RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 MT1HL1P0DM35 61 aa10.28□□□□□ -0.76
NCKIPSD-208ENST00000454134 PTTG1IPP53801 180 aa10.28□□□□□ -0.76
NCKIPSD-208ENST00000454134 MRPS36P82909 103 aaKnown RBP10.28□□□□□ -0.76
NCKIPSD-208ENST00000454134 SPAG11BQ08648 103 aa10.28□□□□□ -0.76
NCKIPSD-208ENST00000454134 A0A0J9YXV3 536 aa10.27□□□□□ -0.77
NCKIPSD-208ENST00000454134 ANAPC16Q96DE5 110 aa10.27□□□□□ -0.77
NCKIPSD-208ENST00000454134 C2orf48Q96LS8 159 aa10.27□□□□□ -0.77
NCKIPSD-208ENST00000454134 IGHV3OR16-9A0A0B4J2B5 98 aa10.26□□□□□ -0.77
NCKIPSD-208ENST00000454134 ORAOV1Q8WV07 137 aa10.26□□□□□ -0.77
NCKIPSD-208ENST00000454134 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
NCKIPSD-208ENST00000454134 IFI27P40305 119 aaPredicted RBP10.25□□□□□ -0.77
NCKIPSD-208ENST00000454134 MAP1LC3AQ9H492 121 aa10.25□□□□□ -0.77
NCKIPSD-208ENST00000454134 IGLV4-3A0A075B6K6 122 aa10.24□□□□□ -0.77
NCKIPSD-208ENST00000454134 A0A1W2PNN7 141 aa10.24□□□□□ -0.77
NCKIPSD-208ENST00000454134 RPL18AQ02543 176 aaKnown RBP10.24□□□□□ -0.77
NCKIPSD-208ENST00000454134 CLLU1Q5K131 121 aa10.24□□□□□ -0.77
NCKIPSD-208ENST00000454134 OR10D4PQ8NGN7 298 aa10.24□□□□□ -0.77
NCKIPSD-208ENST00000454134 PRSS47A8MTI9 375 aa10.23□□□□□ -0.77
NCKIPSD-208ENST00000454134 LAMTOR2Q9Y2Q5 125 aa10.23□□□□□ -0.77
NCKIPSD-208ENST00000454134 PYGO1Q9Y3Y4 419 aa10.23□□□□□ -0.77
NCKIPSD-208ENST00000454134 C10orf25Q5T742 122 aa10.22□□□□□ -0.77
NCKIPSD-208ENST00000454134 ZC2HC1BQ5TFG8 222 aa10.22□□□□□ -0.77
NCKIPSD-208ENST00000454134 Q8N8P6 123 aa10.22□□□□□ -0.77
NCKIPSD-208ENST00000454134 TGIF2-C20orf24A0A0A6YYL0 155 aa10.21□□□□□ -0.77
NCKIPSD-208ENST00000454134 C9orf116Q5BN46 136 aaPredicted RBP10.21□□□□□ -0.77
NCKIPSD-208ENST00000454134 LINC00242Q5T6M2 205 aa10.21□□□□□ -0.77
NCKIPSD-208ENST00000454134 TMEM141Q96I45 108 aa10.21□□□□□ -0.77
NCKIPSD-208ENST00000454134 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.77
NCKIPSD-208ENST00000454134 ADCYAP1P18509 176 aa10.2□□□□□ -0.78
NCKIPSD-208ENST00000454134 RNF151Q2KHN1 245 aa10.2□□□□□ -0.78
NCKIPSD-208ENST00000454134 UNQ6190/PRO20217Q6UXQ8 127 aa10.2□□□□□ -0.78
NCKIPSD-208ENST00000454134 Q6ZRP5 223 aa10.2□□□□□ -0.78
NCKIPSD-208ENST00000454134 CTDSP1Q9GZU7 261 aa10.2□□□□□ -0.78
NCKIPSD-208ENST00000454134 MRPL35Q9NZE8 188 aaKnown RBP10.2□□□□□ -0.78
NCKIPSD-208ENST00000454134 CYSLTR1Q9Y271 337 aa10.2□□□□□ -0.78
NCKIPSD-208ENST00000454134 A0A087WZ39 114 aa10.19□□□□□ -0.78
NCKIPSD-208ENST00000454134 NDUFA1O15239 70 aa10.19□□□□□ -0.78
NCKIPSD-208ENST00000454134 IFITM2Q01629 132 aa10.19□□□□□ -0.78
NCKIPSD-208ENST00000454134 C2orf66Q6UXQ4 117 aa10.19□□□□□ -0.78
NCKIPSD-208ENST00000454134 TEX43Q6ZNM6 134 aa10.19□□□□□ -0.78
NCKIPSD-208ENST00000454134 UBE2D1P51668 147 aa10.18□□□□□ -0.78
NCKIPSD-208ENST00000454134 C6orf48Q9UBA6 75 aa10.18□□□□□ -0.78
NCKIPSD-208ENST00000454134 TMEM218A2RU14 115 aa10.17□□□□□ -0.78
NCKIPSD-208ENST00000454134 F8WDY8 70 aa10.17□□□□□ -0.78
NCKIPSD-208ENST00000454134 KIAA0087Q14695 138 aa10.17□□□□□ -0.78
NCKIPSD-208ENST00000454134 KIAA1644Q3SXP7 199 aa10.17□□□□□ -0.78
NCKIPSD-208ENST00000454134 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
NCKIPSD-208ENST00000454134 PHF5AQ7RTV0 110 aaKnown RBP10.17□□□□□ -0.78
NCKIPSD-208ENST00000454134 HMCN2Q8NDA2 5059 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 SRSF9Q13242 221 aaKnown RBP eCLIP10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 ORMDL2Q53FV1 153 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 UQCC3Q6UW78 93 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 SPINK6Q6UWN8 80 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 Q6ZN92 141 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 LINC01600Q96MT4 127 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 IMMP2LQ96T52 175 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 C2orf88Q9BSF0 95 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 VCX2Q9H322 139 aa10.16□□□□□ -0.78
NCKIPSD-208ENST00000454134 FAM168BA1KXE4 195 aa10.15□□□□□ -0.78
NCKIPSD-208ENST00000454134 IGIPA6NJ69 53 aa10.15□□□□□ -0.78
NCKIPSD-208ENST00000454134 C2orf82Q6UX34 121 aa10.15□□□□□ -0.78
NCKIPSD-208ENST00000454134 AMELXQ99217 191 aa10.15□□□□□ -0.78
NCKIPSD-208ENST00000454134 NXT2Q9NPJ8 142 aaKnown RBP10.15□□□□□ -0.78
NCKIPSD-208ENST00000454134 PSORS1C2Q9UIG4 136 aa10.15□□□□□ -0.78
NCKIPSD-208ENST00000454134 GAGE2EQ4V326 116 aa10.14□□□□□ -0.79
NCKIPSD-208ENST00000454134 GAGE2DQ9UEU5 116 aa10.14□□□□□ -0.79
NCKIPSD-208ENST00000454134 K7EMI3 77 aa10.13□□□□□ -0.79
NCKIPSD-208ENST00000454134 MT-ND6P03923 174 aa10.13□□□□□ -0.79
NCKIPSD-208ENST00000454134 TLX1NBP0CAT3 122 aa10.13□□□□□ -0.79
NCKIPSD-208ENST00000454134 ODF1Q14990 250 aa10.13□□□□□ -0.79
NCKIPSD-208ENST00000454134 REG3GQ6UW15 175 aa10.12□□□□□ -0.79
NCKIPSD-208ENST00000454134 FAM19A5Q7Z5A7 132 aaPredicted RBP10.11□□□□□ -0.79
NCKIPSD-208ENST00000454134 TRAV9-1A0A075B6T8 112 aa10.1□□□□□ -0.79
NCKIPSD-208ENST00000454134 NPSP0C0P6 89 aa10.1□□□□□ -0.79
NCKIPSD-208ENST00000454134 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
NCKIPSD-208ENST00000454134 COMMD7Q86VX2 200 aa10.1□□□□□ -0.79
NCKIPSD-208ENST00000454134 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
NCKIPSD-208ENST00000454134 LINC01561Q8N1V8 128 aa10.1□□□□□ -0.79
NCKIPSD-208ENST00000454134 SEC11CQ9BY50 192 aa10.1□□□□□ -0.79
NCKIPSD-208ENST00000454134 TOMM7Q9P0U1 55 aa10.1□□□□□ -0.79
NCKIPSD-208ENST00000454134 TRBV30A0A0K0K1B3 111 aa10.09□□□□□ -0.79
NCKIPSD-208ENST00000454134 KRTAP7-1Q8IUC3 87 aa10.09□□□□□ -0.79
NCKIPSD-208ENST00000454134 TOMM6Q96B49 74 aa10.09□□□□□ -0.79
NCKIPSD-208ENST00000454134 PACRGQ96M98 296 aaPredicted RBP10.09□□□□□ -0.79
NCKIPSD-208ENST00000454134 PRSS2P07478 247 aa10.08□□□□□ -0.8
NCKIPSD-208ENST00000454134 S100PP25815 95 aa10.08□□□□□ -0.8
NCKIPSD-208ENST00000454134 G0S2P27469 103 aa10.08□□□□□ -0.8
NCKIPSD-208ENST00000454134 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
NCKIPSD-208ENST00000454134 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
NCKIPSD-208ENST00000454134 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
NCKIPSD-208ENST00000454134 TNXBP22105 4242 aa10.08□□□□□ -0.8
NCKIPSD-208ENST00000454134 NDUFC2-KCTD14E9PQ53 114 aa10.07□□□□□ -0.8
NCKIPSD-208ENST00000454134 PAPPA-AS1Q5QFB9 102 aa10.07□□□□□ -0.8
NCKIPSD-208ENST00000454134 FAM19A3Q7Z5A8 133 aa10.07□□□□□ -0.8
NCKIPSD-208ENST00000454134 SCGB3A1Q96QR1 104 aa10.07□□□□□ -0.8
NCKIPSD-208ENST00000454134 ALKBH7Q9BT30 221 aaPredicted RBP10.07□□□□□ -0.8
NCKIPSD-208ENST00000454134 GNB1LQ9BYB4 327 aa10.07□□□□□ -0.8
NCKIPSD-208ENST00000454134 GEMIN7Q9H840 131 aaKnown RBP10.07□□□□□ -0.8
NCKIPSD-208ENST00000454134 CKS1BP61024 79 aa10.06□□□□□ -0.8
NCKIPSD-208ENST00000454134 HERVK_113P63121 156 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms