RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, human

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-206	ENST00000466742	FLNA	P21333	2647 aa	Known RBP	11.24	□□□□□ -0.61
ABCF3-206	ENST00000466742	TMEM243	Q9BU79	118 aa		11.24	□□□□□ -0.61
ABCF3-206	ENST00000466742	C16orf95	Q9H693	158 aa		11.24	□□□□□ -0.61
ABCF3-206	ENST00000466742	IGHV3OR16-13	A0A075B7E8	117 aa		11.24	□□□□□ -0.61
ABCF3-206	ENST00000466742		A0A087WWL8	130 aa		11.24	□□□□□ -0.61
ABCF3-206	ENST00000466742	IGHV3-74	A0A0B4J1X5	117 aa		11.24	□□□□□ -0.61
ABCF3-206	ENST00000466742	LINC00846	Q9NV44	126 aa		11.24	□□□□□ -0.61
ABCF3-206	ENST00000466742	MXRA5	Q9NR99	2828 aa		11.23	□□□□□ -0.61
ABCF3-206	ENST00000466742	RPL11	P62913	178 aa	Known RBP	11.23	□□□□□ -0.61
ABCF3-206	ENST00000466742	LINC00308	Q8TCZ7	52 aa		11.23	□□□□□ -0.61
ABCF3-206	ENST00000466742	FAM104A	Q969W3	186 aa		11.23	□□□□□ -0.61
ABCF3-206	ENST00000466742	FAM218A	Q96MZ4	157 aa		11.23	□□□□□ -0.61
ABCF3-206	ENST00000466742		V9GYY9	64 aa		11.23	□□□□□ -0.61
ABCF3-206	ENST00000466742	TLN2	Q9Y4G6	2542 aa		11.22	□□□□□ -0.61
ABCF3-206	ENST00000466742		M0QY20	66 aa		11.22	□□□□□ -0.61
ABCF3-206	ENST00000466742	OBSCN-AS1	Q96MR7	158 aa		11.22	□□□□□ -0.61
ABCF3-206	ENST00000466742	AKAP9	Q99996	3911 aa		11.22	□□□□□ -0.61
ABCF3-206	ENST00000466742		A8MZ25	164 aa		11.21	□□□□□ -0.61
ABCF3-206	ENST00000466742	NDUFA4	O00483	81 aa		11.21	□□□□□ -0.61
ABCF3-206	ENST00000466742	TRBV12-3	P01733	135 aa		11.21	□□□□□ -0.61
ABCF3-206	ENST00000466742	NDUFA1	O15239	70 aa		11.21	□□□□□ -0.62
ABCF3-206	ENST00000466742	IGHV3-11	P01762	117 aa		11.21	□□□□□ -0.62
ABCF3-206	ENST00000466742	CIRBP	Q14011	172 aa	Known RBP	11.21	□□□□□ -0.62
ABCF3-206	ENST00000466742	SMIM26	A0A096LP01	95 aa		11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	IGHV3-49	A0A0A0MS15	119 aa		11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	CD28	P10747	220 aa		11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	COPS9	Q8WXC6	57 aa		11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	RBMY1B	A6NDE4	496 aa	Known RBP	11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	RBMY1E	A6NEQ0	496 aa	Known RBP	11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	GHRH	P01286	108 aa		11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	RBMY1D	P0C7P1	496 aa	Known RBP	11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	RBMY1A1	P0DJD3	496 aa	Known RBP	11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	RBMY1C	P0DJD4	496 aa		11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	EDN2	P20800	178 aa		11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	RBMY1F	Q15415	496 aa	Known RBP	11.19	□□□□□ -0.62
ABCF3-206	ENST00000466742	XCL1	P47992	114 aa		11.18	□□□□□ -0.62
ABCF3-206	ENST00000466742	C10orf99	Q6UWK7	81 aa		11.18	□□□□□ -0.62
ABCF3-206	ENST00000466742	XCL2	Q9UBD3	114 aa		11.18	□□□□□ -0.62
ABCF3-206	ENST00000466742	UNQ9165/PRO28630	Q6UXU0	137 aa		11.18	□□□□□ -0.62
ABCF3-206	ENST00000466742		Q9HAA7	133 aa		11.17	□□□□□ -0.62
ABCF3-206	ENST00000466742	C14orf132	Q9NPU4	83 aa		11.17	□□□□□ -0.62
ABCF3-206	ENST00000466742	SON	P18583	2426 aa	Known RBP	11.17	□□□□□ -0.62
ABCF3-206	ENST00000466742	DNAJC9-AS1	A6NH13	148 aa		11.17	□□□□□ -0.62
ABCF3-206	ENST00000466742	C1orf195	Q5TG92	126 aa		11.17	□□□□□ -0.62
ABCF3-206	ENST00000466742	FP248	Q71RG6	208 aa	Predicted RBP	11.17	□□□□□ -0.62
ABCF3-206	ENST00000466742		H7BZZ5	65 aa		11.16	□□□□□ -0.62
ABCF3-206	ENST00000466742	C9orf129	Q5T035	196 aa	Known RBP	11.15	□□□□□ -0.62
ABCF3-206	ENST00000466742	FAM74A4	Q5TZK3	123 aa		11.15	□□□□□ -0.62
ABCF3-206	ENST00000466742	C20orf197	Q8N268	126 aa		11.15	□□□□□ -0.62
ABCF3-206	ENST00000466742	OVOL2	Q9BRP0	275 aa		11.15	□□□□□ -0.62
ABCF3-206	ENST00000466742	ACAN	P16112	2415 aa		11.15	□□□□□ -0.62
ABCF3-206	ENST00000466742	RPL28	P46779	137 aa	Known RBP	11.15	□□□□□ -0.62
ABCF3-206	ENST00000466742	UBE2E2	Q96LR5	201 aa		11.15	□□□□□ -0.62
ABCF3-206	ENST00000466742	ANK3	Q12955	4377 aa	Known RBP	11.15	□□□□□ -0.62
ABCF3-206	ENST00000466742	NOTCH2	Q04721	2471 aa		11.14	□□□□□ -0.63
ABCF3-206	ENST00000466742	SOCS3	O14543	225 aa		11.14	□□□□□ -0.63
ABCF3-206	ENST00000466742	HIST2H2BD	Q6DRA6	164 aa		11.14	□□□□□ -0.63
ABCF3-206	ENST00000466742	SOSTDC1	Q6X4U4	206 aa		11.14	□□□□□ -0.63
ABCF3-206	ENST00000466742	ESM1	Q9NQ30	184 aa		11.14	□□□□□ -0.63
ABCF3-206	ENST00000466742	MAST4	O15021	2626 aa		11.14	□□□□□ -0.63
ABCF3-206	ENST00000466742	KNCN	A6PVL3	124 aa		11.14	□□□□□ -0.63
ABCF3-206	ENST00000466742	MYO9A	B2RTY4	2548 aa		11.13	□□□□□ -0.63
ABCF3-206	ENST00000466742		K7EMT4	169 aa		11.13	□□□□□ -0.63
ABCF3-206	ENST00000466742	ATP5EP2	Q5VTU8	51 aa		11.13	□□□□□ -0.63
ABCF3-206	ENST00000466742	KLLN	B2CW77	178 aa		11.12	□□□□□ -0.63
ABCF3-206	ENST00000466742	HILS1	P60008	231 aa		11.12	□□□□□ -0.63
ABCF3-206	ENST00000466742	DEFB1	P60022	68 aa		11.12	□□□□□ -0.63
ABCF3-206	ENST00000466742	BCE1	O60756	84 aa		11.11	□□□□□ -0.63
ABCF3-206	ENST00000466742	PF4	P02776	101 aa		11.11	□□□□□ -0.63
ABCF3-206	ENST00000466742	S100A7L2	Q5SY68	101 aa		11.11	□□□□□ -0.63
ABCF3-206	ENST00000466742	LYPD5	Q6UWN5	251 aa		11.11	□□□□□ -0.63
ABCF3-206	ENST00000466742	RNASE1	P07998	156 aa	Known RBP	11.1	□□□□□ -0.63
ABCF3-206	ENST00000466742	IGLV5-45	A0A087WSX0	123 aa		11.1	□□□□□ -0.63
ABCF3-206	ENST00000466742	SMR3A	Q99954	134 aa		11.1	□□□□□ -0.63
ABCF3-206	ENST00000466742	RNASE13	Q5GAN3	156 aa	Known RBP	11.09	□□□□□ -0.63
ABCF3-206	ENST00000466742	RHPN1-AS1	Q9BWJ2	59 aa		11.09	□□□□□ -0.63
ABCF3-206	ENST00000466742	TRAV23DV6	A0A075B6W5	121 aa		11.09	□□□□□ -0.63
ABCF3-206	ENST00000466742	CYSRT1	A8MQ03	144 aa		11.09	□□□□□ -0.63
ABCF3-206	ENST00000466742		F6UB75	175 aa		11.09	□□□□□ -0.63
ABCF3-206	ENST00000466742	LY6G6D	O95868	133 aa		11.09	□□□□□ -0.63
ABCF3-206	ENST00000466742		Q9H8V8	135 aa		11.09	□□□□□ -0.63
ABCF3-206	ENST00000466742	TRBV10-3	A0A0K0K1G6	114 aa		11.08	□□□□□ -0.64
ABCF3-206	ENST00000466742	HOXD3	P31249	432 aa	Predicted RBP	11.08	□□□□□ -0.64
ABCF3-206	ENST00000466742	CDKN2A-AS1	Q9UH64	79 aa		11.08	□□□□□ -0.64
ABCF3-206	ENST00000466742	IGHV3-16	A0A0C4DH30	117 aa		11.08	□□□□□ -0.64
ABCF3-206	ENST00000466742	KLKP1	Q107X0	134 aa		11.08	□□□□□ -0.64
ABCF3-206	ENST00000466742	OTOG	Q6ZRI0	2925 aa		11.07	□□□□□ -0.64
ABCF3-206	ENST00000466742	TRAV13-2	A0A0B4J235	113 aa		11.07	□□□□□ -0.64
ABCF3-206	ENST00000466742	IGLV5-39	A0A0G2JS06	123 aa		11.07	□□□□□ -0.64
ABCF3-206	ENST00000466742	CCK	P06307	115 aa		11.07	□□□□□ -0.64
ABCF3-206	ENST00000466742	ZNF625	Q96I27	306 aa	Predicted RBP	11.07	□□□□□ -0.64
ABCF3-206	ENST00000466742	TRAV7	A0A075B6U4	112 aa		11.06	□□□□□ -0.64
ABCF3-206	ENST00000466742	BRK1	Q8WUW1	75 aa		11.06	□□□□□ -0.64
ABCF3-206	ENST00000466742	C4orf3	Q8WVX3	66 aa		11.06	□□□□□ -0.64
ABCF3-206	ENST00000466742	HIVEP2	P31629	2446 aa		11.06	□□□□□ -0.64
ABCF3-206	ENST00000466742		A0A087WYN8	130 aa		11.06	□□□□□ -0.64
ABCF3-206	ENST00000466742	MTOR	P42345	2549 aa		11.05	□□□□□ -0.64
ABCF3-206	ENST00000466742		A0A0U1RRA0	63 aa		11.04	□□□□□ -0.64
ABCF3-206	ENST00000466742		H0YGX0	51 aa		11.04	□□□□□ -0.64
ABCF3-206	ENST00000466742		A0A0U1RQV1	116 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms