RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 ANAPC13Q9BS18 74 aa3.22□□□□□ -1.89
PRKD3-204ENST00000443977 TMEM243Q9BU79 118 aa3.22□□□□□ -1.89
PRKD3-204ENST00000443977 XCL2Q9UBD3 114 aa3.22□□□□□ -1.89
PRKD3-204ENST00000443977 CDKN2A-AS1Q9UH64 79 aa3.22□□□□□ -1.89
PRKD3-204ENST00000443977 SMG1Q96Q15 3661 aaKnown RBP3.22□□□□□ -1.89
PRKD3-204ENST00000443977 SPG11Q96JI7 2443 aa3.22□□□□□ -1.89
PRKD3-204ENST00000443977 UBR5O95071 2799 aaPredicted RBP3.22□□□□□ -1.89
PRKD3-204ENST00000443977 TEX15Q9BXT5 2789 aa3.22□□□□□ -1.89
PRKD3-204ENST00000443977 ZZEF1O43149 2961 aa3.21□□□□□ -1.89
PRKD3-204ENST00000443977 FBN2P35556 2912 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 CREBBPQ92793 2442 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 IGHV3OR16-12A0A075B7B8 117 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 TRAV26-1A0A087WT03 109 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 IGLV5-39A0A0G2JS06 123 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 TRBV6-4A0A1B0GX49 114 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 RBMY1BA6NDE4 496 aaKnown RBP3.21□□□□□ -1.9
PRKD3-204ENST00000443977 RBMY1EA6NEQ0 496 aaKnown RBP3.21□□□□□ -1.9
PRKD3-204ENST00000443977 LST1O00453 97 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 COX7A2LO14548 114 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 MT-ATP8P03928 68 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 RBMY1DP0C7P1 496 aaKnown RBP3.21□□□□□ -1.9
PRKD3-204ENST00000443977 XGP55808 180 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 DEFB136Q30KP8 78 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 DEFB121Q5J5C9 76 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 CEMP1Q6PRD7 247 aaPredicted RBP3.21□□□□□ -1.9
PRKD3-204ENST00000443977 LINC00308Q8TCZ7 52 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 Q9H8V8 135 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 CDC42SE2Q9NRR3 84 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 BOD1L1Q8NFC6 3051 aa3.21□□□□□ -1.9
PRKD3-204ENST00000443977 CR1P17927 2039 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 UBR4Q5T4S7 5183 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 TRGV2A0A075B6R0 118 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 TRAV13-1A0A0B4J241 112 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 TRGV4A0A0C4DH28 118 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 IGHV3-38A0A0C4DH36 116 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 H0YGX0 51 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 TRACP01848 142 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 INAFM2P0DMQ5 153 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 GAGE5Q13069 117 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 GAGE6Q13070 117 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 FHL3Q13643 280 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 RNASE13Q5GAN3 156 aaKnown RBP3.2□□□□□ -1.9
PRKD3-204ENST00000443977 ADAMTSL4-AS1Q5T5F5 129 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 LINC00242Q5T6M2 205 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 FAM222AQ5U5X8 452 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 C1orf158Q8N1D5 194 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 NRGNQ92686 78 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 IMUPQ9GZP8 106 aa3.2□□□□□ -1.9
PRKD3-204ENST00000443977 ADGRG4Q8IZF6 3080 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 DMXL1Q9Y485 3027 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 TEX49A0A1B0GTD5 131 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 GAGE12JA6NER3 117 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 SMIM1B2RUZ4 78 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 DNAL4O96015 105 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 CRPP02741 224 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 NPC2P61916 151 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 GAGE4Q13068 117 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 ODF3L2Q3SX64 289 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 HIST2H2BCQ6DN03 193 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 HIST2H2BDQ6DRA6 164 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 Q6ZSV7 163 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 C15orf53Q8NAA6 179 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 MAPK1IP1LQ8NDC0 245 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 COX7B2Q8TF08 81 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 FAM104AQ969W3 186 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 CITED1Q99966 193 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 C16orf95Q9H693 158 aa3.19□□□□□ -1.9
PRKD3-204ENST00000443977 NOP10Q9NPE3 64 aaKnown RBP3.19□□□□□ -1.9
PRKD3-204ENST00000443977 HRNRQ86YZ3 2850 aaPredicted RBP3.18□□□□□ -1.9
PRKD3-204ENST00000443977 SMIM9A6NGZ8 99 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 IBA57-AS1B1ANH7 110 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 GAGE7O76087 117 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 ATP5G1P05496 136 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 BAALC-AS2P0C853 105 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 GAGE12FP0CL80 117 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 GAGE12GP0CL81 117 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 GAGE12IP0CL82 117 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 RPL28P46779 137 aaKnown RBP3.18□□□□□ -1.9
PRKD3-204ENST00000443977 NDUFV3P56181 108 aaKnown RBP3.18□□□□□ -1.9
PRKD3-204ENST00000443977 LINC00158P58513 81 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 COX6A2Q02221 97 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 SS18Q15532 418 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 Q6ZTI0 123 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 C18orf65Q6ZTR6 163 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 LINC00643Q86TS7 51 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 LINC01561Q8N1V8 128 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 CLEC2BQ92478 149 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 ZNF625Q96I27 306 aaPredicted RBP3.18□□□□□ -1.9
PRKD3-204ENST00000443977 CITED2Q99967 270 aaPredicted RBP3.18□□□□□ -1.9
PRKD3-204ENST00000443977 LRBAP50851 2863 aa3.18□□□□□ -1.9
PRKD3-204ENST00000443977 ATMQ13315 3056 aa3.17□□□□□ -1.9
PRKD3-204ENST00000443977 TRBV6-8A0A0A6YYG3 113 aa3.17□□□□□ -1.9
PRKD3-204ENST00000443977 A8MZ25 164 aa3.17□□□□□ -1.9
PRKD3-204ENST00000443977 C6orf226Q5I0X4 101 aa3.17□□□□□ -1.9
PRKD3-204ENST00000443977 DAND5Q8N907 189 aa3.17□□□□□ -1.9
PRKD3-204ENST00000443977 CHCHD5Q9BSY4 110 aa3.17□□□□□ -1.9
PRKD3-204ENST00000443977 SND1-IT1Q9HBX3 110 aa3.17□□□□□ -1.9
PRKD3-204ENST00000443977 BSNQ9UPA5 3926 aa3.16□□□□□ -1.9
PRKD3-204ENST00000443977 WNK1Q9H4A3 2382 aa3.16□□□□□ -1.9
PRKD3-204ENST00000443977 DMXL2Q8TDJ6 3036 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms