RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 PPDPFLQ8WWR9 84 aa12.87□□□□□ -0.35
HPS3-202ENST00000460120 ICOSQ9Y6W8 199 aa12.87□□□□□ -0.35
HPS3-202ENST00000460120 VWFP04275 2813 aa12.87□□□□□ -0.35
HPS3-202ENST00000460120 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
HPS3-202ENST00000460120 SMIM1B2RUZ4 78 aa12.86□□□□□ -0.35
HPS3-202ENST00000460120 CDC42SE2Q9NRR3 84 aa12.86□□□□□ -0.35
HPS3-202ENST00000460120 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
HPS3-202ENST00000460120 NDUFA1O15239 70 aa12.86□□□□□ -0.35
HPS3-202ENST00000460120 PRIMA1Q86XR5 153 aa12.86□□□□□ -0.35
HPS3-202ENST00000460120 TMEM243Q9BU79 118 aa12.86□□□□□ -0.35
HPS3-202ENST00000460120 ATXN8Q156A1 80 aa12.85□□□□□ -0.35
HPS3-202ENST00000460120 TOMM7Q9P0U1 55 aa12.85□□□□□ -0.35
HPS3-202ENST00000460120 PF4P02776 101 aa12.85□□□□□ -0.35
HPS3-202ENST00000460120 KRTAP10-3P60369 221 aa12.85□□□□□ -0.35
HPS3-202ENST00000460120 IGLV5-45A0A087WSX0 123 aa12.84□□□□□ -0.35
HPS3-202ENST00000460120 LINC01620Q4KN68 170 aa12.84□□□□□ -0.35
HPS3-202ENST00000460120 ATP6V0E2Q8NHE4 81 aa12.84□□□□□ -0.35
HPS3-202ENST00000460120 NTN5Q8WTR8 489 aaPredicted RBP12.84□□□□□ -0.35
HPS3-202ENST00000460120 CDIP1Q9H305 208 aa12.84□□□□□ -0.35
HPS3-202ENST00000460120 C16orf95Q9H693 158 aa12.84□□□□□ -0.35
HPS3-202ENST00000460120 J3QKU1 62 aa12.83□□□□□ -0.35
HPS3-202ENST00000460120 CIRBPQ14011 172 aaKnown RBP12.83□□□□□ -0.35
HPS3-202ENST00000460120 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.35
HPS3-202ENST00000460120 A0A096LPF7 62 aa12.83□□□□□ -0.36
HPS3-202ENST00000460120 SBSPONQ8IVN8 264 aa12.83□□□□□ -0.36
HPS3-202ENST00000460120 CHCHD5Q9BSY4 110 aa12.83□□□□□ -0.36
HPS3-202ENST00000460120 MT-ATP8P03928 68 aa12.82□□□□□ -0.36
HPS3-202ENST00000460120 SPATA3Q8NHX4 192 aa12.82□□□□□ -0.36
HPS3-202ENST00000460120 HILS1P60008 231 aa12.82□□□□□ -0.36
HPS3-202ENST00000460120 LINC00308Q8TCZ7 52 aa12.82□□□□□ -0.36
HPS3-202ENST00000460120 IGLV4-60A0A075B6I1 120 aa12.82□□□□□ -0.36
HPS3-202ENST00000460120 TEX49A0A1B0GTD5 131 aa12.81□□□□□ -0.36
HPS3-202ENST00000460120 CRLF1O75462 422 aa12.81□□□□□ -0.36
HPS3-202ENST00000460120 IGLV5-39A0A0G2JS06 123 aa12.81□□□□□ -0.36
HPS3-202ENST00000460120 TRBV30A0A0K0K1B3 111 aa12.81□□□□□ -0.36
HPS3-202ENST00000460120 SOSTDC1Q6X4U4 206 aa12.81□□□□□ -0.36
HPS3-202ENST00000460120 DEFB4AO15263 64 aa12.8□□□□□ -0.36
HPS3-202ENST00000460120 XGP55808 180 aa12.8□□□□□ -0.36
HPS3-202ENST00000460120 B5MCH6 92 aa12.8□□□□□ -0.36
HPS3-202ENST00000460120 LINC00482Q8N8I6 264 aa12.8□□□□□ -0.36
HPS3-202ENST00000460120 C11orf68Q9H3H3 251 aaKnown RBP12.8□□□□□ -0.36
HPS3-202ENST00000460120 F5H768 121 aa12.79□□□□□ -0.36
HPS3-202ENST00000460120 FHL2Q14192 279 aa12.79□□□□□ -0.36
HPS3-202ENST00000460120 COX6CP09669 75 aa12.78□□□□□ -0.36
HPS3-202ENST00000460120 CMC4P56277 68 aaPredicted RBP12.78□□□□□ -0.36
HPS3-202ENST00000460120 CLPSL2Q6UWE3 100 aa12.78□□□□□ -0.36
HPS3-202ENST00000460120 C2orf82Q6UX34 121 aa12.77□□□□□ -0.36
HPS3-202ENST00000460120 TRBV6-4A0A1B0GX49 114 aa12.77□□□□□ -0.37
HPS3-202ENST00000460120 CSDC2Q9Y534 153 aaKnown RBP12.77□□□□□ -0.37
HPS3-202ENST00000460120 SMIM20Q8N5G0 67 aa12.76□□□□□ -0.37
HPS3-202ENST00000460120 TIMM17BO60830 172 aa12.76□□□□□ -0.37
HPS3-202ENST00000460120 C5orf38Q86SI9 138 aa12.76□□□□□ -0.37
HPS3-202ENST00000460120 TMEM262E9PQX1 116 aa12.75□□□□□ -0.37
HPS3-202ENST00000460120 H7C423 109 aa12.75□□□□□ -0.37
HPS3-202ENST00000460120 IFITM1P13164 125 aa12.75□□□□□ -0.37
HPS3-202ENST00000460120 FAM110AQ9BQ89 295 aa12.75□□□□□ -0.37
HPS3-202ENST00000460120 TENM1Q9UKZ4 2725 aa12.75□□□□□ -0.37
HPS3-202ENST00000460120 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
HPS3-202ENST00000460120 TRBV6-8A0A0A6YYG3 113 aa12.75□□□□□ -0.37
HPS3-202ENST00000460120 OVOL2Q9BRP0 275 aa12.75□□□□□ -0.37
HPS3-202ENST00000460120 TRBV10-2A0A0K0K1G8 114 aa12.74□□□□□ -0.37
HPS3-202ENST00000460120 LY6G6DO95868 133 aa12.74□□□□□ -0.37
HPS3-202ENST00000460120 GYPEP15421 78 aa12.74□□□□□ -0.37
HPS3-202ENST00000460120 ANAPC13Q9BS18 74 aa12.73□□□□□ -0.37
HPS3-202ENST00000460120 COX7B2Q8TF08 81 aa12.72□□□□□ -0.37
HPS3-202ENST00000460120 PFN2P35080 140 aa12.71□□□□□ -0.37
HPS3-202ENST00000460120 INAFM1C9JVW0 142 aa12.71□□□□□ -0.38
HPS3-202ENST00000460120 UBE2WQ96B02 151 aa12.71□□□□□ -0.38
HPS3-202ENST00000460120 MIR7-3HGQ8N6C7 128 aa12.7□□□□□ -0.38
HPS3-202ENST00000460120 LST1O00453 97 aa12.7□□□□□ -0.38
HPS3-202ENST00000460120 XCL1P47992 114 aa12.7□□□□□ -0.38
HPS3-202ENST00000460120 LINC00158P58513 81 aa12.7□□□□□ -0.38
HPS3-202ENST00000460120 FAM19A3Q7Z5A8 133 aa12.7□□□□□ -0.38
HPS3-202ENST00000460120 DEFB135Q30KP9 77 aa12.69□□□□□ -0.38
HPS3-202ENST00000460120 FAM222AQ5U5X8 452 aa12.67□□□□□ -0.38
HPS3-202ENST00000460120 KMT2BQ9UMN6 2715 aaPredicted RBP12.66□□□□□ -0.38
HPS3-202ENST00000460120 ATRQ13535 2644 aa12.66□□□□□ -0.38
HPS3-202ENST00000460120 TRAV8-4A0A0B4J246 113 aa12.66□□□□□ -0.38
HPS3-202ENST00000460120 Q8N3U1 123 aa12.66□□□□□ -0.38
HPS3-202ENST00000460120 X6R8D5 127 aa12.66□□□□□ -0.38
HPS3-202ENST00000460120 TRRAPQ9Y4A5 3859 aa12.65□□□□□ -0.38
HPS3-202ENST00000460120 NHLRC4P0CG21 123 aaPredicted RBP12.64□□□□□ -0.39
HPS3-202ENST00000460120 IGHV3OR16-9A0A0B4J2B5 98 aa12.64□□□□□ -0.39
HPS3-202ENST00000460120 LINC00959A0A1B0GUT2 108 aa12.63□□□□□ -0.39
HPS3-202ENST00000460120 SND1-IT1Q9HBX3 110 aa12.63□□□□□ -0.39
HPS3-202ENST00000460120 IGLV10-54A0A075B6I4 117 aa12.63□□□□□ -0.39
HPS3-202ENST00000460120 HTN3P15516 51 aa12.63□□□□□ -0.39
HPS3-202ENST00000460120 COX7A2LO14548 114 aa12.62□□□□□ -0.39
HPS3-202ENST00000460120 FAM218AQ96MZ4 157 aa12.62□□□□□ -0.39
HPS3-202ENST00000460120 LINC00337Q8N6G1 96 aa12.62□□□□□ -0.39
HPS3-202ENST00000460120 Q9HAA7 133 aa12.62□□□□□ -0.39
HPS3-202ENST00000460120 M0QXV9 152 aa12.61□□□□□ -0.39
HPS3-202ENST00000460120 C6orf226Q5I0X4 101 aa12.61□□□□□ -0.39
HPS3-202ENST00000460120 COPS9Q8WXC6 57 aa12.61□□□□□ -0.39
HPS3-202ENST00000460120 CCDC179H3BU77 68 aa12.61□□□□□ -0.39
HPS3-202ENST00000460120 PAX4O43316 350 aa12.61□□□□□ -0.39
HPS3-202ENST00000460120 H3BT86 120 aa12.61□□□□□ -0.39
HPS3-202ENST00000460120 CRPP02741 224 aa12.61□□□□□ -0.39
HPS3-202ENST00000460120 TTC32Q5I0X7 151 aa12.61□□□□□ -0.39
HPS3-202ENST00000460120 NSD1Q96L73 2696 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms