RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 CATR1Q13166 79 aa-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 MRPL54Q6P161 138 aaKnown RBP-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 DEFB105AQ8NG35 78 aa-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 SNRNP25Q9BV90 132 aaKnown RBP-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 UQCR10Q9UDW1 63 aa-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 CPSF1Q10570 1443 aaKnown RBP-0.65□□□□□ -2.51
LINC00354-202ENST00000440860 TRBV7-4A0A0J9YYF1 115 aa-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 GNG7O60262 68 aa-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 APOC2P02655 101 aa-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 Q56UQ5 140 aa-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 C8orf59Q8N0T1 100 aaPredicted RBP-0.66□□□□□ -2.52
LINC00354-202ENST00000440860 PHLPP1O60346 1717 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 USH2AO75445 5202 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 HIVEP1P15822 2718 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 CHKB-CPT1BH3BT56 60 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 COX8AP10176 69 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 SELENOWP63302 87 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 KLK9Q2XQG4 91 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 CCDC58Q4VC31 144 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 NEBP20929 6669 aa-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 SETD2Q9BYW2 2564 aaPredicted RBP-0.67□□□□□ -2.52
LINC00354-202ENST00000440860 SSSCA1O60232 199 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 WHAMMP3Q1A5X7 153 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 DEFB123Q8N688 67 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 TSC22D3Q99576 134 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 LINC00470Q9BZP3 86 aa-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 NXT2Q9NPJ8 142 aaKnown RBP-0.68□□□□□ -2.52
LINC00354-202ENST00000440860 HYDINQ4G0P3 5121 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 LOC105371267A0A1B0GV96 52 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 TMEM263Q8WUH6 116 aaKnown RBP-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 SPANXDQ9BXN6 97 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 IQSEC2Q5JU85 1478 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 FOCADQ5VW36 1801 aa-0.69□□□□□ -2.52
LINC00354-202ENST00000440860 BICRAQ9NZM4 1560 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 TGP01266 2768 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 MXRA5Q9NR99 2828 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 C10orf113Q5VZT2 155 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 COMMD6Q7Z4G1 85 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 USMG5Q96IX5 58 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 ARL2-SNX15V9GYD0 113 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 KIAA1109Q2LD37 5005 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 SETBP1Q9Y6X0 1596 aa-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 KTN1Q86UP2 1357 aaKnown RBP-0.7□□□□□ -2.52
LINC00354-202ENST00000440860 MYOM1P52179 1685 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 RYR3Q15413 4870 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 IGLC1P0CG04 106 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 C5orf38Q86SI9 138 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 FAM223AQ8IWN6 122 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 PRO1933Q9H354 126 aa-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 FLGP20930 4061 aaPredicted RBP-0.71□□□□□ -2.52
LINC00354-202ENST00000440860 RYR1P21817 5038 aa-0.72□□□□□ -2.52
LINC00354-202ENST00000440860 FAM107BQ9H098 131 aa-0.72□□□□□ -2.52
LINC00354-202ENST00000440860 UBR4Q5T4S7 5183 aa-0.72□□□□□ -2.53
LINC00354-202ENST00000440860 NSD3Q9BZ95 1437 aa-0.72□□□□□ -2.53
LINC00354-202ENST00000440860 EPPK1P58107 5090 aaKnown RBP-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 PRKDCP78527 4128 aaKnown RBP-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 KIAA0556O60303 1618 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 GNG11P61952 73 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 LINC01600Q96MT4 127 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 MANBALQ9NQG1 85 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 APLNQ9ULZ1 77 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 SVEP1Q4LDE5 3571 aa-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 MAGI1Q96QZ7 1491 aaPredicted RBP-0.73□□□□□ -2.53
LINC00354-202ENST00000440860 FMN2Q9NZ56 1722 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 LINC00959A0A1B0GUT2 108 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 TRAPPC2P0DI81 140 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 TRAPPC2BP0DI82 140 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 PCNX1Q96RV3 2341 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 USP9YO00507 2555 aaPredicted RBP-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 EPG5Q9HCE0 2579 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 HMGXB3Q12766 1538 aa-0.74□□□□□ -2.53
LINC00354-202ENST00000440860 A0A1B0GWA3 101 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 F6UZH7 168 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 AKAIN1P0CW23 69 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 FGF7P21781 194 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 C9orf153Q5TBE3 101 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 ITPR3Q14573 2671 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 ROBO1Q9Y6N7 1651 aa-0.75□□□□□ -2.53
LINC00354-202ENST00000440860 STARD9Q9P2P6 4700 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 UBE2L5PA0A1B0GUS4 154 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 SNAPC5O75971 98 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 UBE2L3P68036 154 aaKnown RBP-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 BTG2P78543 158 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 SFTA2Q6UW10 78 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 FAM167A-AS1Q96KT0 104 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 LINC00474Q9P2X8 69 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 SMG6Q86US8 1419 aaKnown RBP-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 TULP4Q9NRJ4 1543 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 ARHGEF5Q12774 1597 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 ZFHX3Q15911 3703 aa-0.76□□□□□ -2.53
LINC00354-202ENST00000440860 HECTD1Q9ULT8 2610 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 SCN7AQ01118 1682 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 SHROOM2Q13796 1616 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 MBD5Q9P267 1494 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 PKHD1P08F94 4074 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 FAM24AA6NFZ4 105 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 CPSF4LA6NMK7 179 aaKnown RBP-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 SEC11AP67812 179 aa-0.77□□□□□ -2.53
LINC00354-202ENST00000440860 DEFB135Q30KP9 77 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms