RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 PKHD1P08F94 4074 aa9.43□□□□□ -0.9
DNMT3A-208ENST00000466601 IGHV3OR16-9A0A0B4J2B5 98 aa9.43□□□□□ -0.9
DNMT3A-208ENST00000466601 SERF1AO75920 110 aa9.43□□□□□ -0.9
DNMT3A-208ENST00000466601 MALP21145 153 aa9.43□□□□□ -0.9
DNMT3A-208ENST00000466601 GCSHP23434 173 aa9.43□□□□□ -0.9
DNMT3A-208ENST00000466601 HIGD2BQ4VC39 106 aa9.43□□□□□ -0.9
DNMT3A-208ENST00000466601 ATP5LO75964 103 aa9.42□□□□□ -0.9
DNMT3A-208ENST00000466601 LINC00310P59036 64 aa9.42□□□□□ -0.9
DNMT3A-208ENST00000466601 COX6A2Q02221 97 aa9.42□□□□□ -0.9
DNMT3A-208ENST00000466601 GVQW2A0A096LPI5 108 aaPredicted RBP9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BKO60814 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BJP06899 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BOP23527 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BBP33778 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BDP58876 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BCP62807 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 SEC11AP67812 179 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 PMVKQ15126 192 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST2H2BEQ16778 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 FAM19A2Q8N3H0 131 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BHQ93079 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BNQ99877 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 HIST1H2BMQ99879 126 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 CST9LQ9H4G1 147 aa9.41□□□□□ -0.9
DNMT3A-208ENST00000466601 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
DNMT3A-208ENST00000466601 NUPR1O60356 82 aa9.4□□□□□ -0.9
DNMT3A-208ENST00000466601 APOMO95445 188 aa9.4□□□□□ -0.9
DNMT3A-208ENST00000466601 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
DNMT3A-208ENST00000466601 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
DNMT3A-208ENST00000466601 A0A087WZ39 114 aa9.39□□□□□ -0.91
DNMT3A-208ENST00000466601 NDUFA6P56556 154 aa9.39□□□□□ -0.91
DNMT3A-208ENST00000466601 CNBPP62633 177 aaKnown RBP9.39□□□□□ -0.91
DNMT3A-208ENST00000466601 HERVK_113P63121 156 aa9.39□□□□□ -0.91
DNMT3A-208ENST00000466601 GEMIN7Q9H840 131 aaKnown RBP9.39□□□□□ -0.91
DNMT3A-208ENST00000466601 IGHV3-64A0A075B6Q5 118 aa9.38□□□□□ -0.91
DNMT3A-208ENST00000466601 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
DNMT3A-208ENST00000466601 SLPIP03973 132 aa9.38□□□□□ -0.91
DNMT3A-208ENST00000466601 LINC01620Q4KN68 170 aa9.38□□□□□ -0.91
DNMT3A-208ENST00000466601 IFI27L1Q96BM0 104 aa9.38□□□□□ -0.91
DNMT3A-208ENST00000466601 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.37□□□□□ -0.91
DNMT3A-208ENST00000466601 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
DNMT3A-208ENST00000466601 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
DNMT3A-208ENST00000466601 C9orf163Q8N9P6 203 aa9.37□□□□□ -0.91
DNMT3A-208ENST00000466601 LINC00526Q96FQ7 95 aa9.37□□□□□ -0.91
DNMT3A-208ENST00000466601 IGLV4-69A0A075B6H9 119 aa9.36□□□□□ -0.91
DNMT3A-208ENST00000466601 LEPROTL1O95214 131 aa9.36□□□□□ -0.91
DNMT3A-208ENST00000466601 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
DNMT3A-208ENST00000466601 ORAOV1Q8WV07 137 aa9.36□□□□□ -0.91
DNMT3A-208ENST00000466601 CDKN2A-AS1Q9UH64 79 aa9.36□□□□□ -0.91
DNMT3A-208ENST00000466601 SPAG11BQ08648 103 aa9.35□□□□□ -0.91
DNMT3A-208ENST00000466601 LINC00469Q8N7U9 141 aa9.35□□□□□ -0.91
DNMT3A-208ENST00000466601 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
DNMT3A-208ENST00000466601 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 IGLC3P0DOY3 106 aa9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 FABP4P15090 132 aa9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 PACRGQ96M98 296 aaPredicted RBP9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 HSPB8Q9UJY1 196 aa9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 CHTOPQ9Y3Y2 248 aaKnown RBP9.33□□□□□ -0.92
DNMT3A-208ENST00000466601 KIAA1109Q2LD37 5005 aa9.32□□□□□ -0.92
DNMT3A-208ENST00000466601 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
DNMT3A-208ENST00000466601 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
DNMT3A-208ENST00000466601 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
DNMT3A-208ENST00000466601 CHAC1Q9BUX1 264 aa9.32□□□□□ -0.92
DNMT3A-208ENST00000466601 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
DNMT3A-208ENST00000466601 F8WDY8 70 aa9.31□□□□□ -0.92
DNMT3A-208ENST00000466601 KIAA0087Q14695 138 aa9.31□□□□□ -0.92
DNMT3A-208ENST00000466601 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
DNMT3A-208ENST00000466601 Q6ZRU5 148 aa9.31□□□□□ -0.92
DNMT3A-208ENST00000466601 RYR1P21817 5038 aa9.31□□□□□ -0.92
DNMT3A-208ENST00000466601 H3BRM9 83 aa9.3□□□□□ -0.92
DNMT3A-208ENST00000466601 PRSS2P07478 247 aa9.3□□□□□ -0.92
DNMT3A-208ENST00000466601 Q6ZSA8 131 aa9.3□□□□□ -0.92
DNMT3A-208ENST00000466601 TOMM7Q9P0U1 55 aa9.3□□□□□ -0.92
DNMT3A-208ENST00000466601 DNAH8Q96JB1 4490 aa9.3□□□□□ -0.92
DNMT3A-208ENST00000466601 APOBP04114 4563 aaKnown RBP9.29□□□□□ -0.92
DNMT3A-208ENST00000466601 C11orf86A6NJI1 115 aa9.29□□□□□ -0.92
DNMT3A-208ENST00000466601 SMIM1B2RUZ4 78 aa9.29□□□□□ -0.92
DNMT3A-208ENST00000466601 H0Y8G0 127 aa9.29□□□□□ -0.92
DNMT3A-208ENST00000466601 NDUFA1O15239 70 aa9.29□□□□□ -0.92
DNMT3A-208ENST00000466601 ZNF22P17026 224 aaPredicted RBP9.29□□□□□ -0.92
DNMT3A-208ENST00000466601 XGP55808 180 aa9.29□□□□□ -0.92
DNMT3A-208ENST00000466601 MRPL35Q9NZE8 188 aaKnown RBP9.29□□□□□ -0.92
DNMT3A-208ENST00000466601 F8VRH5 84 aa9.28□□□□□ -0.92
DNMT3A-208ENST00000466601 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
DNMT3A-208ENST00000466601 C6orf226Q5I0X4 101 aa9.28□□□□□ -0.92
DNMT3A-208ENST00000466601 Q8IZM0 81 aa9.28□□□□□ -0.92
DNMT3A-208ENST00000466601 ODF1Q14990 250 aa9.27□□□□□ -0.93
DNMT3A-208ENST00000466601 RNF151Q2KHN1 245 aa9.27□□□□□ -0.93
DNMT3A-208ENST00000466601 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
DNMT3A-208ENST00000466601 UNQ6190/PRO20217Q6UXQ8 127 aa9.27□□□□□ -0.93
DNMT3A-208ENST00000466601 MAP1LC3CQ9BXW4 147 aa9.27□□□□□ -0.93
DNMT3A-208ENST00000466601 CKS1BP61024 79 aa9.26□□□□□ -0.93
DNMT3A-208ENST00000466601 HAMPP81172 84 aa9.26□□□□□ -0.93
DNMT3A-208ENST00000466601 C10orf25Q5T742 122 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms