RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 GAGE12HA6NDE8 117 aa11.46□□□□□ -0.57
LIME1-202ENST00000444951 H0Y8G0 127 aa11.46□□□□□ -0.57
LIME1-202ENST00000444951 PRSS1P07477 247 aa11.46□□□□□ -0.57
LIME1-202ENST00000444951 AMELXQ99217 191 aa11.46□□□□□ -0.57
LIME1-202ENST00000444951 CST9LQ9H4G1 147 aa11.45□□□□□ -0.58
LIME1-202ENST00000444951 HSPB8Q9UJY1 196 aa11.45□□□□□ -0.58
LIME1-202ENST00000444951 SNRPEP62304 92 aaKnown RBP11.44□□□□□ -0.58
LIME1-202ENST00000444951 PMVKQ15126 192 aa11.44□□□□□ -0.58
LIME1-202ENST00000444951 Q6ZRN7 208 aaPredicted RBP11.44□□□□□ -0.58
LIME1-202ENST00000444951 UBE2D1P51668 147 aa11.43□□□□□ -0.58
LIME1-202ENST00000444951 COX11Q9Y6N1 276 aa11.43□□□□□ -0.58
LIME1-202ENST00000444951 A0A0J9YXV3 536 aa11.42□□□□□ -0.58
LIME1-202ENST00000444951 LECT2O14960 151 aa11.42□□□□□ -0.58
LIME1-202ENST00000444951 S100A2P29034 98 aa11.42□□□□□ -0.58
LIME1-202ENST00000444951 MAPKAPK5-AS1Q8N8E1 139 aa11.42□□□□□ -0.58
LIME1-202ENST00000444951 C16orf90A8MZG2 172 aa11.41□□□□□ -0.58
LIME1-202ENST00000444951 KRTAP26-1Q6PEX3 210 aa11.41□□□□□ -0.58
LIME1-202ENST00000444951 HIST3H2BBQ8N257 126 aa11.41□□□□□ -0.58
LIME1-202ENST00000444951 COX6A2Q02221 97 aa11.4□□□□□ -0.58
LIME1-202ENST00000444951 FOXI1Q12951 378 aa11.4□□□□□ -0.58
LIME1-202ENST00000444951 LINC00242Q5T6M2 205 aa11.4□□□□□ -0.58
LIME1-202ENST00000444951 CD164L2Q6UWJ8 174 aa11.4□□□□□ -0.58
LIME1-202ENST00000444951 C5orf38Q86SI9 138 aa11.4□□□□□ -0.58
LIME1-202ENST00000444951 MAP1LC3CQ9BXW4 147 aa11.39□□□□□ -0.59
LIME1-202ENST00000444951 GEMIN7Q9H840 131 aaKnown RBP11.39□□□□□ -0.59
LIME1-202ENST00000444951 CHTOPQ9Y3Y2 248 aaKnown RBP11.39□□□□□ -0.59
LIME1-202ENST00000444951 C5orf52A6NGY3 159 aa11.37□□□□□ -0.59
LIME1-202ENST00000444951 COX7A2LO14548 114 aa11.37□□□□□ -0.59
LIME1-202ENST00000444951 KRTDAPP60985 99 aa11.37□□□□□ -0.59
LIME1-202ENST00000444951 WFDC2Q14508 124 aa11.37□□□□□ -0.59
LIME1-202ENST00000444951 TRAV12-1A0A0B4J245 112 aa11.36□□□□□ -0.59
LIME1-202ENST00000444951 MALP21145 153 aa11.36□□□□□ -0.59
LIME1-202ENST00000444951 SEC11AP67812 179 aa11.36□□□□□ -0.59
LIME1-202ENST00000444951 PACRGQ96M98 296 aaPredicted RBP11.36□□□□□ -0.59
LIME1-202ENST00000444951 HIST1H2BLQ99880 126 aa11.36□□□□□ -0.59
LIME1-202ENST00000444951 PMCHL2Q9BQD1 86 aa11.36□□□□□ -0.59
LIME1-202ENST00000444951 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
LIME1-202ENST00000444951 TINCRA0A1B0GVN0 87 aa11.35□□□□□ -0.59
LIME1-202ENST00000444951 USP17L23D6RBM5 183 aa11.35□□□□□ -0.59
LIME1-202ENST00000444951 CDK2AP2O75956 126 aa11.35□□□□□ -0.59
LIME1-202ENST00000444951 HERVK_113P63121 156 aa11.35□□□□□ -0.59
LIME1-202ENST00000444951 SPATA12Q7Z6I5 190 aa11.35□□□□□ -0.59
LIME1-202ENST00000444951 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
LIME1-202ENST00000444951 MRPL35Q9NZE8 188 aaKnown RBP11.35□□□□□ -0.59
LIME1-202ENST00000444951 IGLV4-69A0A075B6H9 119 aa11.34□□□□□ -0.59
LIME1-202ENST00000444951 A0A087WTM6 91 aa11.34□□□□□ -0.59
LIME1-202ENST00000444951 IGHV3OR16-9A0A0B4J2B5 98 aa11.34□□□□□ -0.59
LIME1-202ENST00000444951 SYS1-DBNDD2H3BUS1 97 aa11.34□□□□□ -0.59
LIME1-202ENST00000444951 C3orf79P0CE67 100 aa11.34□□□□□ -0.59
LIME1-202ENST00000444951 ODF1Q14990 250 aa11.34□□□□□ -0.59
LIME1-202ENST00000444951 FAM19A3Q7Z5A8 133 aa11.34□□□□□ -0.59
LIME1-202ENST00000444951 CDKN2A-AS1Q9UH64 79 aa11.34□□□□□ -0.59
LIME1-202ENST00000444951 LRCOL1A6NCL2 159 aa11.33□□□□□ -0.6
LIME1-202ENST00000444951 IGLC3P0DOY3 106 aa11.33□□□□□ -0.6
LIME1-202ENST00000444951 KRTAP10-2P60368 255 aa11.33□□□□□ -0.6
LIME1-202ENST00000444951 HIGD2BQ4VC39 106 aa11.33□□□□□ -0.6
LIME1-202ENST00000444951 C11orf86A6NJI1 115 aa11.32□□□□□ -0.6
LIME1-202ENST00000444951 F8VRH5 84 aa11.32□□□□□ -0.6
LIME1-202ENST00000444951 EREGO14944 169 aa11.32□□□□□ -0.6
LIME1-202ENST00000444951 TMEM170BQ5T4T1 132 aa11.31□□□□□ -0.6
LIME1-202ENST00000444951 CFAP161Q6P656 301 aa11.31□□□□□ -0.6
LIME1-202ENST00000444951 C15orf56Q8N910 161 aa11.31□□□□□ -0.6
LIME1-202ENST00000444951 FAT1Q14517 4588 aa11.31□□□□□ -0.6
LIME1-202ENST00000444951 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.3□□□□□ -0.6
LIME1-202ENST00000444951 A0A087WZ39 114 aa11.3□□□□□ -0.6
LIME1-202ENST00000444951 IGHV1-58A0A0C4DH39 117 aa11.3□□□□□ -0.6
LIME1-202ENST00000444951 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
LIME1-202ENST00000444951 SPINK8P0C7L1 97 aa11.3□□□□□ -0.6
LIME1-202ENST00000444951 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
LIME1-202ENST00000444951 LINC00526Q96FQ7 95 aa11.3□□□□□ -0.6
LIME1-202ENST00000444951 APOMO95445 188 aa11.29□□□□□ -0.6
LIME1-202ENST00000444951 ZNF22P17026 224 aaPredicted RBP11.29□□□□□ -0.6
LIME1-202ENST00000444951 FUSP35637 526 aaKnown RBP eCLIP11.29□□□□□ -0.6
LIME1-202ENST00000444951 ORAOV1Q8WV07 137 aa11.29□□□□□ -0.6
LIME1-202ENST00000444951 VPS13BQ7Z7G8 4022 aa11.28□□□□□ -0.6
LIME1-202ENST00000444951 HERC1Q15751 4861 aa11.28□□□□□ -0.6
LIME1-202ENST00000444951 IGHV3-64A0A075B6Q5 118 aa11.28□□□□□ -0.6
LIME1-202ENST00000444951 H3BRM9 83 aa11.28□□□□□ -0.6
LIME1-202ENST00000444951 DPM2O94777 84 aa11.28□□□□□ -0.6
LIME1-202ENST00000444951 C14orf177Q52M58 125 aa11.28□□□□□ -0.6
LIME1-202ENST00000444951 Q8N814 137 aa11.28□□□□□ -0.6
LIME1-202ENST00000444951 IGLV5-45A0A087WSX0 123 aa11.27□□□□□ -0.61
LIME1-202ENST00000444951 PLNP26678 52 aa11.27□□□□□ -0.61
LIME1-202ENST00000444951 OR10D4PQ8NGN7 298 aa11.27□□□□□ -0.61
LIME1-202ENST00000444951 TOMM7Q9P0U1 55 aa11.27□□□□□ -0.61
LIME1-202ENST00000444951 C20orf202A1L168 122 aa11.26□□□□□ -0.61
LIME1-202ENST00000444951 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
LIME1-202ENST00000444951 IGKCP01834 107 aa11.26□□□□□ -0.61
LIME1-202ENST00000444951 SPAG11BQ08648 103 aa11.26□□□□□ -0.61
LIME1-202ENST00000444951 LINC01545Q5VT33 79 aa11.26□□□□□ -0.61
LIME1-202ENST00000444951 Q8N1X5 172 aa11.26□□□□□ -0.61
LIME1-202ENST00000444951 SMIM1B2RUZ4 78 aa11.25□□□□□ -0.61
LIME1-202ENST00000444951 GVQW2A0A096LPI5 108 aaPredicted RBP11.24□□□□□ -0.61
LIME1-202ENST00000444951 LINC01561Q8N1V8 128 aa11.24□□□□□ -0.61
LIME1-202ENST00000444951 PRSS2P07478 247 aa11.23□□□□□ -0.61
LIME1-202ENST00000444951 ATOH7Q8N100 152 aa11.23□□□□□ -0.61
LIME1-202ENST00000444951 TMEM223A0PJW6 202 aa11.21□□□□□ -0.61
LIME1-202ENST00000444951 SCGB1D1O95968 90 aa11.21□□□□□ -0.61
LIME1-202ENST00000444951 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.61
LIME1-202ENST00000444951 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms