RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 XGP55808 180 aa12.02□□□□□ -0.49
ACTB-207ENST00000462494 MEIG1Q5JSS6 88 aa12.02□□□□□ -0.49
ACTB-207ENST00000462494 FAM19A3Q7Z5A8 133 aa12.02□□□□□ -0.49
ACTB-207ENST00000462494 PRIMA1Q86XR5 153 aa12.02□□□□□ -0.49
ACTB-207ENST00000462494 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.49
ACTB-207ENST00000462494 RNF183Q96D59 192 aa12.02□□□□□ -0.49
ACTB-207ENST00000462494 ANK3Q12955 4377 aaKnown RBP12.01□□□□□ -0.49
ACTB-207ENST00000462494 TRBV10-2A0A0K0K1G8 114 aa12.01□□□□□ -0.49
ACTB-207ENST00000462494 IGKV3OR2-268A0A0C4DH90 116 aa12□□□□□ -0.49
ACTB-207ENST00000462494 TEX49A0A1B0GTD5 131 aa11.99□□□□□ -0.49
ACTB-207ENST00000462494 CSNK1G2-AS1Q8NCQ2 148 aa11.99□□□□□ -0.49
ACTB-207ENST00000462494 F5H768 121 aa11.99□□□□□ -0.49
ACTB-207ENST00000462494 CIDEAO60543 219 aa11.99□□□□□ -0.49
ACTB-207ENST00000462494 GAGE6Q13070 117 aa11.99□□□□□ -0.49
ACTB-207ENST00000462494 C2orf82Q6UX34 121 aa11.99□□□□□ -0.49
ACTB-207ENST00000462494 TRBV6-4A0A1B0GX49 114 aa11.98□□□□□ -0.49
ACTB-207ENST00000462494 ITPR2Q14571 2701 aa11.98□□□□□ -0.49
ACTB-207ENST00000462494 H7C423 109 aa11.98□□□□□ -0.49
ACTB-207ENST00000462494 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
ACTB-207ENST00000462494 TMEM262E9PQX1 116 aa11.97□□□□□ -0.49
ACTB-207ENST00000462494 OVOL2Q9BRP0 275 aa11.97□□□□□ -0.49
ACTB-207ENST00000462494 SOSTDC1Q6X4U4 206 aa11.96□□□□□ -0.49
ACTB-207ENST00000462494 LST1O00453 97 aa11.95□□□□□ -0.5
ACTB-207ENST00000462494 UBE2WQ96B02 151 aa11.95□□□□□ -0.5
ACTB-207ENST00000462494 FHL2Q14192 279 aa11.95□□□□□ -0.5
ACTB-207ENST00000462494 DEFB130BP0DP73 79 aa11.94□□□□□ -0.5
ACTB-207ENST00000462494 DEFB130AP0DP74 79 aa11.94□□□□□ -0.5
ACTB-207ENST00000462494 HILS1P60008 231 aa11.94□□□□□ -0.5
ACTB-207ENST00000462494 COPS9Q8WXC6 57 aa11.94□□□□□ -0.5
ACTB-207ENST00000462494 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
ACTB-207ENST00000462494 HERV-K104P63124 156 aa11.94□□□□□ -0.5
ACTB-207ENST00000462494 TOMM7Q9P0U1 55 aa11.94□□□□□ -0.5
ACTB-207ENST00000462494 IGLV4-60A0A075B6I1 120 aa11.93□□□□□ -0.5
ACTB-207ENST00000462494 CKS1BP61024 79 aa11.93□□□□□ -0.5
ACTB-207ENST00000462494 SMR3AQ99954 134 aa11.93□□□□□ -0.5
ACTB-207ENST00000462494 TRBV6-8A0A0A6YYG3 113 aa11.92□□□□□ -0.5
ACTB-207ENST00000462494 A0A1B0GV72 72 aa11.92□□□□□ -0.5
ACTB-207ENST00000462494 PF4P02776 101 aa11.92□□□□□ -0.5
ACTB-207ENST00000462494 H3BT86 120 aa11.91□□□□□ -0.5
ACTB-207ENST00000462494 LINC01600Q96MT4 127 aa11.91□□□□□ -0.5
ACTB-207ENST00000462494 TRAV8-4A0A0B4J246 113 aa11.91□□□□□ -0.5
ACTB-207ENST00000462494 COX7B2Q8TF08 81 aa11.91□□□□□ -0.5
ACTB-207ENST00000462494 CRLF1O75462 422 aa11.9□□□□□ -0.51
ACTB-207ENST00000462494 KRTAP10-3P60369 221 aa11.89□□□□□ -0.51
ACTB-207ENST00000462494 COX7A2LO14548 114 aa11.88□□□□□ -0.51
ACTB-207ENST00000462494 FN1P02751 2386 aaKnown RBP11.87□□□□□ -0.51
ACTB-207ENST00000462494 HIVEP2P31629 2446 aa11.87□□□□□ -0.51
ACTB-207ENST00000462494 J3QKU1 62 aa11.87□□□□□ -0.51
ACTB-207ENST00000462494 MIR7-3HGQ8N6C7 128 aa11.87□□□□□ -0.51
ACTB-207ENST00000462494 SHISA2Q6UWI4 295 aa11.86□□□□□ -0.51
ACTB-207ENST00000462494 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
ACTB-207ENST00000462494 HELZ2Q9BYK8 2649 aaKnown RBP11.85□□□□□ -0.51
ACTB-207ENST00000462494 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
ACTB-207ENST00000462494 SNCGO76070 127 aa11.85□□□□□ -0.51
ACTB-207ENST00000462494 GYPEP15421 78 aa11.85□□□□□ -0.51
ACTB-207ENST00000462494 LINC00158P58513 81 aa11.85□□□□□ -0.51
ACTB-207ENST00000462494 IGHV3OR16-9A0A0B4J2B5 98 aa11.84□□□□□ -0.51
ACTB-207ENST00000462494 GCN1Q92616 2671 aaKnown RBP11.84□□□□□ -0.51
ACTB-207ENST00000462494 LINC00482Q8N8I6 264 aa11.84□□□□□ -0.51
ACTB-207ENST00000462494 NBEAL2Q6ZNJ1 2754 aa11.83□□□□□ -0.51
ACTB-207ENST00000462494 A0A096LPF7 62 aa11.83□□□□□ -0.52
ACTB-207ENST00000462494 KIR2DL5BQ8NHK3 375 aa11.83□□□□□ -0.52
ACTB-207ENST00000462494 FASNP49327 2511 aaKnown RBP11.83□□□□□ -0.52
ACTB-207ENST00000462494 C11orf68Q9H3H3 251 aaKnown RBP11.83□□□□□ -0.52
ACTB-207ENST00000462494 CITED1Q99966 193 aa11.82□□□□□ -0.52
ACTB-207ENST00000462494 SND1-IT1Q9HBX3 110 aa11.82□□□□□ -0.52
ACTB-207ENST00000462494 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
ACTB-207ENST00000462494 CRPP02741 224 aa11.82□□□□□ -0.52
ACTB-207ENST00000462494 PFN2P35080 140 aa11.82□□□□□ -0.52
ACTB-207ENST00000462494 A0A087WZ39 114 aa11.81□□□□□ -0.52
ACTB-207ENST00000462494 TRAV13-2A0A0B4J235 113 aa11.81□□□□□ -0.52
ACTB-207ENST00000462494 XCL1P47992 114 aa11.8□□□□□ -0.52
ACTB-207ENST00000462494 CLPSL2Q6UWE3 100 aa11.8□□□□□ -0.52
ACTB-207ENST00000462494 C15orf53Q8NAA6 179 aa11.8□□□□□ -0.52
ACTB-207ENST00000462494 X6R8D5 127 aa11.8□□□□□ -0.52
ACTB-207ENST00000462494 LINC00337Q8N6G1 96 aa11.8□□□□□ -0.52
ACTB-207ENST00000462494 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
ACTB-207ENST00000462494 GAGE2EQ4V326 116 aa11.79□□□□□ -0.52
ACTB-207ENST00000462494 SPATA3Q8NHX4 192 aa11.79□□□□□ -0.52
ACTB-207ENST00000462494 FAM218AQ96MZ4 157 aa11.79□□□□□ -0.52
ACTB-207ENST00000462494 GAGE2DQ9UEU5 116 aa11.79□□□□□ -0.52
ACTB-207ENST00000462494 IGKV2-28A0A075B6P5 120 aa11.79□□□□□ -0.52
ACTB-207ENST00000462494 IGKV2D-28P01615 120 aa11.79□□□□□ -0.52
ACTB-207ENST00000462494 LINC00612Q8N6U2 182 aa11.79□□□□□ -0.52
ACTB-207ENST00000462494 DEFB4AO15263 64 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 C6orf226Q5I0X4 101 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 PPDPFQ9H3Y8 114 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 LY6G6DO95868 133 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 CCL18P55774 89 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 TTC32Q5I0X7 151 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 FAM222AQ5U5X8 452 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 PRO0255Q9UI72 69 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 VWFP04275 2813 aa11.78□□□□□ -0.52
ACTB-207ENST00000462494 TRACP01848 142 aa11.77□□□□□ -0.53
ACTB-207ENST00000462494 BAALC-AS2P0C853 105 aa11.77□□□□□ -0.53
ACTB-207ENST00000462494 ANAPC13Q9BS18 74 aa11.77□□□□□ -0.53
ACTB-207ENST00000462494 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
ACTB-207ENST00000462494 SS18Q15532 418 aa11.76□□□□□ -0.53
ACTB-207ENST00000462494 PAX4O43316 350 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms