RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PCDH15Q96QU1 1955 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 FREM2Q5SZK8 3169 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 DNHD1Q96M86 4753 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 IGKV1D-37A0A075B6S9 117 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 IGHV3-15A0A0B4J1V0 119 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 IGHV3-73A0A0B4J1V6 119 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 MYMXA0A1B0GTQ4 84 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 TMEM30CPA0ZSE6 113 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 C17orf98A8MV24 154 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 F8WEM9 126 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 DNAH10OSP0CZ25 163 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 SMIM11AP58511 58 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 MOBPQ13875 183 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 Q5VV11 94 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 Q6ZQT0 140 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 GNG13Q9P2W3 67 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 PRRC2AP48634 2157 aaKnown RBP2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 NOTCH3Q9UM47 2321 aa2.47□□□□□ -2.01
CDC42BPA-207ENST00000441725 DUOX1Q9NRD9 1551 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 COL12A1Q99715 3063 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 PIGBOS1A0A0B4J2F0 54 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 TEX49A0A1B0GTD5 131 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 A0A1B0GWA3 101 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 MIFP14174 115 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 SPINT3P49223 89 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 CYP4F30PQ9H0H9 118 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 DYNLRB1Q9NP97 96 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 PSENENQ9NZ42 101 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 POLQO75417 2590 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 SDHAF1A6NFY7 115 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 HMGN2P05204 90 aaKnown RBP2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 MSMBP08118 114 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 P0C880 135 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 PSMG4Q5JS54 123 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 FAM27BQ5VT28 67 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 SMIM4Q8WVI0 70 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 PRO1854Q9UHT4 67 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 KLK12Q9UKR0 248 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 AKAP13Q12802 2813 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 SPTBP11277 2137 aa2.46□□□□□ -2.02
CDC42BPA-207ENST00000441725 WDFY3Q8IZQ1 3526 aa2.45□□□□□ -2.02
CDC42BPA-207ENST00000441725 ESPL1Q14674 2120 aa2.45□□□□□ -2.02
CDC42BPA-207ENST00000441725 A6NIN4 97 aa2.45□□□□□ -2.02
CDC42BPA-207ENST00000441725 GDF5OSQ5U4N7 250 aa2.45□□□□□ -2.02
CDC42BPA-207ENST00000441725 DYNAPQ8N1N2 210 aa2.45□□□□□ -2.02
CDC42BPA-207ENST00000441725 COL11A1P12107 1806 aaPredicted RBP2.45□□□□□ -2.02
CDC42BPA-207ENST00000441725 SIP14410 1827 aa2.45□□□□□ -2.02
CDC42BPA-207ENST00000441725 IGKV1D-42A0A075B6H8 117 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 TRBV25-1A0A075B6N4 114 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 TRBV10-3A0A0K0K1G6 114 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 S100A3P33764 101 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 NNATQ16517 81 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 ST20-AS1Q8NBB2 130 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 MUC7Q8TAX7 377 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 KLF14Q8TD94 323 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 FAM167A-AS1Q96KT0 104 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 LINC00467Q9BRT7 94 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 S4R3C0 116 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 SETD2Q9BYW2 2564 aaPredicted RBP2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 NAV3Q8IVL0 2385 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 TRBV7-3A0A075B6L6 115 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 TRAV7A0A075B6U4 112 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 IGLV3-32A0A0A0MS00 114 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 IGKV3-11P04433 115 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 MGST1P10620 155 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 NOTCH2Q04721 2471 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 NF1P21359 2839 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 LRRC37AA6NMS7 1700 aa2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 DDX60Q8IY21 1712 aaKnown RBP2.44□□□□□ -2.02
CDC42BPA-207ENST00000441725 NCOA6Q14686 2063 aaPredicted RBP2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 SHROOM3Q8TF72 1996 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 TRBV10-2A0A0K0K1G8 114 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 CEBPZOSA8MTT3 80 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 CHKB-CPT1BH3BT56 60 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 PRH1P02810 166 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 EDDM3BP56851 147 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 SSBP1Q04837 148 aaKnown RBP2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 ZNF826PQ6ZT77 177 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 NDUFA11Q86Y39 141 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 IFI27L1Q96BM0 104 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 NMES1Q9C002 83 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 PRB1P04280 392 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 EIF4EBP1Q13541 118 aaPredicted RBP2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 Q6JHZ5 121 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 CASC2Q6XLA1 102 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 CMC2Q9NRP2 79 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 CREBBPQ92793 2442 aa2.43□□□□□ -2.02
CDC42BPA-207ENST00000441725 COL4A1P02462 1669 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 CAV3P56539 151 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 MIR22HGQ0VDD5 57 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 PLGLAQ15195 96 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 UBE2D4Q9Y2X8 147 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 PLXNB2O15031 1838 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 LAMA5O15230 3695 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 ZGRF1Q86YA3 2104 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 CD24P25063 80 aa2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 IFI27P40305 119 aaPredicted RBP2.42□□□□□ -2.02
CDC42BPA-207ENST00000441725 C10orf128Q5T292 105 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms