RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 GAGE5Q13069 117 aa9.48□□□□□ -0.89
HMGXB4-206ENST00000466438 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
HMGXB4-206ENST00000466438 CYSLTR1Q9Y271 337 aa9.48□□□□□ -0.89
HMGXB4-206ENST00000466438 TMEM97Q5BJF2 176 aa9.47□□□□□ -0.89
HMGXB4-206ENST00000466438 LINC01600Q96MT4 127 aa9.47□□□□□ -0.89
HMGXB4-206ENST00000466438 LPAP08519 4548 aa9.46□□□□□ -0.89
HMGXB4-206ENST00000466438 ATP5LO75964 103 aa9.46□□□□□ -0.9
HMGXB4-206ENST00000466438 TSHBP01222 138 aa9.46□□□□□ -0.9
HMGXB4-206ENST00000466438 C2orf66Q6UXQ4 117 aa9.46□□□□□ -0.9
HMGXB4-206ENST00000466438 MAP1LC3CQ9BXW4 147 aa9.46□□□□□ -0.9
HMGXB4-206ENST00000466438 A0A096LNJ9 63 aa9.45□□□□□ -0.9
HMGXB4-206ENST00000466438 A0A0U1RQV1 116 aa9.45□□□□□ -0.9
HMGXB4-206ENST00000466438 LINC00694P0DN24 101 aa9.45□□□□□ -0.9
HMGXB4-206ENST00000466438 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
HMGXB4-206ENST00000466438 KRTDAPP60985 99 aa9.44□□□□□ -0.9
HMGXB4-206ENST00000466438 SMAGPQ0VAQ4 97 aa9.44□□□□□ -0.9
HMGXB4-206ENST00000466438 Q8N3U1 123 aa9.44□□□□□ -0.9
HMGXB4-206ENST00000466438 RMI2Q96E14 147 aa9.44□□□□□ -0.9
HMGXB4-206ENST00000466438 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
HMGXB4-206ENST00000466438 C20orf202A1L168 122 aa9.43□□□□□ -0.9
HMGXB4-206ENST00000466438 SMIM6P0DI80 62 aa9.43□□□□□ -0.9
HMGXB4-206ENST00000466438 IFI27L1Q96BM0 104 aa9.43□□□□□ -0.9
HMGXB4-206ENST00000466438 Q9UF83 564 aa9.43□□□□□ -0.9
HMGXB4-206ENST00000466438 TRBV25-1A0A075B6N4 114 aa9.42□□□□□ -0.9
HMGXB4-206ENST00000466438 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.42□□□□□ -0.9
HMGXB4-206ENST00000466438 C3orf79P0CE67 100 aa9.42□□□□□ -0.9
HMGXB4-206ENST00000466438 Q6ZN92 141 aa9.42□□□□□ -0.9
HMGXB4-206ENST00000466438 C20orf203Q8NBC4 194 aa9.42□□□□□ -0.9
HMGXB4-206ENST00000466438 SCGB3A1Q96QR1 104 aa9.42□□□□□ -0.9
HMGXB4-206ENST00000466438 JOSD1Q15040 202 aaPredicted RBP9.41□□□□□ -0.9
HMGXB4-206ENST00000466438 PET117Q6UWS5 81 aa9.41□□□□□ -0.9
HMGXB4-206ENST00000466438 ERASQ7Z444 233 aa9.41□□□□□ -0.9
HMGXB4-206ENST00000466438 TMEM141Q96I45 108 aa9.41□□□□□ -0.9
HMGXB4-206ENST00000466438 TIMM17AQ99595 171 aa9.41□□□□□ -0.9
HMGXB4-206ENST00000466438 SYS1-DBNDD2H3BUS1 97 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 H7C423 109 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 UBE2L6O14933 153 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 NPSP0C0P6 89 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 C14orf177Q52M58 125 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 PAPPA-AS1Q5QFB9 102 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 TMEM243Q9BU79 118 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 CHCHD7Q9BUK0 85 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 SPANXA1Q9NS26 97 aa9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.4□□□□□ -0.9
HMGXB4-206ENST00000466438 IGKV2D-24A0A075B6R9 120 aa9.39□□□□□ -0.91
HMGXB4-206ENST00000466438 A0A0J9YXV3 536 aa9.39□□□□□ -0.91
HMGXB4-206ENST00000466438 SCGB1D1O95968 90 aa9.39□□□□□ -0.91
HMGXB4-206ENST00000466438 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
HMGXB4-206ENST00000466438 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
HMGXB4-206ENST00000466438 H0Y8G0 127 aa9.38□□□□□ -0.91
HMGXB4-206ENST00000466438 PRSS1P07477 247 aa9.38□□□□□ -0.91
HMGXB4-206ENST00000466438 RPL39P62891 51 aaKnown RBP9.38□□□□□ -0.91
HMGXB4-206ENST00000466438 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
HMGXB4-206ENST00000466438 KRTAP10-8P60410 259 aa9.37□□□□□ -0.91
HMGXB4-206ENST00000466438 PKIAP61925 76 aa9.37□□□□□ -0.91
HMGXB4-206ENST00000466438 PYY3Q5JQD4 70 aa9.37□□□□□ -0.91
HMGXB4-206ENST00000466438 TIMM21Q9BVV7 248 aa9.37□□□□□ -0.91
HMGXB4-206ENST00000466438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 TRAV12-1A0A0B4J245 112 aa9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 IGIPA6NJ69 53 aa9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 PANO1I0J062 215 aa9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 ZNF25P17030 456 aaPredicted RBP9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 AMMECR1LQ6DCA0 310 aa9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 DGAT2L7PQ6IED9 249 aa9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 NTM-AS1Q6ZSK4 140 aa9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 TMEM101Q96IK0 257 aa9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 UBE2D4Q9Y2X8 147 aa9.36□□□□□ -0.91
HMGXB4-206ENST00000466438 LINC01545Q5VT33 79 aa9.35□□□□□ -0.91
HMGXB4-206ENST00000466438 MRPL52Q86TS9 123 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-206ENST00000466438 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
HMGXB4-206ENST00000466438 FGF6P10767 208 aa9.34□□□□□ -0.91
HMGXB4-206ENST00000466438 S100A12P80511 92 aa9.34□□□□□ -0.91
HMGXB4-206ENST00000466438 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-206ENST00000466438 A0A087WX48 190 aa9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 MRPS36P82909 103 aaKnown RBP9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 PMVKQ15126 192 aa9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 TEX43Q6ZNM6 134 aa9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 C9orf163Q8N9P6 203 aa9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 C12orf57Q99622 126 aa9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 VCX2Q9H322 139 aa9.33□□□□□ -0.92
HMGXB4-206ENST00000466438 IGLV4-3A0A075B6K6 122 aa9.32□□□□□ -0.92
HMGXB4-206ENST00000466438 PLNP26678 52 aa9.32□□□□□ -0.92
HMGXB4-206ENST00000466438 LINC00518Q8N0U6 118 aa9.32□□□□□ -0.92
HMGXB4-206ENST00000466438 F8VRH5 84 aa9.31□□□□□ -0.92
HMGXB4-206ENST00000466438 CIRBPQ14011 172 aaKnown RBP9.31□□□□□ -0.92
HMGXB4-206ENST00000466438 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
HMGXB4-206ENST00000466438 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
HMGXB4-206ENST00000466438 DPM2O94777 84 aa9.3□□□□□ -0.92
HMGXB4-206ENST00000466438 GAGE6Q13070 117 aa9.3□□□□□ -0.92
HMGXB4-206ENST00000466438 SDIM1Q6ZPB5 146 aa9.3□□□□□ -0.92
HMGXB4-206ENST00000466438 Q6ZUT4 128 aa9.3□□□□□ -0.92
HMGXB4-206ENST00000466438 VAMP8Q9BV40 100 aa9.3□□□□□ -0.92
HMGXB4-206ENST00000466438 KLK12Q9UKR0 248 aa9.3□□□□□ -0.92
HMGXB4-206ENST00000466438 TMEM262E9PQX1 116 aa9.29□□□□□ -0.92
HMGXB4-206ENST00000466438 IGKCP01834 107 aa9.29□□□□□ -0.92
HMGXB4-206ENST00000466438 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
HMGXB4-206ENST00000466438 AMELXQ99217 191 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms