RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ARFGEF2Q9Y6D5 1785 aa2.2□□□□□ -2.06
TM9SF3-202ENST00000443638 IGLV3-32A0A0A0MS00 114 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 CRYM-AS1A6NIL9 109 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 NMBP08949 121 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 ZNF818PQ6ZRF7 136 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 SNURFQ9Y675 71 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 MYOFQ9NZM1 2061 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 PARP14Q460N5 1801 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 NCOR2Q9Y618 2525 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 SSC5DA1L4H1 1573 aa2.19□□□□□ -2.06
TM9SF3-202ENST00000443638 MAP1BP46821 2468 aaKnown RBP2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 SNRNP200O75643 2136 aaKnown RBP2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 TRAV23DV6A0A075B6W5 121 aa2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 NDUFC1O43677 76 aa2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 DNAL4O96015 105 aa2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 FAM213BQ8TBF2 198 aa2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 S100A16Q96FQ6 103 aaKnown RBP2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 C20orf78Q9BR46 151 aa2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 PATJQ8NI35 1801 aa2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 CHD3Q12873 2000 aaKnown RBP2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 ZNF831Q5JPB2 1677 aa2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 FLNBO75369 2602 aaKnown RBP2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 PCDH15Q96QU1 1955 aa2.18□□□□□ -2.06
TM9SF3-202ENST00000443638 COL5A1P20908 1838 aaPredicted RBP2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 SERP2Q8N6R1 65 aa2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 TRGV9Q99603 122 aa2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 WFDC10AQ9H1F0 79 aa2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 CACFD1Q9UGQ2 172 aa2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 RABAC1Q9UI14 185 aa2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 ACACBO00763 2458 aa2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 ZNF292O60281 2723 aa2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 LRRC37A2A6NM11 1700 aa2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 DDX60LQ5H9U9 1706 aaKnown RBP2.17□□□□□ -2.06
TM9SF3-202ENST00000443638 ANKRD11Q6UB99 2663 aaPredicted RBP2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 PLXNA1Q9UIW2 1896 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 XIRP2A4UGR9 3374 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 PLIN4Q96Q06 1357 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 TRAPPC2P0DI81 140 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 TRAPPC2BP0DI82 140 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 UBE2D1P51668 147 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 TDRG1Q3Y452 100 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 GDF5OSQ5U4N7 250 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 CYP2G1PQ6ZSU1 146 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 ZNF720Q7Z2F6 126 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 UQCR10Q9UDW1 63 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 RIF1Q5UIP0 2472 aaKnown RBP2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 INTS1Q8N201 2190 aaKnown RBP2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 MAST4O15021 2626 aa2.16□□□□□ -2.06
TM9SF3-202ENST00000443638 NAV2Q8IVL1 2488 aa2.15□□□□□ -2.06
TM9SF3-202ENST00000443638 SPTBN2O15020 2390 aa2.15□□□□□ -2.06
TM9SF3-202ENST00000443638 USP24Q9UPU5 2620 aa2.15□□□□□ -2.06
TM9SF3-202ENST00000443638 IL9P15248 144 aa2.15□□□□□ -2.07
TM9SF3-202ENST00000443638 C10orf128Q5T292 105 aa2.15□□□□□ -2.07
TM9SF3-202ENST00000443638 KRTAP5-5Q701N2 237 aaPredicted RBP2.15□□□□□ -2.07
TM9SF3-202ENST00000443638 MANBALQ9NQG1 85 aa2.15□□□□□ -2.07
TM9SF3-202ENST00000443638 PRRC2BQ5JSZ5 2229 aaKnown RBP2.15□□□□□ -2.07
TM9SF3-202ENST00000443638 FAM186AA6NE01 2351 aa2.15□□□□□ -2.07
TM9SF3-202ENST00000443638 SIP14410 1827 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 DNAH12Q6ZR08 3092 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 CHD9Q3L8U1 2897 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 TANC1Q9C0D5 1861 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 DMXL1Q9Y485 3027 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 TRBV7-3A0A075B6L6 115 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 IGKV3OR2-268A0A0C4DH90 116 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 IGLC7A0M8Q6 106 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 HIGD1CA8MV81 97 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 SYS1-DBNDD2H3BUS1 97 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 APOC3P02656 99 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 ALKAL2Q6UX46 152 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 PP632Q6XCG6 107 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 FAM167A-AS1Q96KT0 104 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 OBSCN-AS1Q96MR7 158 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 TECTAO75443 2155 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 DUOX1Q9NRD9 1551 aa2.14□□□□□ -2.07
TM9SF3-202ENST00000443638 ASH1LQ9NR48 2969 aaKnown RBP2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 CHD7Q9P2D1 2997 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 PTPRDP23468 1912 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 TCHHQ07283 1943 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 COL4A1P02462 1669 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 SCN7AQ01118 1682 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 TEX49A0A1B0GTD5 131 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 SPATA45Q537H7 98 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 AMELYQ99218 206 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 PRO1854Q9UHT4 67 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 EDC4Q6P2E9 1401 aaKnown RBP2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 FAM208BQ5VWN6 2430 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 ZFYVE26Q68DK2 2539 aa2.13□□□□□ -2.07
TM9SF3-202ENST00000443638 USP9XQ93008 2570 aaPredicted RBP2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 TRIOO75962 3097 aa2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 A0A0G2JMZ2 1700 aa2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 GCN1Q92616 2671 aaKnown RBP2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 TRBV6-7A0A0A0MS04 114 aa2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 SMIM31A0A1B0GVY4 71 aa2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 UBE2D3P61077 147 aa2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 UBE2D2P62837 147 aa2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 KRTAP13-1Q8IUC0 172 aa2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 NXT2Q9NPJ8 142 aaKnown RBP2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 MYO18AQ92614 2054 aaKnown RBP2.12□□□□□ -2.07
TM9SF3-202ENST00000443638 ZGRF1Q86YA3 2104 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms