RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 ANKRD36CQ5JPF3 1778 aa1.75□□□□□ -2.13
VPS8-215ENST00000460158 COL4A2P08572 1712 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 LAMC1P11047 1609 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 IGLV3-32A0A0A0MS00 114 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 CLPSL1A2RUU4 121 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 FAM223BA6NKX1 122 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 D6R8Y8 96 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 H3BRN7 92 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 FXYD1O00168 92 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 IGLV3-1P01715 115 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 ARMS2P0C7Q2 107 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 COX8AP10176 69 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 CCL3L1P16619 93 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 GCHFRP30047 84 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 SPINT3P49223 89 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 TPRXLQ17RH7 258 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 DEFB121Q5J5C9 76 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 PRR9Q5T870 116 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 MUSTN1Q8IVN3 82 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 SPACA4Q8TDM5 124 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 PSENENQ9NZ42 101 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 TMEM14CQ9P0S9 112 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 ZNF236Q9UL36 1845 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 C1orf167Q5SNV9 1468 aa1.74□□□□□ -2.13
VPS8-215ENST00000460158 CICQ96RK0 1608 aaPredicted RBP1.73□□□□□ -2.13
VPS8-215ENST00000460158 ALKQ9UM73 1620 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 ABCA4P78363 2273 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 IGKV2-24A0A0C4DH68 120 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 RPL37AP61513 92 aaKnown RBP1.73□□□□□ -2.13
VPS8-215ENST00000460158 Q6JHZ5 121 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 PRR15LQ9BU68 103 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 GNG13Q9P2W3 67 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 V9GYV3 84 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 IFT172Q9UG01 1749 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 DOCK10Q96BY6 2186 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 NKTRP30414 1462 aaKnown RBP1.73□□□□□ -2.13
VPS8-215ENST00000460158 COL4A1P02462 1669 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 NHSQ6T4R5 1651 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 ALS2Q96Q42 1657 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 PAPPAQ13219 1627 aa1.73□□□□□ -2.13
VPS8-215ENST00000460158 TOP2AP11388 1531 aaKnown RBP1.72□□□□□ -2.13
VPS8-215ENST00000460158 F8VRH5 84 aa1.72□□□□□ -2.13
VPS8-215ENST00000460158 H3BVH4 76 aa1.72□□□□□ -2.13
VPS8-215ENST00000460158 ATP5EP2Q5VTU8 51 aa1.72□□□□□ -2.13
VPS8-215ENST00000460158 HILPDAQ9Y5L2 63 aa1.72□□□□□ -2.13
VPS8-215ENST00000460158 FMN2Q9NZ56 1722 aa1.71□□□□□ -2.13
VPS8-215ENST00000460158 NCOA6Q14686 2063 aaPredicted RBP1.71□□□□□ -2.13
VPS8-215ENST00000460158 SYCP2Q9BX26 1530 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 DNAJC13O75165 2243 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 SHANK1Q9Y566 2161 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 NESP48681 1621 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 TRGV4A0A0C4DH28 118 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 CTXND1A0A1B0GTU2 59 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 A0A1W2PNN7 141 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 IFI27P40305 119 aaPredicted RBP1.71□□□□□ -2.14
VPS8-215ENST00000460158 CCL18P55774 89 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 BAGE2Q86Y30 109 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 CDC42BPGQ6DT37 1551 aa1.71□□□□□ -2.14
VPS8-215ENST00000460158 PRXQ9BXM0 1461 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 FN1P02751 2386 aaKnown RBP1.7□□□□□ -2.14
VPS8-215ENST00000460158 IGKV2-40A0A087WW87 121 aaPredicted RBP1.7□□□□□ -2.14
VPS8-215ENST00000460158 IGKV3D-7A0A0C4DH55 119 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 IGKV3OR2-268A0A0C4DH90 116 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 TRBV6-5A0A0K0K1A5 114 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 M0R3E3 92 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 UQCR11O14957 56 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 IGKV2D-40P01614 121 aaPredicted RBP1.7□□□□□ -2.14
VPS8-215ENST00000460158 C3orf79P0CE67 100 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 GLI2P10070 1586 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 RNASE3P12724 160 aaKnown RBP1.7□□□□□ -2.14
VPS8-215ENST00000460158 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 LINC00322Q6ZN03 302 aaPredicted RBP1.7□□□□□ -2.14
VPS8-215ENST00000460158 PROK2Q9HC23 129 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 LINC01558Q9Y6Z2 57 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 CLASP1Q7Z460 1538 aa1.7□□□□□ -2.14
VPS8-215ENST00000460158 RALGAPBQ86X10 1494 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 RICTORQ6R327 1708 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 C10orf142B7Z368 130 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 M0R135 149 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 MGPP08493 103 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 IL9P15248 144 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 FXYD3Q14802 87 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 BAGE3Q86Y29 109 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 FDCSPQ8NFU4 85 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 ZNF563Q8TA94 476 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 TXNDC17Q9BRA2 123 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 TTTY12Q9BZ98 90 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 INTS1Q8N201 2190 aaKnown RBP1.69□□□□□ -2.14
VPS8-215ENST00000460158 USP32Q8NFA0 1604 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 PHRF1Q9P1Y6 1649 aaKnown RBP1.69□□□□□ -2.14
VPS8-215ENST00000460158 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
VPS8-215ENST00000460158 MAST1Q9Y2H9 1570 aa1.68□□□□□ -2.14
VPS8-215ENST00000460158 CEP170BQ9Y4F5 1589 aaPredicted RBP1.68□□□□□ -2.14
VPS8-215ENST00000460158 A0A087WVE0 104 aa1.68□□□□□ -2.14
VPS8-215ENST00000460158 IGKV2-29A2NJV5 120 aaPredicted RBP1.68□□□□□ -2.14
VPS8-215ENST00000460158 DEFB132Q7Z7B7 95 aa1.68□□□□□ -2.14
VPS8-215ENST00000460158 COA5Q86WW8 74 aa1.68□□□□□ -2.14
VPS8-215ENST00000460158 UBE2D4Q9Y2X8 147 aa1.68□□□□□ -2.14
VPS8-215ENST00000460158 VWDEQ8N2E2 1590 aa1.68□□□□□ -2.14
VPS8-215ENST00000460158 PAPPA2Q9BXP8 1791 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms