RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 HECTD1Q9ULT8 2610 aa-1.8□□□□□ -2.7
SMC4-207ENST00000467263 CFTRP13569 1480 aa-1.8□□□□□ -2.7
SMC4-207ENST00000467263 GRIN2AQ12879 1464 aa-1.8□□□□□ -2.7
SMC4-207ENST00000467263 SFT2D2O95562 160 aa-1.8□□□□□ -2.7
SMC4-207ENST00000467263 MAFIPQ8WZ33 124 aa-1.8□□□□□ -2.7
SMC4-207ENST00000467263 RAPGEF6Q8TEU7 1601 aa-1.8□□□□□ -2.7
SMC4-207ENST00000467263 NSD3Q9BZ95 1437 aa-1.81□□□□□ -2.7
SMC4-207ENST00000467263 SERP1Q9Y6X1 66 aa-1.81□□□□□ -2.7
SMC4-207ENST00000467263 SONP18583 2426 aaKnown RBP-1.82□□□□□ -2.7
SMC4-207ENST00000467263 TRBV7-4A0A0J9YYF1 115 aa-1.82□□□□□ -2.7
SMC4-207ENST00000467263 TULP4Q9NRJ4 1543 aa-1.82□□□□□ -2.7
SMC4-207ENST00000467263 BIRC6Q9NR09 4857 aa-1.83□□□□□ -2.7
SMC4-207ENST00000467263 ARPC4P59998 168 aa-1.83□□□□□ -2.7
SMC4-207ENST00000467263 RERGLQ9H628 205 aa-1.83□□□□□ -2.7
SMC4-207ENST00000467263 ITPR3Q14573 2671 aa-1.84□□□□□ -2.7
SMC4-207ENST00000467263 LINC00959A0A1B0GUT2 108 aa-1.84□□□□□ -2.7
SMC4-207ENST00000467263 SYS1-DBNDD2H3BUS1 97 aa-1.85□□□□□ -2.71
SMC4-207ENST00000467263 MGPP08493 103 aa-1.85□□□□□ -2.71
SMC4-207ENST00000467263 C10orf113Q5VZT2 155 aa-1.85□□□□□ -2.71
SMC4-207ENST00000467263 MRPL54Q6P161 138 aaKnown RBP-1.85□□□□□ -2.71
SMC4-207ENST00000467263 TMEM263Q8WUH6 116 aaKnown RBP-1.85□□□□□ -2.71
SMC4-207ENST00000467263 LOC285095A0A1B0GVY8 99 aa-1.86□□□□□ -2.71
SMC4-207ENST00000467263 SPRR2EP22531 72 aa-1.86□□□□□ -2.71
SMC4-207ENST00000467263 PFDN5Q99471 154 aa-1.86□□□□□ -2.71
SMC4-207ENST00000467263 KIAA0556O60303 1618 aa-1.87□□□□□ -2.71
SMC4-207ENST00000467263 RYR2Q92736 4967 aa-1.88□□□□□ -2.71
SMC4-207ENST00000467263 SNRNP25Q9BV90 132 aaKnown RBP-1.88□□□□□ -2.71
SMC4-207ENST00000467263 MYH7P12883 1935 aa-1.88□□□□□ -2.71
SMC4-207ENST00000467263 CPSF1Q10570 1443 aaKnown RBP-1.89□□□□□ -2.71
SMC4-207ENST00000467263 HMGXB3Q12766 1538 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 COX8AP10176 69 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 UBA52P62987 128 aaKnown RBP-1.89□□□□□ -2.71
SMC4-207ENST00000467263 DEFB135Q30KP9 77 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 FDCSPQ8NFU4 85 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 PPP3R2Q96LZ3 170 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 SPRR4Q96PI1 79 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 SPANXDQ9BXN6 97 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 FAIMQ9NVQ4 179 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 APLNQ9ULZ1 77 aa-1.89□□□□□ -2.71
SMC4-207ENST00000467263 MYOM1P52179 1685 aa-1.9□□□□□ -2.71
SMC4-207ENST00000467263 FASNP49327 2511 aaKnown RBP-1.9□□□□□ -2.71
SMC4-207ENST00000467263 MIF4GDA9UHW6 222 aaKnown RBP-1.9□□□□□ -2.71
SMC4-207ENST00000467263 IGLC1P0CG04 106 aa-1.9□□□□□ -2.71
SMC4-207ENST00000467263 MEIG1Q5JSS6 88 aa-1.9□□□□□ -2.71
SMC4-207ENST00000467263 NAA60Q9H7X0 242 aa-1.9□□□□□ -2.71
SMC4-207ENST00000467263 NXT2Q9NPJ8 142 aaKnown RBP-1.91□□□□□ -2.72
SMC4-207ENST00000467263 MAGI1Q96QZ7 1491 aaPredicted RBP-1.91□□□□□ -2.72
SMC4-207ENST00000467263 DNAH6Q9C0G6 4158 aa-1.91□□□□□ -2.72
SMC4-207ENST00000467263 TCHHQ07283 1943 aa-1.91□□□□□ -2.72
SMC4-207ENST00000467263 FMN2Q9NZ56 1722 aa-1.91□□□□□ -2.72
SMC4-207ENST00000467263 CHKB-CPT1BH3BT56 60 aa-1.92□□□□□ -2.72
SMC4-207ENST00000467263 ARHGEF5Q12774 1597 aa-1.93□□□□□ -2.72
SMC4-207ENST00000467263 SETBP1Q9Y6X0 1596 aa-1.93□□□□□ -2.72
SMC4-207ENST00000467263 FAM25AB3EWG3 89 aa-1.93□□□□□ -2.72
SMC4-207ENST00000467263 FAM25CB3EWG5 89 aa-1.93□□□□□ -2.72
SMC4-207ENST00000467263 FAM25GB3EWG6 89 aa-1.93□□□□□ -2.72
SMC4-207ENST00000467263 USMG5Q96IX5 58 aa-1.93□□□□□ -2.72
SMC4-207ENST00000467263 LINC01600Q96MT4 127 aa-1.93□□□□□ -2.72
SMC4-207ENST00000467263 LINC00474Q9P2X8 69 aa-1.93□□□□□ -2.72
SMC4-207ENST00000467263 LAMA2P24043 3122 aaKnown RBP-1.93□□□□□ -2.72
SMC4-207ENST00000467263 TACC2O95359 2948 aa-1.94□□□□□ -2.72
SMC4-207ENST00000467263 CPSF4LA6NMK7 179 aaKnown RBP-1.95□□□□□ -2.72
SMC4-207ENST00000467263 IFNGP01579 166 aa-1.95□□□□□ -2.72
SMC4-207ENST00000467263 CATR1Q13166 79 aa-1.95□□□□□ -2.72
SMC4-207ENST00000467263 Q56UQ5 140 aa-1.95□□□□□ -2.72
SMC4-207ENST00000467263 FAM223AQ8IWN6 122 aa-1.95□□□□□ -2.72
SMC4-207ENST00000467263 SPTBN4Q9H254 2564 aa-1.95□□□□□ -2.72
SMC4-207ENST00000467263 PHLPP1O60346 1717 aa-1.95□□□□□ -2.72
SMC4-207ENST00000467263 HTTP42858 3142 aa-1.96□□□□□ -2.72
SMC4-207ENST00000467263 LOC105371267A0A1B0GV96 52 aa-1.96□□□□□ -2.72
SMC4-207ENST00000467263 COMMD6Q7Z4G1 85 aa-1.96□□□□□ -2.72
SMC4-207ENST00000467263 MYOZ3Q8TDC0 251 aa-1.96□□□□□ -2.72
SMC4-207ENST00000467263 ARL11Q969Q4 196 aa-1.96□□□□□ -2.72
SMC4-207ENST00000467263 ARL2-SNX15V9GYD0 113 aa-1.96□□□□□ -2.72
SMC4-207ENST00000467263 MYO18BQ8IUG5 2567 aa-1.97□□□□□ -2.72
SMC4-207ENST00000467263 SSSCA1O60232 199 aa-1.97□□□□□ -2.72
SMC4-207ENST00000467263 WHAMMP3Q1A5X7 153 aa-1.97□□□□□ -2.72
SMC4-207ENST00000467263 C8orf59Q8N0T1 100 aaPredicted RBP-1.97□□□□□ -2.72
SMC4-207ENST00000467263 CDC42SE2Q9NRR3 84 aa-1.97□□□□□ -2.72
SMC4-207ENST00000467263 PAIP2BQ9ULR5 123 aaKnown RBP-1.97□□□□□ -2.72
SMC4-207ENST00000467263 FOCADQ5VW36 1801 aa-1.97□□□□□ -2.72
SMC4-207ENST00000467263 TET3O43151 1660 aa-1.97□□□□□ -2.73
SMC4-207ENST00000467263 GNG7O60262 68 aa-1.98□□□□□ -2.73
SMC4-207ENST00000467263 C5orf38Q86SI9 138 aa-1.98□□□□□ -2.73
SMC4-207ENST00000467263 LCN9Q8WX39 176 aa-1.98□□□□□ -2.73
SMC4-207ENST00000467263 LINC00470Q9BZP3 86 aa-1.98□□□□□ -2.73
SMC4-207ENST00000467263 UQCR10Q9UDW1 63 aa-1.98□□□□□ -2.73
SMC4-207ENST00000467263 SHROOM2Q13796 1616 aa-1.99□□□□□ -2.73
SMC4-207ENST00000467263 APOC2P02655 101 aa-1.99□□□□□ -2.73
SMC4-207ENST00000467263 SELENOWP63302 87 aa-1.99□□□□□ -2.73
SMC4-207ENST00000467263 RNF213Q63HN8 5207 aa-1.99□□□□□ -2.73
SMC4-207ENST00000467263 PRRC2CQ9Y520 2896 aaKnown RBP-2□□□□□ -2.73
SMC4-207ENST00000467263 FAM167A-AS1Q96KT0 104 aa-2□□□□□ -2.73
SMC4-207ENST00000467263 SMG6Q86US8 1419 aaKnown RBP-2□□□□□ -2.73
SMC4-207ENST00000467263 MUC17Q685J3 4493 aa-2.01□□□□□ -2.73
SMC4-207ENST00000467263 ROBO1Q9Y6N7 1651 aa-2.01□□□□□ -2.73
SMC4-207ENST00000467263 ANKHD1Q8IWZ3 2542 aaKnown RBP-2.01□□□□□ -2.73
SMC4-207ENST00000467263 NBASA2RRP1 2371 aa-2.01□□□□□ -2.73
SMC4-207ENST00000467263 PAPPA2Q9BXP8 1791 aa-2.02□□□□□ -2.73
SMC4-207ENST00000467263 BTG2P78543 158 aa-2.02□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms