RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 UBE2D2P62837 147 aa3.89□□□□□ -1.79
DDX1-204ENST00000459706 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
DDX1-204ENST00000459706 HIST3H2BBQ8N257 126 aa3.89□□□□□ -1.79
DDX1-204ENST00000459706 HSPB8Q9UJY1 196 aa3.89□□□□□ -1.79
DDX1-204ENST00000459706 ICOSQ9Y6W8 199 aa3.89□□□□□ -1.79
DDX1-204ENST00000459706 TRBV25-1A0A075B6N4 114 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 DEFB131BA0A096LNP1 70 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 LEPROTL1O95214 131 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 P0DMU3 169 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 FAM231AP0DMU4 169 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 FAM231CP0DMU5 169 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 HTN3P15516 51 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 C15orf53Q8NAA6 179 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 ATP6V0E2Q8NHE4 81 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 Q9UF83 564 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 CYSLTR1Q9Y271 337 aa3.88□□□□□ -1.79
DDX1-204ENST00000459706 UBE2L6O14933 153 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 LINC00694P0DN24 101 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 FABP4P15090 132 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 TCTAP57738 103 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 DSCR10P59022 87 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 PDZD11Q5EBL8 140 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 TOMM6Q96B49 74 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 TMEM141Q96I45 108 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 HIST1H2BLQ99880 126 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 MAP1LC3CQ9BXW4 147 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 DNAH9Q9NYC9 4486 aa3.87□□□□□ -1.79
DDX1-204ENST00000459706 HUWE1Q7Z6Z7 4374 aaKnown RBP3.86□□□□□ -1.79
DDX1-204ENST00000459706 TRBV6-8A0A0A6YYG3 113 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 C20orf202A1L168 122 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 NUPR2A6NF83 97 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.86□□□□□ -1.79
DDX1-204ENST00000459706 ZNF25P17030 456 aaPredicted RBP3.86□□□□□ -1.79
DDX1-204ENST00000459706 Q6ZN92 141 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 NEGR1Q7Z3B1 354 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 FAM19A2Q8N3H0 131 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 C20orf203Q8NBC4 194 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 TIMM17AQ99595 171 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 TMEM243Q9BU79 118 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 TIMM21Q9BVV7 248 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 SPANXA1Q9NS26 97 aa3.86□□□□□ -1.79
DDX1-204ENST00000459706 CSDC2Q9Y534 153 aaKnown RBP3.86□□□□□ -1.79
DDX1-204ENST00000459706 TENM3Q9P273 2699 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 A0A096LPF7 62 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 A0A0J9YY99 117 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 NUPR1O60356 82 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 PMCHL1Q16048 86 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 LELP1Q5T871 98 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 IFI27L1Q96BM0 104 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 TMEM101Q96IK0 257 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 SCGB3A1Q96QR1 104 aa3.85□□□□□ -1.79
DDX1-204ENST00000459706 KLK5Q9Y337 293 aaPredicted RBP3.85□□□□□ -1.79
DDX1-204ENST00000459706 A0A096LNJ9 63 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 TRAV12-1A0A0B4J245 112 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 TRAV8-6A0A0B4J262 113 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 KRTDAPP60985 99 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 MRPS36P82909 103 aaKnown RBP3.84□□□□□ -1.79
DDX1-204ENST00000459706 AMMECR1LQ6DCA0 310 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 SPATA12Q7Z6I5 190 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 MRPL52Q86TS9 123 aaKnown RBP3.84□□□□□ -1.79
DDX1-204ENST00000459706 OR10D4PQ8NGN7 298 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 C2orf88Q9BSF0 95 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 CHCHD7Q9BUK0 85 aa3.84□□□□□ -1.79
DDX1-204ENST00000459706 LOC105371267A0A1B0GV96 52 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 IGIPA6NJ69 53 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 SYS1-DBNDD2H3BUS1 97 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 C3orf79P0CE67 100 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 SMIM6P0DI80 62 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 CCL18P55774 89 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 RPL39P62891 51 aaKnown RBP3.83□□□□□ -1.8
DDX1-204ENST00000459706 SEC11AP67812 179 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 PMVKQ15126 192 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 LGALS9CQ6DKI2 356 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 CEMP1Q6PRD7 247 aaPredicted RBP3.83□□□□□ -1.8
DDX1-204ENST00000459706 LYPD5Q6UWN5 251 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 TEX43Q6ZNM6 134 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 NTM-AS1Q6ZSK4 140 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 OR5A1Q8NGJ0 315 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 UBE2D4Q9Y2X8 147 aa3.83□□□□□ -1.8
DDX1-204ENST00000459706 PRKDCP78527 4128 aaKnown RBP3.82□□□□□ -1.8
DDX1-204ENST00000459706 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.82□□□□□ -1.8
DDX1-204ENST00000459706 A0A087WX48 190 aa3.82□□□□□ -1.8
DDX1-204ENST00000459706 IGKV2-29A2NJV5 120 aaPredicted RBP3.82□□□□□ -1.8
DDX1-204ENST00000459706 IGLL5B9A064 214 aa3.82□□□□□ -1.8
DDX1-204ENST00000459706 K7EP13 123 aa3.82□□□□□ -1.8
DDX1-204ENST00000459706 CCL25O15444 150 aa3.82□□□□□ -1.8
DDX1-204ENST00000459706 FGF6P10767 208 aa3.82□□□□□ -1.8
DDX1-204ENST00000459706 PLNP26678 52 aa3.82□□□□□ -1.8
DDX1-204ENST00000459706 JOSD1Q15040 202 aaPredicted RBP3.82□□□□□ -1.8
DDX1-204ENST00000459706 NKAPP1Q8N9T2 125 aa3.82□□□□□ -1.8
DDX1-204ENST00000459706 BAALCQ8WXS3 180 aa3.82□□□□□ -1.8
DDX1-204ENST00000459706 HSBP1L1C9JCN9 74 aa3.81□□□□□ -1.8
DDX1-204ENST00000459706 TMEM262E9PQX1 116 aa3.81□□□□□ -1.8
DDX1-204ENST00000459706 F8VRH5 84 aa3.81□□□□□ -1.8
DDX1-204ENST00000459706 S100A12P80511 92 aa3.81□□□□□ -1.8
DDX1-204ENST00000459706 LINC01545Q5VT33 79 aa3.81□□□□□ -1.8
DDX1-204ENST00000459706 ZNF664Q8N3J9 261 aa3.81□□□□□ -1.8
DDX1-204ENST00000459706 CHCHD10Q8WYQ3 142 aaPredicted RBP3.81□□□□□ -1.8
DDX1-204ENST00000459706 AMELXQ99217 191 aa3.81□□□□□ -1.8
DDX1-204ENST00000459706 UPK3BQ9BT76 320 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms