RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LECT2O14960 151 aa9.72□□□□□ -0.85
PTPRE-204ENST00000455661 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
PTPRE-204ENST00000455661 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
PTPRE-204ENST00000455661 ATRXP46100 2492 aa9.72□□□□□ -0.85
PTPRE-204ENST00000455661 IL17DQ8TAD2 202 aa9.72□□□□□ -0.85
PTPRE-204ENST00000455661 GNLYP22749 145 aa9.71□□□□□ -0.85
PTPRE-204ENST00000455661 CCL18P55774 89 aa9.71□□□□□ -0.85
PTPRE-204ENST00000455661 STHQ8IWL8 128 aa9.71□□□□□ -0.85
PTPRE-204ENST00000455661 LINC01356Q8N9X3 169 aa9.71□□□□□ -0.86
PTPRE-204ENST00000455661 IBA57-AS1B1ANH7 110 aa9.7□□□□□ -0.86
PTPRE-204ENST00000455661 NCR3O14931 201 aa9.7□□□□□ -0.86
PTPRE-204ENST00000455661 PAX4O43316 350 aa9.7□□□□□ -0.86
PTPRE-204ENST00000455661 Q6ZTI0 123 aa9.7□□□□□ -0.86
PTPRE-204ENST00000455661 C1orf158Q8N1D5 194 aa9.7□□□□□ -0.86
PTPRE-204ENST00000455661 USP17L23D6RBM5 183 aa9.7□□□□□ -0.86
PTPRE-204ENST00000455661 DEFB114Q30KQ6 69 aa9.7□□□□□ -0.86
PTPRE-204ENST00000455661 ORMDL1Q9P0S3 153 aa9.7□□□□□ -0.86
PTPRE-204ENST00000455661 A0A087WVE0 104 aa9.69□□□□□ -0.86
PTPRE-204ENST00000455661 DSCR9P59020 149 aa9.69□□□□□ -0.86
PTPRE-204ENST00000455661 IGKV3OR2-268A0A0C4DH90 116 aa9.68□□□□□ -0.86
PTPRE-204ENST00000455661 J3QLI3 93 aa9.68□□□□□ -0.86
PTPRE-204ENST00000455661 S100A7L2Q5SY68 101 aa9.68□□□□□ -0.86
PTPRE-204ENST00000455661 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
PTPRE-204ENST00000455661 LINC01561Q8N1V8 128 aa9.68□□□□□ -0.86
PTPRE-204ENST00000455661 DPH3Q96FX2 82 aa9.68□□□□□ -0.86
PTPRE-204ENST00000455661 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
PTPRE-204ENST00000455661 PFN2P35080 140 aa9.67□□□□□ -0.86
PTPRE-204ENST00000455661 Q6YL49 198 aa9.67□□□□□ -0.86
PTPRE-204ENST00000455661 UPK3BQ9BT76 320 aa9.67□□□□□ -0.86
PTPRE-204ENST00000455661 VPS13CQ709C8 3753 aa9.67□□□□□ -0.86
PTPRE-204ENST00000455661 SLPIP03973 132 aa9.67□□□□□ -0.86
PTPRE-204ENST00000455661 CCKP06307 115 aa9.67□□□□□ -0.86
PTPRE-204ENST00000455661 C4orf3Q8WVX3 66 aa9.67□□□□□ -0.86
PTPRE-204ENST00000455661 CSPG4Q6UVK1 2322 aa9.66□□□□□ -0.86
PTPRE-204ENST00000455661 CREBBPQ92793 2442 aa9.66□□□□□ -0.86
PTPRE-204ENST00000455661 COL12A1Q99715 3063 aa9.65□□□□□ -0.86
PTPRE-204ENST00000455661 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.86
PTPRE-204ENST00000455661 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
PTPRE-204ENST00000455661 IGHV3OR16-9A0A0B4J2B5 98 aa9.65□□□□□ -0.87
PTPRE-204ENST00000455661 JMJD7-PLA2G4BH0Y9G9 81 aa9.65□□□□□ -0.87
PTPRE-204ENST00000455661 ODF3L2Q3SX64 289 aa9.65□□□□□ -0.87
PTPRE-204ENST00000455661 KIR2DL5BQ8NHK3 375 aa9.65□□□□□ -0.87
PTPRE-204ENST00000455661 MUC6Q6W4X9 2439 aa9.64□□□□□ -0.87
PTPRE-204ENST00000455661 TRGV2A0A075B6R0 118 aa9.64□□□□□ -0.87
PTPRE-204ENST00000455661 A0A087WZ39 114 aa9.64□□□□□ -0.87
PTPRE-204ENST00000455661 ATP5EP2Q5VTU8 51 aa9.64□□□□□ -0.87
PTPRE-204ENST00000455661 LY6G6DO95868 133 aa9.63□□□□□ -0.87
PTPRE-204ENST00000455661 IGF2RP11717 2491 aa9.62□□□□□ -0.87
PTPRE-204ENST00000455661 TRAV25A0A0B4J276 109 aa9.62□□□□□ -0.87
PTPRE-204ENST00000455661 C6orf226Q5I0X4 101 aa9.62□□□□□ -0.87
PTPRE-204ENST00000455661 IGLV4-60A0A075B6I1 120 aa9.62□□□□□ -0.87
PTPRE-204ENST00000455661 LOC100131303A0A0U1RQF7 123 aa9.62□□□□□ -0.87
PTPRE-204ENST00000455661 TMEM86BQ8N661 226 aa9.62□□□□□ -0.87
PTPRE-204ENST00000455661 TRGV4A0A0C4DH28 118 aa9.61□□□□□ -0.87
PTPRE-204ENST00000455661 TMEM256-PLSCR3K7ERE1 68 aa9.61□□□□□ -0.87
PTPRE-204ENST00000455661 DSCR8Q96T75 97 aa9.61□□□□□ -0.87
PTPRE-204ENST00000455661 TRBV6-8A0A0A6YYG3 113 aa9.6□□□□□ -0.87
PTPRE-204ENST00000455661 SS18Q15532 418 aa9.6□□□□□ -0.87
PTPRE-204ENST00000455661 CRYBG3Q68DQ2 2970 aa9.6□□□□□ -0.87
PTPRE-204ENST00000455661 GHRHP01286 108 aa9.6□□□□□ -0.87
PTPRE-204ENST00000455661 C16orf74Q96GX8 76 aa9.6□□□□□ -0.87
PTPRE-204ENST00000455661 LINC00167Q96N53 147 aa9.6□□□□□ -0.87
PTPRE-204ENST00000455661 MAPK1IP1LQ8NDC0 245 aa9.59□□□□□ -0.87
PTPRE-204ENST00000455661 C11orf68Q9H3H3 251 aaKnown RBP9.59□□□□□ -0.87
PTPRE-204ENST00000455661 NDUFC2-KCTD14E9PQ53 114 aa9.58□□□□□ -0.88
PTPRE-204ENST00000455661 NDUFC2O95298 119 aa9.58□□□□□ -0.88
PTPRE-204ENST00000455661 Q8N814 137 aa9.58□□□□□ -0.88
PTPRE-204ENST00000455661 FSHBP01225 129 aa9.57□□□□□ -0.88
PTPRE-204ENST00000455661 HILS1P60008 231 aa9.57□□□□□ -0.88
PTPRE-204ENST00000455661 UBL5Q9BZL1 73 aa9.57□□□□□ -0.88
PTPRE-204ENST00000455661 TRAV23DV6A0A075B6W5 121 aa9.57□□□□□ -0.88
PTPRE-204ENST00000455661 LINC00959A0A1B0GUT2 108 aa9.57□□□□□ -0.88
PTPRE-204ENST00000455661 TRBV10-3A0A0K0K1G6 114 aa9.56□□□□□ -0.88
PTPRE-204ENST00000455661 FHL2Q14192 279 aa9.56□□□□□ -0.88
PTPRE-204ENST00000455661 C11orf44Q8N8P7 122 aa9.56□□□□□ -0.88
PTPRE-204ENST00000455661 ENHOQ6UWT2 76 aa9.56□□□□□ -0.88
PTPRE-204ENST00000455661 WFDC9Q8NEX5 89 aa9.56□□□□□ -0.88
PTPRE-204ENST00000455661 A0A096LNT2 108 aa9.55□□□□□ -0.88
PTPRE-204ENST00000455661 LYPD5Q6UWN5 251 aa9.55□□□□□ -0.88
PTPRE-204ENST00000455661 PLAC8L1A1L4L8 177 aa9.55□□□□□ -0.88
PTPRE-204ENST00000455661 WIPF1O43516 503 aa9.55□□□□□ -0.88
PTPRE-204ENST00000455661 OXTP01178 125 aa9.55□□□□□ -0.88
PTPRE-204ENST00000455661 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
PTPRE-204ENST00000455661 FAM19A1Q7Z5A9 133 aa9.54□□□□□ -0.88
PTPRE-204ENST00000455661 Q8IZM0 81 aa9.54□□□□□ -0.88
PTPRE-204ENST00000455661 SPG11Q96JI7 2443 aa9.54□□□□□ -0.88
PTPRE-204ENST00000455661 XCL1P47992 114 aa9.53□□□□□ -0.88
PTPRE-204ENST00000455661 A0A1W2PRX2 142 aa9.52□□□□□ -0.89
PTPRE-204ENST00000455661 RNASE1P07998 156 aaKnown RBP9.52□□□□□ -0.89
PTPRE-204ENST00000455661 NANOS2P60321 138 aaKnown RBP9.52□□□□□ -0.89
PTPRE-204ENST00000455661 GIG44P09565 113 aaPredicted RBP9.51□□□□□ -0.89
PTPRE-204ENST00000455661 IGHV4-31P0DP07 118 aa9.51□□□□□ -0.89
PTPRE-204ENST00000455661 PRR3P79522 188 aaKnown RBP9.51□□□□□ -0.89
PTPRE-204ENST00000455661 C4orf26Q17RF5 130 aa9.51□□□□□ -0.89
PTPRE-204ENST00000455661 C20orf197Q8N268 126 aa9.51□□□□□ -0.89
PTPRE-204ENST00000455661 CCL24O00175 119 aa9.5□□□□□ -0.89
PTPRE-204ENST00000455661 RPL35AP18077 110 aaKnown RBP9.5□□□□□ -0.89
PTPRE-204ENST00000455661 Q5XG85 94 aa9.5□□□□□ -0.89
PTPRE-204ENST00000455661 MAP1AP78559 2803 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-204ENST00000455661 BCE1O60756 84 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms