSNK1G2-AS1Q8NCQ2 148 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 CSPG4Q6UVK1 2322 aa4.42□□□□□ -1.7
PSMD6-204ENST00000467853 DEFB130BP0DP73 79 aa4.41□□□□□ -1.7
PSMD6-204ENST00000467853 DEFB130AP0DP74 79 aa4.41□□□□□ -1.7
PSMD6-204ENST00000467853 ZNF561-AS1K7EIQ3 104 aa4.41□□□□□ -1.7
PSMD6-204ENST00000467853 RBM3P98179 157 aaKnown RBP4.41□□□□□ -1.7
PSMD6-204ENST00000467853 LINC00612Q8N6U2 182 aa4.41□□□□□ -1.7
PSMD6-204ENST00000467853 IGHV4-28A0A0C4DH34 117 aa4.4□□□□□ -1.7
PSMD6-204ENST00000467853 LYRM9A8MSI8 78 aa4.4□□□□□ -1.7
PSMD6-204ENST00000467853 LYPD5Q6UWN5 251 aa4.4□□□□□ -1.71
PSMD6-204ENST00000467853 RNASE1P07998 156 aaKnown RBP4.39□□□□□ -1.71
PSMD6-204ENST00000467853 C19orf73Q9NVV2 129 aa4.39□□□□□ -1.71
PSMD6-204ENST00000467853 CREBBPQ92793 2442 aa4.39□□□□□ -1.71
PSMD6-204ENST00000467853 LOC110117498A0A087WWA1 95 aa4.39□□□□□ -1.71
PSMD6-204ENST00000467853 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
PSMD6-204ENST00000467853 FAM19A5Q7Z5A7 132 aaPredicted RBP4.39□□□□□ -1.71
PSMD6-204ENST00000467853 DSCR8Q96T75 97 aa4.39□□□□□ -1.71
PSMD6-204ENST00000467853 LAMTOR3Q9UHA4 124 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms