RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
SMC4-204ENST00000462787 TET2Q6N021 2002 aaPredicted RBP11.44□□□□□ -0.58
SMC4-204ENST00000462787 CEP192Q8TEP8 1941 aa11.44□□□□□ -0.58
SMC4-204ENST00000462787 TRBV10-3A0A0K0K1G6 114 aa11.44□□□□□ -0.58
SMC4-204ENST00000462787 TECTAO75443 2155 aa11.43□□□□□ -0.58
SMC4-204ENST00000462787 C3orf84H3BNL1 204 aa11.43□□□□□ -0.58
SMC4-204ENST00000462787 DEFB4AO15263 64 aa11.43□□□□□ -0.58
SMC4-204ENST00000462787 A0A087WZ39 114 aa11.42□□□□□ -0.58
SMC4-204ENST00000462787 PRO0628Q9UI54 55 aa11.42□□□□□ -0.58
SMC4-204ENST00000462787 PRM2P04554 102 aa11.42□□□□□ -0.58
SMC4-204ENST00000462787 C2CD3Q4AC94 2353 aa11.42□□□□□ -0.58
SMC4-204ENST00000462787 M0R378 163 aa11.42□□□□□ -0.58
SMC4-204ENST00000462787 C1orf158Q8N1D5 194 aa11.41□□□□□ -0.58
SMC4-204ENST00000462787 H0Y9J4 135 aa11.41□□□□□ -0.58
SMC4-204ENST00000462787 ZNF73O43830 326 aaPredicted RBP11.41□□□□□ -0.58
SMC4-204ENST00000462787 LOC100131303A0A0U1RQF7 123 aa11.4□□□□□ -0.58
SMC4-204ENST00000462787 FAM19A1Q7Z5A9 133 aa11.39□□□□□ -0.59
SMC4-204ENST00000462787 Q8N3U1 123 aa11.39□□□□□ -0.59
SMC4-204ENST00000462787 LINC00315P59091 139 aa11.39□□□□□ -0.59
SMC4-204ENST00000462787 PRYO14603 147 aa11.38□□□□□ -0.59
SMC4-204ENST00000462787 SPG11Q96JI7 2443 aa11.38□□□□□ -0.59
SMC4-204ENST00000462787 UBE2AP49459 152 aa11.38□□□□□ -0.59
SMC4-204ENST00000462787 IGLV5-39A0A0G2JS06 123 aa11.37□□□□□ -0.59
SMC4-204ENST00000462787 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
SMC4-204ENST00000462787 SOSTDC1Q6X4U4 206 aa11.37□□□□□ -0.59
SMC4-204ENST00000462787 DHRS4-AS1Q9P1J3 65 aa11.37□□□□□ -0.59
SMC4-204ENST00000462787 PTPRQQ9UMZ3 2332 aa11.37□□□□□ -0.59
SMC4-204ENST00000462787 BCE1O60756 84 aa11.36□□□□□ -0.59
SMC4-204ENST00000462787 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
SMC4-204ENST00000462787 LINC00337Q8N6G1 96 aa11.35□□□□□ -0.59
SMC4-204ENST00000462787 ADAMTS20P59510 1910 aa11.35□□□□□ -0.59
SMC4-204ENST00000462787 DNAJC9-AS1A6NH13 148 aa11.35□□□□□ -0.59
SMC4-204ENST00000462787 EDN2P20800 178 aa11.35□□□□□ -0.59
SMC4-204ENST00000462787 BBC3Q96PG8 261 aaPredicted RBP11.35□□□□□ -0.59
SMC4-204ENST00000462787 HILS1P60008 231 aa11.34□□□□□ -0.59
SMC4-204ENST00000462787 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
SMC4-204ENST00000462787 A6NED7 52 aa11.33□□□□□ -0.6
SMC4-204ENST00000462787 TRBV7-6A0A0J9YX20 115 aa11.33□□□□□ -0.6
SMC4-204ENST00000462787 C19orf84I3L1E1 186 aa11.33□□□□□ -0.6
SMC4-204ENST00000462787 Q6ZVQ6 151 aa11.33□□□□□ -0.6
SMC4-204ENST00000462787 WFDC10BQ8IUB3 73 aa11.33□□□□□ -0.6
SMC4-204ENST00000462787 TMEM254Q8TBM7 123 aa11.33□□□□□ -0.6
SMC4-204ENST00000462787 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
SMC4-204ENST00000462787 CSPG4Q6UVK1 2322 aa11.32□□□□□ -0.6
SMC4-204ENST00000462787 SORL1Q92673 2214 aa11.32□□□□□ -0.6
SMC4-204ENST00000462787 PRRC2AP48634 2157 aaKnown RBP11.32□□□□□ -0.6
SMC4-204ENST00000462787 Q6ZSN1 163 aa11.32□□□□□ -0.6
SMC4-204ENST00000462787 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
SMC4-204ENST00000462787 ZFHX2Q9C0A1 2572 aaPredicted RBP11.32□□□□□ -0.6
SMC4-204ENST00000462787 LINC01547P58512 204 aaPredicted RBP11.31□□□□□ -0.6
SMC4-204ENST00000462787 PRR4Q16378 134 aa11.31□□□□□ -0.6
SMC4-204ENST00000462787 IGKV4-1P06312 121 aa11.31□□□□□ -0.6
SMC4-204ENST00000462787 CXCL6P80162 114 aa11.31□□□□□ -0.6
SMC4-204ENST00000462787 ZNF843Q8N446 348 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 HIGD2AQ9BW72 106 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 IGHV4-31P0DP07 118 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 Q8N2B8 174 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 IGLV4-60A0A075B6I1 120 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 CYSRT1A8MQ03 144 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 LELP1Q5T871 98 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 B9D2Q9BPU9 175 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 ATRXP46100 2492 aa11.3□□□□□ -0.6
SMC4-204ENST00000462787 FHL3Q13643 280 aa11.29□□□□□ -0.6
SMC4-204ENST00000462787 IGLV5-45A0A087WSX0 123 aa11.29□□□□□ -0.6
SMC4-204ENST00000462787 CELA1Q9UNI1 258 aa11.29□□□□□ -0.6
SMC4-204ENST00000462787 PRR3P79522 188 aaKnown RBP11.29□□□□□ -0.6
SMC4-204ENST00000462787 LINC00575Q6W349 94 aa11.29□□□□□ -0.6
SMC4-204ENST00000462787 C4orf26Q17RF5 130 aa11.28□□□□□ -0.6
SMC4-204ENST00000462787 WFDC13Q8IUB5 93 aa11.28□□□□□ -0.6
SMC4-204ENST00000462787 KIR2DL5BQ8NHK3 375 aa11.28□□□□□ -0.6
SMC4-204ENST00000462787 LINC01561Q8N1V8 128 aa11.28□□□□□ -0.6
SMC4-204ENST00000462787 NHLRC4P0CG21 123 aaPredicted RBP11.28□□□□□ -0.6
SMC4-204ENST00000462787 PMAIP1Q13794 54 aa11.28□□□□□ -0.6
SMC4-204ENST00000462787 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.61
SMC4-204ENST00000462787 FAM208BQ5VWN6 2430 aa11.27□□□□□ -0.61
SMC4-204ENST00000462787 C18orf65Q6ZTR6 163 aa11.27□□□□□ -0.61
SMC4-204ENST00000462787 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
SMC4-204ENST00000462787 ESRGQ1W209 222 aa11.26□□□□□ -0.61
SMC4-204ENST00000462787 IGKV2-28A0A075B6P5 120 aa11.25□□□□□ -0.61
SMC4-204ENST00000462787 IGKV2D-28P01615 120 aa11.25□□□□□ -0.61
SMC4-204ENST00000462787 RAI1Q7Z5J4 1906 aaPredicted RBP11.25□□□□□ -0.61
SMC4-204ENST00000462787 FAM218AQ96MZ4 157 aa11.25□□□□□ -0.61
SMC4-204ENST00000462787 LRCOL1A6NCL2 159 aa11.24□□□□□ -0.61
SMC4-204ENST00000462787 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
SMC4-204ENST00000462787 TTC28Q96AY4 2481 aa11.23□□□□□ -0.61
SMC4-204ENST00000462787 ACACBO00763 2458 aa11.23□□□□□ -0.61
SMC4-204ENST00000462787 EGFEM1PQ0D2K5 195 aa11.23□□□□□ -0.61
SMC4-204ENST00000462787 PRR15LQ9BU68 103 aa11.23□□□□□ -0.61
SMC4-204ENST00000462787 COL4A2P08572 1712 aa11.22□□□□□ -0.61
SMC4-204ENST00000462787 A0A1B0GUV1 79 aa11.22□□□□□ -0.61
SMC4-204ENST00000462787 LITAFQ99732 161 aa11.21□□□□□ -0.61
SMC4-204ENST00000462787 BDP1A6H8Y1 2624 aa11.21□□□□□ -0.62
SMC4-204ENST00000462787 SEC61GP60059 68 aa11.21□□□□□ -0.62
SMC4-204ENST00000462787 FHL2Q14192 279 aa11.2□□□□□ -0.62
SMC4-204ENST00000462787 WFDC10AQ9H1F0 79 aa11.2□□□□□ -0.62
SMC4-204ENST00000462787 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
SMC4-204ENST00000462787 C14orf177Q52M58 125 aa11.19□□□□□ -0.62
SMC4-204ENST00000462787 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
SMC4-204ENST00000462787 LINC00208Q96KT6 92 aa11.18□□□□□ -0.62
SMC4-204ENST00000462787 PSPHP1O15172 72 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms