RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 SVILO95425 2214 aa3.39□□□□□ -1.87
EPHA3-202ENST00000452448 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 A0A0J9YX75 114 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 LY6G6DO95868 133 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 IGKV3-15P01624 115 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 CHTF8P0CG12 524 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 Q86TA4 180 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 CNEP1R1Q8N9A8 125 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 KRTAP4-8Q9BYQ9 185 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 KLK15Q9H2R5 256 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 NAV2Q8IVL1 2488 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 IGHV3-43A0A0B4J1X8 118 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 SRRM5B3KS81 715 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 PRCDQ00LT1 54 aa3.38□□□□□ -1.87
EPHA3-202ENST00000452448 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
EPHA3-202ENST00000452448 RPL36ALQ969Q0 106 aaKnown RBP3.38□□□□□ -1.87
EPHA3-202ENST00000452448 UNC13CQ8NB66 2214 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 LOC101927531A0A1B0GV80 90 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 IGLV1-44P01699 117 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 Q6YL49 198 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 NDUFA4L2Q9NRX3 87 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 A0A087X002 238 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 DEFB108AA8MXU0 73 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 GAS8-AS1O95177 125 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 HIGD2AQ9BW72 106 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 PRUNE2Q8WUY3 3088 aa3.37□□□□□ -1.87
EPHA3-202ENST00000452448 IGLV4-69A0A075B6H9 119 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 A0A0J9YXY3 114 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 CTSGP08311 255 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 IGHV1-8P0DP01 117 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 RPL39P5Q59GN2 51 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 SUMO4Q6EEV6 95 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 HELZ2Q9BYK8 2649 aaKnown RBP3.36□□□□□ -1.87
EPHA3-202ENST00000452448 ASXL3Q9C0F0 2248 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 DNAJC9-AS1A6NH13 148 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 RPL37AP8A6NKH3 93 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 BPY2O14599 106 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 IGHV3-48P01763 117 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 ERHP84090 104 aaKnown RBP3.36□□□□□ -1.87
EPHA3-202ENST00000452448 MIAQ16674 131 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 ZFAND2AQ8N6M9 145 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 Q8NAQ8 132 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 MYO18BQ8IUG5 2567 aa3.36□□□□□ -1.87
EPHA3-202ENST00000452448 A0A1B0GW54 56 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 NCR3O14931 201 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 SAA2P0DJI9 122 aaPredicted RBP3.35□□□□□ -1.87
EPHA3-202ENST00000452448 CSAG1Q6PB30 78 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 LITAFQ99732 161 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 LAMA3Q16787 3333 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 CNOT1A5YKK6 2376 aaKnown RBP3.35□□□□□ -1.87
EPHA3-202ENST00000452448 IGHV1-18A0A0C4DH31 117 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 IGHV3-64DA0A0J9YX35 117 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 C10orf113Q5VZT2 155 aa3.35□□□□□ -1.87
EPHA3-202ENST00000452448 ZNF625Q96I27 306 aaPredicted RBP3.35□□□□□ -1.87
EPHA3-202ENST00000452448 TRBV6-5A0A0K0K1A5 114 aa3.34□□□□□ -1.87
EPHA3-202ENST00000452448 IGHV3-30-3P0DP02 117 aa3.34□□□□□ -1.87
EPHA3-202ENST00000452448 LINC01547P58512 204 aaPredicted RBP3.34□□□□□ -1.87
EPHA3-202ENST00000452448 KRTAP9-6A0A140TA67 174 aa3.34□□□□□ -1.88
EPHA3-202ENST00000452448 COX7A1P24310 79 aa3.34□□□□□ -1.88
EPHA3-202ENST00000452448 TMEM167AQ8TBQ9 72 aa3.34□□□□□ -1.88
EPHA3-202ENST00000452448 ZFYVE26Q68DK2 2539 aa3.34□□□□□ -1.88
EPHA3-202ENST00000452448 ANKRD17O75179 2603 aaKnown RBP3.34□□□□□ -1.88
EPHA3-202ENST00000452448 KNL1Q8NG31 2342 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 KNTC1P50748 2209 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 IGKV1OR2-108A0A075B7D4 117 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 TRBV6-1A0A0K0K1D8 114 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 PRB2P02812 416 aaPredicted RBP3.33□□□□□ -1.88
EPHA3-202ENST00000452448 HAMPP81172 84 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 C2orf66Q6UXQ4 117 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 MIR7-3HGQ8N6C7 128 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 XAGE1AQ9HD64 81 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 USP9XQ93008 2570 aaPredicted RBP3.33□□□□□ -1.88
EPHA3-202ENST00000452448 IGHV4OR15-8A0A075B7B6 117 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 CLPSL1A2RUU4 121 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 IGHV1-69P01742 117 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 MIR22HGQ0VDD5 57 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 FAM104AQ969W3 186 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 SMIM2Q9BVW6 85 aa3.33□□□□□ -1.88
EPHA3-202ENST00000452448 MRPL36Q9P0J6 103 aaKnown RBP3.33□□□□□ -1.88
EPHA3-202ENST00000452448 ASCC3Q8N3C0 2202 aaKnown RBP3.32□□□□□ -1.88
EPHA3-202ENST00000452448 COL27A1Q8IZC6 1860 aaPredicted RBP3.32□□□□□ -1.88
EPHA3-202ENST00000452448 CACNA1EQ15878 2313 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 IGHV3-35A0A0C4DH35 117 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 TRBV10-1A0A0K0K1A3 114 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 Q6ZR54 194 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 GAFA1Q96PS6 74 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 OCR1Q9BZK8 76 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 C8orf17Q9NRJ1 99 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 IGHV4-4A0A075B6R2 117 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 IGLV5-39A0A0G2JS06 123 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 A0A1W2PNU3 283 aaPredicted RBP3.32□□□□□ -1.88
EPHA3-202ENST00000452448 DSCR9P59020 149 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 Q8NDZ9 215 aa3.32□□□□□ -1.88
EPHA3-202ENST00000452448 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms