RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FMC1Q96HJ9 113 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 C17orf77Q96MU5 243 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 SLC50A1Q9BRV3 221 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 AAMDCQ9H7C9 122 aa4.31□□□□□ -1.72
SMARCC1-204ENST00000462198 APOBP04114 4563 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 TRBV7-3A0A075B6L6 115 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 TRBV19A0A075B6N1 114 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 A0A096LNJ9 63 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 TRAV13-1A0A0B4J241 112 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 KNCNA6PVL3 124 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 M0R2N4 97 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 SLC25A20O43772 301 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 APOC4P55056 127 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 CACNG7P62955 275 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 RIGQ13278 110 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 Q5XG85 94 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 PCP2Q8IVA1 136 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 ODF3Q96PU9 254 aa4.3□□□□□ -1.72
SMARCC1-204ENST00000462198 FAM236AA0A1B0GUQ0 79 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 FAM236BA0A1B0GV22 79 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 RBAKDNA6NC62 111 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 C16orf90A8MZG2 172 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 F6UB75 175 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 H3BMM0 161 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 H3BT86 120 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 J3QQQ9 107 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 IGKV3-20P01619 116 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 P0DMU3 169 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 FAM231AP0DMU4 169 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 FAM231CP0DMU5 169 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 PLNP26678 52 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 PFN2P35080 140 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 UBE2D1P51668 147 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 DEFB1P60022 68 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 PDE6HQ13956 83 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 COX8CQ7Z4L0 72 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 LINC00643Q86TS7 51 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 C1orf158Q8N1D5 194 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 POM121L12Q8N7R1 296 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 OR8A1Q8NGG7 326 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 UBE2WQ96B02 151 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 LINC00477Q96M19 166 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 CHCHD5Q9BSY4 110 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 APLNQ9ULZ1 77 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 PYGO1Q9Y3Y4 419 aa4.29□□□□□ -1.72
SMARCC1-204ENST00000462198 FLG2Q5D862 2391 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 TRAV12-2A0A075B6T6 113 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 LOC107984156A0A0G2JMH3 177 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 P01737 135 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 TCRAP04437 139 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 PRB4P10163 310 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 MRPS36P82909 103 aaKnown RBP4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 ATXN8Q156A1 80 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 C4orf26Q17RF5 130 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 Q6ZQT7 251 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 ARL17AQ8IVW1 177 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 LYPD1Q8N2G4 141 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 EXOC3-AS1Q8N2X6 119 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 PGLYRP4Q96LB8 373 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 KRTAP3-1Q9BYR8 98 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 AGPAT4-IT1Q9H0P7 198 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 Q9H3A6 140 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 OTORQ9NRC9 128 aa4.28□□□□□ -1.72
SMARCC1-204ENST00000462198 A0A0J9YX75 114 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 A0A1B0GUT8 65 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 PGPA6NDG6 321 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 EPM2AB3EWF7 344 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 M0R3E3 92 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 RBMY1CP0DJD4 496 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 FXYD7P58549 80 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 NANOS2P60321 138 aaKnown RBP4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 NPC2P61916 151 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 CD164Q04900 197 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 DEFB135Q30KP9 77 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 Q86TA4 180 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 MRPL53Q96EL3 112 aaKnown RBP4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 SERP1Q9Y6X1 66 aa4.27□□□□□ -1.73
SMARCC1-204ENST00000462198 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 TRBV10-2A0A0K0K1G8 114 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 PRAC2D3DTV9 90 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 H3BVH4 76 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 ZNF138P52744 262 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 Q75L30 129 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 C8orf49Q96NF6 230 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 XCL2Q9UBD3 114 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 HHLA3Q9XRX5 114 aa4.26□□□□□ -1.73
SMARCC1-204ENST00000462198 IGKV2-40A0A087WW87 121 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 LINC01549A6NIU2 74 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 H7C1H1 209 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 TCL1BO95988 128 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 IGKV2D-40P01614 121 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 FCER1GP30273 86 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 LEPP41159 167 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 ATP5EP56381 51 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 HIST1H4AP62805 103 aaKnown RBP4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 ERCC8Q13216 396 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 ZNF56Q15929 161 aa4.25□□□□□ -1.73
SMARCC1-204ENST00000462198 SPINK13Q1W4C9 94 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms