RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 LINC00959A0A1B0GUT2 108 aa4.19□□□□□ -1.74
VPS50-205ENST00000441602 TSPEAR-AS2P59090 65 aa4.19□□□□□ -1.74
VPS50-205ENST00000441602 MEIG1Q5JSS6 88 aa4.19□□□□□ -1.74
VPS50-205ENST00000441602 GTF2H5Q6ZYL4 71 aa4.19□□□□□ -1.74
VPS50-205ENST00000441602 CELSR1Q9NYQ6 3014 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 IGLV4-60A0A075B6I1 120 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 C9orf118A6NHY6 69 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 K7EIL1 84 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 TAX1BP3O14907 124 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 APOMO95445 188 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 COX7B2Q8TF08 81 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 TM2D3Q9BRN9 247 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 SMIM1B2RUZ4 78 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 FABP2P12104 132 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 FXYD2P54710 66 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 Q6ZTC4 211 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 CFAP161Q6P656 301 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 MRAPQ8TCY5 172 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 RAB37Q96AX2 223 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 TOMM7Q9P0U1 55 aa4.18□□□□□ -1.74
VPS50-205ENST00000441602 MALP21145 153 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 COX6A2Q02221 97 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 SPANXDQ9BXN6 97 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 Q9H8V8 135 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 SPANXCQ9NY87 97 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 CSMD2Q7Z408 3487 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 A0A087WZ39 114 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 COX7A2LO14548 114 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 CXCL5P42830 114 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 NANOS2P60321 138 aaKnown RBP4.17□□□□□ -1.74
VPS50-205ENST00000441602 REG3AQ06141 175 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 CD164L2Q6UWJ8 174 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 AKAP9Q99996 3911 aa4.17□□□□□ -1.74
VPS50-205ENST00000441602 MIAQ16674 131 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 LYPD5Q6UWN5 251 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 TRAV8-4A0A0B4J246 113 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 H3BUT2 72 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 XCL1P47992 114 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 C6orf226Q5I0X4 101 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 C5orf38Q86SI9 138 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 C10orf126Q8N4M7 172 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 NBPF19A0A087WUL8 3843 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 A0A1B0GWB2 263 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 GAGE10A6NGK3 116 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 PRB2P02812 416 aaPredicted RBP4.16□□□□□ -1.74
VPS50-205ENST00000441602 LINC00269Q8N2A0 174 aa4.16□□□□□ -1.74
VPS50-205ENST00000441602 CHCHD10Q8WYQ3 142 aaPredicted RBP4.16□□□□□ -1.74
VPS50-205ENST00000441602 IGHV3OR16-9A0A0B4J2B5 98 aa4.15□□□□□ -1.74
VPS50-205ENST00000441602 IGHV3-30P01768 117 aa4.15□□□□□ -1.74
VPS50-205ENST00000441602 IGHV3-30-5P0DP03 117 aa4.15□□□□□ -1.74
VPS50-205ENST00000441602 MDFIQ99750 246 aa4.15□□□□□ -1.74
VPS50-205ENST00000441602 NF1P21359 2839 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 CKS1BP61024 79 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 UBE2V1Q13404 147 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 CLPSL2Q6UWE3 100 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 A0A0B4J2C4 111 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 NHLRC4P0CG21 123 aaPredicted RBP4.15□□□□□ -1.75
VPS50-205ENST00000441602 CCL18P55774 89 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 Q1RN00 199 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 MUSTN1Q8IVN3 82 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 Q8IZM0 81 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 KLK12Q9UKR0 248 aa4.15□□□□□ -1.75
VPS50-205ENST00000441602 A0A1W2PPM0 123 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 IGLL5B9A064 214 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 IGHV3-33P01772 117 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 RMI2Q96E14 147 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 B9D2Q9BPU9 175 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 PRO1854Q9UHT4 67 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 ERG28Q9UKR5 140 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 SPCS1Q9Y6A9 102 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 A4D1N5 150 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 IBA57-AS1B1ANH7 110 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 LINC00158P58513 81 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 UBE2WQ96B02 151 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 PPDPFQ9H3Y8 114 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 GAGE12HA6NDE8 117 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 K7ERJ3 54 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 ZNF625Q96I27 306 aaPredicted RBP4.14□□□□□ -1.75
VPS50-205ENST00000441602 KRTAP3-3Q9BYR6 98 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 PGPEP1Q9NXJ5 209 aa4.14□□□□□ -1.75
VPS50-205ENST00000441602 K7EP34 96 aa4.13□□□□□ -1.75
VPS50-205ENST00000441602 PSMB2P49721 201 aa4.13□□□□□ -1.75
VPS50-205ENST00000441602 K7EP13 123 aa4.13□□□□□ -1.75
VPS50-205ENST00000441602 COX6CP09669 75 aa4.13□□□□□ -1.75
VPS50-205ENST00000441602 SCGB1C2P0DMR2 95 aa4.13□□□□□ -1.75
VPS50-205ENST00000441602 MUC7Q8TAX7 377 aa4.13□□□□□ -1.75
VPS50-205ENST00000441602 VPS13CQ709C8 3753 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 LINC01556Q5JQF7 62 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 C1orf43Q9BWL3 253 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 PRR34Q9NV39 138 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 CSMD1Q96PZ7 3565 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 IGLV10-54A0A075B6I4 117 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 SPAG11BQ08648 103 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 KLK5Q9Y337 293 aaPredicted RBP4.12□□□□□ -1.75
VPS50-205ENST00000441602 ZNF469Q96JG9 3925 aaPredicted RBP4.12□□□□□ -1.75
VPS50-205ENST00000441602 LOC107984156A0A0G2JMH3 177 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 CFC1BP0CG36 223 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 CFC1P0CG37 223 aa4.12□□□□□ -1.75
VPS50-205ENST00000441602 ESRGQ1W209 222 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms