RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 CHD6Q8TD26 2715 aa13.49□□□□□ -0.25
SDCBP-204ENST00000447182 TRBV6-4A0A1B0GX49 114 aa13.49□□□□□ -0.25
SDCBP-204ENST00000447182 C16orf74Q96GX8 76 aa13.49□□□□□ -0.25
SDCBP-204ENST00000447182 CMC4P56277 68 aaPredicted RBP13.48□□□□□ -0.25
SDCBP-204ENST00000447182 SDIM1Q6ZPB5 146 aa13.48□□□□□ -0.25
SDCBP-204ENST00000447182 COX7B2Q8TF08 81 aa13.48□□□□□ -0.25
SDCBP-204ENST00000447182 FAM218AQ96MZ4 157 aa13.48□□□□□ -0.25
SDCBP-204ENST00000447182 C22orf24Q9Y442 160 aa13.48□□□□□ -0.25
SDCBP-204ENST00000447182 NAV2Q8IVL1 2488 aa13.47□□□□□ -0.25
SDCBP-204ENST00000447182 CENPEQ02224 2701 aa13.47□□□□□ -0.25
SDCBP-204ENST00000447182 A0A1W2PRX2 142 aa13.46□□□□□ -0.26
SDCBP-204ENST00000447182 CRPP02741 224 aa13.46□□□□□ -0.26
SDCBP-204ENST00000447182 TRGV2A0A075B6R0 118 aa13.45□□□□□ -0.26
SDCBP-204ENST00000447182 LINC00643Q86TS7 51 aa13.45□□□□□ -0.26
SDCBP-204ENST00000447182 MIR7-3HGQ8N6C7 128 aa13.45□□□□□ -0.26
SDCBP-204ENST00000447182 OVOL2Q9BRP0 275 aa13.45□□□□□ -0.26
SDCBP-204ENST00000447182 DNAJC9-AS1A6NH13 148 aa13.45□□□□□ -0.26
SDCBP-204ENST00000447182 FAM110AQ9BQ89 295 aa13.45□□□□□ -0.26
SDCBP-204ENST00000447182 WNK1Q9H4A3 2382 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 LRRK2Q5S007 2527 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 IGKV2-28A0A075B6P5 120 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 LOC100131303A0A0U1RQF7 123 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 IGKV2D-28P01615 120 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 KRTAP1-3Q8IUG1 177 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 LINC00337Q8N6G1 96 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 C11orf44Q8N8P7 122 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 SVIPQ8NHG7 77 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 SMCR5Q8TEV8 140 aa13.44□□□□□ -0.26
SDCBP-204ENST00000447182 INAFM2P0DMQ5 153 aa13.43□□□□□ -0.26
SDCBP-204ENST00000447182 SND1-IT1Q9HBX3 110 aa13.43□□□□□ -0.26
SDCBP-204ENST00000447182 IGHV3OR16-9A0A0B4J2B5 98 aa13.42□□□□□ -0.26
SDCBP-204ENST00000447182 C2CD3Q4AC94 2353 aa13.41□□□□□ -0.26
SDCBP-204ENST00000447182 TRBV6-8A0A0A6YYG3 113 aa13.41□□□□□ -0.26
SDCBP-204ENST00000447182 MALP21145 153 aa13.41□□□□□ -0.26
SDCBP-204ENST00000447182 CSNK1G2-AS1Q8NCQ2 148 aa13.41□□□□□ -0.26
SDCBP-204ENST00000447182 CHCHD5Q9BSY4 110 aa13.41□□□□□ -0.26
SDCBP-204ENST00000447182 ABCA12Q86UK0 2595 aa13.4□□□□□ -0.26
SDCBP-204ENST00000447182 EPG5Q9HCE0 2579 aa13.4□□□□□ -0.26
SDCBP-204ENST00000447182 IGLV4-60A0A075B6I1 120 aa13.4□□□□□ -0.26
SDCBP-204ENST00000447182 TRGV4A0A0C4DH28 118 aa13.4□□□□□ -0.26
SDCBP-204ENST00000447182 IBA57-AS1B1ANH7 110 aa13.4□□□□□ -0.26
SDCBP-204ENST00000447182 PRB1P04280 392 aa13.4□□□□□ -0.26
SDCBP-204ENST00000447182 C19orf73Q9NVV2 129 aa13.4□□□□□ -0.26
SDCBP-204ENST00000447182 TOMM7Q9P0U1 55 aa13.4□□□□□ -0.26
SDCBP-204ENST00000447182 A0A087WZ39 114 aa13.39□□□□□ -0.27
SDCBP-204ENST00000447182 NOTCH3Q9UM47 2321 aa13.39□□□□□ -0.27
SDCBP-204ENST00000447182 ZNF462Q96JM2 2506 aa13.39□□□□□ -0.27
SDCBP-204ENST00000447182 UBR5O95071 2799 aaPredicted RBP13.38□□□□□ -0.27
SDCBP-204ENST00000447182 LINC00158P58513 81 aa13.38□□□□□ -0.27
SDCBP-204ENST00000447182 FHL2Q14192 279 aa13.38□□□□□ -0.27
SDCBP-204ENST00000447182 SMIM11BQ8TCY0 68 aa13.38□□□□□ -0.27
SDCBP-204ENST00000447182 Q9HAA7 133 aa13.38□□□□□ -0.27
SDCBP-204ENST00000447182 ESM1Q9NQ30 184 aa13.38□□□□□ -0.27
SDCBP-204ENST00000447182 FAM236AA0A1B0GUQ0 79 aa13.37□□□□□ -0.27
SDCBP-204ENST00000447182 FAM236BA0A1B0GV22 79 aa13.37□□□□□ -0.27
SDCBP-204ENST00000447182 CCL18P55774 89 aa13.37□□□□□ -0.27
SDCBP-204ENST00000447182 WFDC10AQ9H1F0 79 aa13.37□□□□□ -0.27
SDCBP-204ENST00000447182 ZNF469Q96JG9 3925 aaPredicted RBP13.37□□□□□ -0.27
SDCBP-204ENST00000447182 TLN2Q9Y4G6 2542 aa13.37□□□□□ -0.27
SDCBP-204ENST00000447182 H0YGX0 51 aa13.37□□□□□ -0.27
SDCBP-204ENST00000447182 IGLV1-51P01701 117 aa13.37□□□□□ -0.27
SDCBP-204ENST00000447182 RPL35AP18077 110 aaKnown RBP13.36□□□□□ -0.27
SDCBP-204ENST00000447182 IGKV3OR2-268A0A0C4DH90 116 aa13.36□□□□□ -0.27
SDCBP-204ENST00000447182 CXCL5P42830 114 aa13.36□□□□□ -0.27
SDCBP-204ENST00000447182 DNAL4O96015 105 aa13.34□□□□□ -0.27
SDCBP-204ENST00000447182 A0A087WYN8 130 aa13.34□□□□□ -0.27
SDCBP-204ENST00000447182 C5orf38Q86SI9 138 aa13.34□□□□□ -0.27
SDCBP-204ENST00000447182 SETXQ7Z333 2677 aaKnown RBP13.34□□□□□ -0.27
SDCBP-204ENST00000447182 ATP5G1P05496 136 aa13.33□□□□□ -0.28
SDCBP-204ENST00000447182 GAGE2AQ6NT46 116 aa13.33□□□□□ -0.28
SDCBP-204ENST00000447182 PLA2G2AP14555 144 aa13.32□□□□□ -0.28
SDCBP-204ENST00000447182 OBSCN-AS1Q96MR7 158 aa13.32□□□□□ -0.28
SDCBP-204ENST00000447182 BBC3Q96PG8 261 aaPredicted RBP13.32□□□□□ -0.28
SDCBP-204ENST00000447182 C16orf95Q9H693 158 aa13.32□□□□□ -0.28
SDCBP-204ENST00000447182 SONP18583 2426 aaKnown RBP13.32□□□□□ -0.28
SDCBP-204ENST00000447182 JMJD1CQ15652 2540 aa13.32□□□□□ -0.28
SDCBP-204ENST00000447182 LINC00959A0A1B0GUT2 108 aa13.31□□□□□ -0.28
SDCBP-204ENST00000447182 LINC01006Q8NI28 216 aa13.31□□□□□ -0.28
SDCBP-204ENST00000447182 NF1P21359 2839 aa13.3□□□□□ -0.28
SDCBP-204ENST00000447182 ZFYVE26Q68DK2 2539 aa13.3□□□□□ -0.28
SDCBP-204ENST00000447182 ITPR3Q14573 2671 aa13.3□□□□□ -0.28
SDCBP-204ENST00000447182 NBPF19A0A087WUL8 3843 aa13.29□□□□□ -0.28
SDCBP-204ENST00000447182 LY6G6DO95868 133 aa13.29□□□□□ -0.28
SDCBP-204ENST00000447182 PFN2P35080 140 aa13.29□□□□□ -0.28
SDCBP-204ENST00000447182 ZNF843Q8N446 348 aa13.29□□□□□ -0.28
SDCBP-204ENST00000447182 TMEM126AQ9H061 195 aa13.28□□□□□ -0.28
SDCBP-204ENST00000447182 WFDC11Q8NEX6 87 aa13.28□□□□□ -0.28
SDCBP-204ENST00000447182 KIR2DL5BQ8NHK3 375 aa13.28□□□□□ -0.28
SDCBP-204ENST00000447182 PAX4O43316 350 aa13.27□□□□□ -0.28
SDCBP-204ENST00000447182 APCP25054 2843 aa13.27□□□□□ -0.28
SDCBP-204ENST00000447182 A0A1B0GUV1 79 aa13.27□□□□□ -0.29
SDCBP-204ENST00000447182 RNASE1P07998 156 aaKnown RBP13.27□□□□□ -0.29
SDCBP-204ENST00000447182 C6orf226Q5I0X4 101 aa13.27□□□□□ -0.29
SDCBP-204ENST00000447182 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.29
SDCBP-204ENST00000447182 USP24Q9UPU5 2620 aa13.26□□□□□ -0.29
SDCBP-204ENST00000447182 C9orf129Q5T035 196 aaKnown RBP13.26□□□□□ -0.29
SDCBP-204ENST00000447182 LECT2O14960 151 aa13.25□□□□□ -0.29
SDCBP-204ENST00000447182 Q8IZM0 81 aa13.25□□□□□ -0.29
SDCBP-204ENST00000447182 KLK5Q9Y337 293 aaPredicted RBP13.25□□□□□ -0.29
SDCBP-204ENST00000447182 LINC01561Q8N1V8 128 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms