RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SH2D6Q7Z4S9 175 aa7.32□□□□□ -1.24
CPNE1-218ENST00000439806 RNF183Q96D59 192 aa7.32□□□□□ -1.24
CPNE1-218ENST00000439806 ZNF625Q96I27 306 aaPredicted RBP7.32□□□□□ -1.24
CPNE1-218ENST00000439806 CSMD2Q7Z408 3487 aa7.32□□□□□ -1.24
CPNE1-218ENST00000439806 CENPEQ02224 2701 aa7.31□□□□□ -1.24
CPNE1-218ENST00000439806 IGLV4-60A0A075B6I1 120 aa7.31□□□□□ -1.24
CPNE1-218ENST00000439806 TRBV30A0A0K0K1B3 111 aa7.31□□□□□ -1.24
CPNE1-218ENST00000439806 PAX4O43316 350 aa7.31□□□□□ -1.24
CPNE1-218ENST00000439806 DAD1P61803 113 aa7.31□□□□□ -1.24
CPNE1-218ENST00000439806 DAND5Q8N907 189 aa7.31□□□□□ -1.24
CPNE1-218ENST00000439806 COX7B2Q8TF08 81 aa7.31□□□□□ -1.24
CPNE1-218ENST00000439806 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 IGHV4-28A0A0C4DH34 117 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 A0A0U1RRA0 63 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 TMEM262E9PQX1 116 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 COX6CP09669 75 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 RPL13AP40429 203 aaKnown RBP7.3□□□□□ -1.24
CPNE1-218ENST00000439806 ATXN8Q156A1 80 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 LINC00308Q8TCZ7 52 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 TOMM7Q9P0U1 55 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 ICOSQ9Y6W8 199 aa7.3□□□□□ -1.24
CPNE1-218ENST00000439806 DEFB4AO15263 64 aa7.29□□□□□ -1.24
CPNE1-218ENST00000439806 MIFP14174 115 aa7.29□□□□□ -1.24
CPNE1-218ENST00000439806 SMCPP49901 116 aaPredicted RBP7.29□□□□□ -1.24
CPNE1-218ENST00000439806 SS18Q15532 418 aa7.29□□□□□ -1.24
CPNE1-218ENST00000439806 ANK3Q12955 4377 aaKnown RBP7.29□□□□□ -1.24
CPNE1-218ENST00000439806 A0A096LPF7 62 aa7.28□□□□□ -1.24
CPNE1-218ENST00000439806 C9JAW5 83 aa7.28□□□□□ -1.24
CPNE1-218ENST00000439806 TRIAP1O43715 76 aa7.28□□□□□ -1.24
CPNE1-218ENST00000439806 CHD6Q8TD26 2715 aa7.27□□□□□ -1.25
CPNE1-218ENST00000439806 LINC00959A0A1B0GUT2 108 aa7.27□□□□□ -1.25
CPNE1-218ENST00000439806 SLC25A20O43772 301 aa7.27□□□□□ -1.25
CPNE1-218ENST00000439806 ATP5G1P05496 136 aa7.27□□□□□ -1.25
CPNE1-218ENST00000439806 LINC01620Q4KN68 170 aa7.27□□□□□ -1.25
CPNE1-218ENST00000439806 WFDC9Q8NEX5 89 aa7.27□□□□□ -1.25
CPNE1-218ENST00000439806 PPDPFLQ8WWR9 84 aa7.27□□□□□ -1.25
CPNE1-218ENST00000439806 A0A087WZ39 114 aa7.26□□□□□ -1.25
CPNE1-218ENST00000439806 A0A1B0GUV1 79 aa7.26□□□□□ -1.25
CPNE1-218ENST00000439806 SPART-AS1P0CW21 52 aa7.26□□□□□ -1.25
CPNE1-218ENST00000439806 FOXI1Q12951 378 aa7.26□□□□□ -1.25
CPNE1-218ENST00000439806 C5orf38Q86SI9 138 aa7.26□□□□□ -1.25
CPNE1-218ENST00000439806 TEN1Q86WV5 123 aa7.26□□□□□ -1.25
CPNE1-218ENST00000439806 PPDPFQ9H3Y8 114 aa7.26□□□□□ -1.25
CPNE1-218ENST00000439806 IGHV3OR16-9A0A0B4J2B5 98 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 M0QXV9 152 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 WIPF1O43516 503 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 IGHV4-30-4P0DP06 118 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 HTN3P15516 51 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 SOSTDC1Q6X4U4 206 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 ANKRD29Q8N6D5 301 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 Q8NAQ8 132 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 CELA1Q9UNI1 258 aa7.25□□□□□ -1.25
CPNE1-218ENST00000439806 FASNP49327 2511 aaKnown RBP7.25□□□□□ -1.25
CPNE1-218ENST00000439806 NOTCH3Q9UM47 2321 aa7.24□□□□□ -1.25
CPNE1-218ENST00000439806 TRAV26-1A0A087WT03 109 aa7.24□□□□□ -1.25
CPNE1-218ENST00000439806 LINC00158P58513 81 aa7.24□□□□□ -1.25
CPNE1-218ENST00000439806 CLPSL2Q6UWE3 100 aa7.24□□□□□ -1.25
CPNE1-218ENST00000439806 TRBV10-2A0A0K0K1G8 114 aa7.23□□□□□ -1.25
CPNE1-218ENST00000439806 GAGE12HA6NDE8 117 aa7.23□□□□□ -1.25
CPNE1-218ENST00000439806 XCL1P47992 114 aa7.23□□□□□ -1.25
CPNE1-218ENST00000439806 MRPL23Q16540 153 aaKnown RBP7.23□□□□□ -1.25
CPNE1-218ENST00000439806 LINC01561Q8N1V8 128 aa7.23□□□□□ -1.25
CPNE1-218ENST00000439806 MIR7-3HGQ8N6C7 128 aa7.23□□□□□ -1.25
CPNE1-218ENST00000439806 MTORP42345 2549 aa7.22□□□□□ -1.25
CPNE1-218ENST00000439806 IBA57-AS1B1ANH7 110 aa7.22□□□□□ -1.25
CPNE1-218ENST00000439806 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
CPNE1-218ENST00000439806 CARD19Q96LW7 228 aa7.22□□□□□ -1.25
CPNE1-218ENST00000439806 ZNF469Q96JG9 3925 aaPredicted RBP7.21□□□□□ -1.26
CPNE1-218ENST00000439806 TRAV13-2A0A0B4J235 113 aa7.21□□□□□ -1.26
CPNE1-218ENST00000439806 CRPP02741 224 aa7.21□□□□□ -1.26
CPNE1-218ENST00000439806 ANGP03950 147 aaKnown RBP7.21□□□□□ -1.26
CPNE1-218ENST00000439806 C6orf226Q5I0X4 101 aa7.21□□□□□ -1.26
CPNE1-218ENST00000439806 C2orf82Q6UX34 121 aa7.21□□□□□ -1.26
CPNE1-218ENST00000439806 SIGMAR1Q99720 223 aa7.21□□□□□ -1.26
CPNE1-218ENST00000439806 SPATA25Q9BR10 227 aa7.21□□□□□ -1.26
CPNE1-218ENST00000439806 C11orf68Q9H3H3 251 aaKnown RBP7.21□□□□□ -1.26
CPNE1-218ENST00000439806 UNC79Q9P2D8 2635 aa7.21□□□□□ -1.26
CPNE1-218ENST00000439806 H3BT86 120 aa7.2□□□□□ -1.26
CPNE1-218ENST00000439806 LST1O00453 97 aa7.2□□□□□ -1.26
CPNE1-218ENST00000439806 COX7A2LO14548 114 aa7.2□□□□□ -1.26
CPNE1-218ENST00000439806 LELP1Q5T871 98 aa7.2□□□□□ -1.26
CPNE1-218ENST00000439806 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
CPNE1-218ENST00000439806 Q8IZM0 81 aa7.2□□□□□ -1.26
CPNE1-218ENST00000439806 NTN5Q8WTR8 489 aaPredicted RBP7.2□□□□□ -1.26
CPNE1-218ENST00000439806 SND1-IT1Q9HBX3 110 aa7.2□□□□□ -1.26
CPNE1-218ENST00000439806 FN1P02751 2386 aaKnown RBP7.19□□□□□ -1.26
CPNE1-218ENST00000439806 AKAP9Q99996 3911 aa7.19□□□□□ -1.26
CPNE1-218ENST00000439806 PFN2P35080 140 aa7.19□□□□□ -1.26
CPNE1-218ENST00000439806 REG3AQ06141 175 aa7.19□□□□□ -1.26
CPNE1-218ENST00000439806 CD164L2Q6UWJ8 174 aa7.19□□□□□ -1.26
CPNE1-218ENST00000439806 LINC00269Q8N2A0 174 aa7.19□□□□□ -1.26
CPNE1-218ENST00000439806 LINC01600Q96MT4 127 aa7.19□□□□□ -1.26
CPNE1-218ENST00000439806 ITPR2Q14571 2701 aa7.18□□□□□ -1.26
CPNE1-218ENST00000439806 A0A1B0GV72 72 aa7.18□□□□□ -1.26
CPNE1-218ENST00000439806 MALP21145 153 aa7.18□□□□□ -1.26
CPNE1-218ENST00000439806 KRTAP24-1Q3LI83 254 aa7.18□□□□□ -1.26
CPNE1-218ENST00000439806 OXLD1Q5BKU9 147 aa7.18□□□□□ -1.26
CPNE1-218ENST00000439806 SHISA2Q6UWI4 295 aa7.18□□□□□ -1.26
CPNE1-218ENST00000439806 C3orf56Q8N813 242 aa7.18□□□□□ -1.26
CPNE1-218ENST00000439806 CHCHD10Q8WYQ3 142 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms