RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 HMGN4O00479 90 aa-1.92□□□□□ -2.72
SNORD42A-201ENST00000459584 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.92□□□□□ -2.72
SNORD42A-201ENST00000459584 MYOM1P52179 1685 aa-1.93□□□□□ -2.72
SNORD42A-201ENST00000459584 PKD1P98161 4303 aa-1.93□□□□□ -2.72
SNORD42A-201ENST00000459584 TRBV7-3A0A075B6L6 115 aa-1.93□□□□□ -2.72
SNORD42A-201ENST00000459584 LINC00959A0A1B0GUT2 108 aa-1.93□□□□□ -2.72
SNORD42A-201ENST00000459584 C12orf73Q69YU5 71 aa-1.93□□□□□ -2.72
SNORD42A-201ENST00000459584 MAFIPQ8WZ33 124 aa-1.93□□□□□ -2.72
SNORD42A-201ENST00000459584 SFT2D2O95562 160 aa-1.94□□□□□ -2.72
SNORD42A-201ENST00000459584 CCDC167Q9P0B6 97 aa-1.94□□□□□ -2.72
SNORD42A-201ENST00000459584 APLNQ9ULZ1 77 aa-1.94□□□□□ -2.72
SNORD42A-201ENST00000459584 ARHGEF5Q12774 1597 aa-1.94□□□□□ -2.72
SNORD42A-201ENST00000459584 CFTRP13569 1480 aa-1.94□□□□□ -2.72
SNORD42A-201ENST00000459584 ITPR3Q14573 2671 aa-1.95□□□□□ -2.72
SNORD42A-201ENST00000459584 ANP32BQ92688 251 aaKnown RBP-1.95□□□□□ -2.72
SNORD42A-201ENST00000459584 HTTP42858 3142 aa-1.95□□□□□ -2.72
SNORD42A-201ENST00000459584 GRIN2AQ12879 1464 aa-1.95□□□□□ -2.72
SNORD42A-201ENST00000459584 PAPPA2Q9BXP8 1791 aa-1.95□□□□□ -2.72
SNORD42A-201ENST00000459584 SMIM21Q3B7S5 101 aa-1.96□□□□□ -2.72
SNORD42A-201ENST00000459584 C10orf113Q5VZT2 155 aa-1.96□□□□□ -2.72
SNORD42A-201ENST00000459584 FAT3Q8TDW7 4589 aa-1.97□□□□□ -2.72
SNORD42A-201ENST00000459584 COX8AP10176 69 aa-1.97□□□□□ -2.72
SNORD42A-201ENST00000459584 TMEM263Q8WUH6 116 aaKnown RBP-1.97□□□□□ -2.72
SNORD42A-201ENST00000459584 PHLPP1O60346 1717 aa-1.97□□□□□ -2.73
SNORD42A-201ENST00000459584 FOCADQ5VW36 1801 aa-1.98□□□□□ -2.73
SNORD42A-201ENST00000459584 SHROOM2Q13796 1616 aa-1.98□□□□□ -2.73
SNORD42A-201ENST00000459584 MAGI1Q96QZ7 1491 aaPredicted RBP-1.98□□□□□ -2.73
SNORD42A-201ENST00000459584 KNL1Q8NG31 2342 aa-1.98□□□□□ -2.73
SNORD42A-201ENST00000459584 MGPP08493 103 aa-1.98□□□□□ -2.73
SNORD42A-201ENST00000459584 AKAP14Q86UN6 197 aa-1.98□□□□□ -2.73
SNORD42A-201ENST00000459584 HECTD1Q9ULT8 2610 aa-1.98□□□□□ -2.73
SNORD42A-201ENST00000459584 SONP18583 2426 aaKnown RBP-1.98□□□□□ -2.73
SNORD42A-201ENST00000459584 COPS9Q8WXC6 57 aa-1.99□□□□□ -2.73
SNORD42A-201ENST00000459584 SERP1Q9Y6X1 66 aa-1.99□□□□□ -2.73
SNORD42A-201ENST00000459584 PRRC2CQ9Y520 2896 aaKnown RBP-1.99□□□□□ -2.73
SNORD42A-201ENST00000459584 SETBP1Q9Y6X0 1596 aa-1.99□□□□□ -2.73
SNORD42A-201ENST00000459584 LOC285095A0A1B0GVY8 99 aa-2□□□□□ -2.73
SNORD42A-201ENST00000459584 MRPL54Q6P161 138 aaKnown RBP-2□□□□□ -2.73
SNORD42A-201ENST00000459584 FDCSPQ8NFU4 85 aa-2□□□□□ -2.73
SNORD42A-201ENST00000459584 USMG5Q96IX5 58 aa-2.01□□□□□ -2.73
SNORD42A-201ENST00000459584 RERGLQ9H628 205 aa-2.01□□□□□ -2.73
SNORD42A-201ENST00000459584 SCN7AQ01118 1682 aa-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 CPSF4LA6NMK7 179 aaKnown RBP-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 IFNGP01579 166 aa-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 IGLC1P0CG04 106 aa-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 UBA52P62987 128 aaKnown RBP-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 SPRR4Q96PI1 79 aa-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 AKAP9Q99996 3911 aa-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 DNAH3Q8TD57 4116 aa-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 CPSF1Q10570 1443 aaKnown RBP-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 TET3O43151 1660 aa-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 ROBO1Q9Y6N7 1651 aa-2.02□□□□□ -2.73
SNORD42A-201ENST00000459584 DEFB112Q30KQ8 113 aa-2.03□□□□□ -2.73
SNORD42A-201ENST00000459584 LINC01600Q96MT4 127 aa-2.03□□□□□ -2.73
SNORD42A-201ENST00000459584 NAA60Q9H7X0 242 aa-2.03□□□□□ -2.73
SNORD42A-201ENST00000459584 NXT2Q9NPJ8 142 aaKnown RBP-2.03□□□□□ -2.73
SNORD42A-201ENST00000459584 FAIMQ9NVQ4 179 aa-2.03□□□□□ -2.73
SNORD42A-201ENST00000459584 ARPC4P59998 168 aa-2.04□□□□□ -2.74
SNORD42A-201ENST00000459584 PKHD1L1Q86WI1 4243 aa-2.05□□□□□ -2.74
SNORD42A-201ENST00000459584 REV3LO60673 3130 aa-2.05□□□□□ -2.74
SNORD42A-201ENST00000459584 VPS13DQ5THJ4 4388 aa-2.05□□□□□ -2.74
SNORD42A-201ENST00000459584 A0A0G2JMZ2 1700 aa-2.05□□□□□ -2.74
SNORD42A-201ENST00000459584 NUP188Q5SRE5 1749 aa-2.05□□□□□ -2.74
SNORD42A-201ENST00000459584 XRN1Q8IZH2 1706 aaKnown RBP-2.05□□□□□ -2.74
SNORD42A-201ENST00000459584 MARF1Q9Y4F3 1742 aaKnown RBP-2.05□□□□□ -2.74
SNORD42A-201ENST00000459584 FASNP49327 2511 aaKnown RBP-2.06□□□□□ -2.74
SNORD42A-201ENST00000459584 MUC17Q685J3 4493 aa-2.06□□□□□ -2.74
SNORD42A-201ENST00000459584 DNAH9Q9NYC9 4486 aa-2.06□□□□□ -2.74
SNORD42A-201ENST00000459584 AKAP13Q12802 2813 aa-2.06□□□□□ -2.74
SNORD42A-201ENST00000459584 CHKB-CPT1BH3BT56 60 aa-2.06□□□□□ -2.74
SNORD42A-201ENST00000459584 DR1Q01658 176 aa-2.06□□□□□ -2.74
SNORD42A-201ENST00000459584 SPANXDQ9BXN6 97 aa-2.06□□□□□ -2.74
SNORD42A-201ENST00000459584 MIF4GDA9UHW6 222 aaKnown RBP-2.07□□□□□ -2.74
SNORD42A-201ENST00000459584 FAM223AQ8IWN6 122 aa-2.07□□□□□ -2.74
SNORD42A-201ENST00000459584 LCN9Q8WX39 176 aa-2.07□□□□□ -2.74
SNORD42A-201ENST00000459584 PPP3R2Q96LZ3 170 aa-2.07□□□□□ -2.74
SNORD42A-201ENST00000459584 MYO18BQ8IUG5 2567 aa-2.07□□□□□ -2.74
SNORD42A-201ENST00000459584 TEP1Q99973 2627 aaKnown RBP-2.08□□□□□ -2.74
SNORD42A-201ENST00000459584 MYOZ3Q8TDC0 251 aa-2.08□□□□□ -2.74
SNORD42A-201ENST00000459584 PFDN5Q99471 154 aa-2.08□□□□□ -2.74
SNORD42A-201ENST00000459584 SNRNP25Q9BV90 132 aaKnown RBP-2.08□□□□□ -2.74
SNORD42A-201ENST00000459584 LINC00474Q9P2X8 69 aa-2.08□□□□□ -2.74
SNORD42A-201ENST00000459584 EPPK1P58107 5090 aaKnown RBP-2.09□□□□□ -2.74
SNORD42A-201ENST00000459584 LYSTQ99698 3801 aa-2.09□□□□□ -2.74
SNORD42A-201ENST00000459584 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.09□□□□□ -2.74
SNORD42A-201ENST00000459584 ARL2-SNX15V9GYD0 113 aa-2.09□□□□□ -2.74
SNORD42A-201ENST00000459584 C1orf167Q5SNV9 1468 aa-2.09□□□□□ -2.74
SNORD42A-201ENST00000459584 ANKRD36A6QL64 1941 aa-2.09□□□□□ -2.74
SNORD42A-201ENST00000459584 PDCD11Q14690 1871 aaKnown RBP-2.09□□□□□ -2.74
SNORD42A-201ENST00000459584 H1FX-AS1Q4G0G2 97 aa-2.1□□□□□ -2.75
SNORD42A-201ENST00000459584 MEIG1Q5JSS6 88 aa-2.1□□□□□ -2.75
SNORD42A-201ENST00000459584 SMG6Q86US8 1419 aaKnown RBP-2.1□□□□□ -2.75
SNORD42A-201ENST00000459584 ZZEF1O43149 2961 aa-2.1□□□□□ -2.75
SNORD42A-201ENST00000459584 WHAMMP3Q1A5X7 153 aa-2.11□□□□□ -2.75
SNORD42A-201ENST00000459584 COMMD6Q7Z4G1 85 aa-2.11□□□□□ -2.75
SNORD42A-201ENST00000459584 FAM167A-AS1Q96KT0 104 aa-2.11□□□□□ -2.75
SNORD42A-201ENST00000459584 CDC42SE2Q9NRR3 84 aa-2.11□□□□□ -2.75
SNORD42A-201ENST00000459584 CATR1Q13166 79 aa-2.12□□□□□ -2.75
SNORD42A-201ENST00000459584 UQCR10Q9UDW1 63 aa-2.12□□□□□ -2.75
SNORD42A-201ENST00000459584 TNRC18O15417 2968 aaPredicted RBP-2.12□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms