RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 IGHV3OR16-9A0A0B4J2B5 98 aa8.46□□□□□ -1.06
SCLT1-202ENST00000439369 A0A0J9YXV3 536 aa8.46□□□□□ -1.06
SCLT1-202ENST00000439369 XCL1P47992 114 aa8.46□□□□□ -1.06
SCLT1-202ENST00000439369 FOXI1Q12951 378 aa8.46□□□□□ -1.06
SCLT1-202ENST00000439369 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.06
SCLT1-202ENST00000439369 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
SCLT1-202ENST00000439369 H0Y8G0 127 aa8.45□□□□□ -1.06
SCLT1-202ENST00000439369 COX7A2LO14548 114 aa8.45□□□□□ -1.06
SCLT1-202ENST00000439369 DPM2O94777 84 aa8.45□□□□□ -1.06
SCLT1-202ENST00000439369 Q6ZRN7 208 aaPredicted RBP8.45□□□□□ -1.06
SCLT1-202ENST00000439369 CHAC1Q9BUX1 264 aa8.45□□□□□ -1.06
SCLT1-202ENST00000439369 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
SCLT1-202ENST00000439369 PLECQ15149 4684 aaKnown RBP8.44□□□□□ -1.06
SCLT1-202ENST00000439369 A0A087WZ39 114 aa8.44□□□□□ -1.06
SCLT1-202ENST00000439369 H3BRM9 83 aa8.44□□□□□ -1.06
SCLT1-202ENST00000439369 OR10D4PQ8NGN7 298 aa8.44□□□□□ -1.06
SCLT1-202ENST00000439369 C11orf86A6NJI1 115 aa8.43□□□□□ -1.06
SCLT1-202ENST00000439369 PSCAO43653 123 aa8.43□□□□□ -1.06
SCLT1-202ENST00000439369 IGKCP01834 107 aa8.43□□□□□ -1.06
SCLT1-202ENST00000439369 COX6A2Q02221 97 aa8.43□□□□□ -1.06
SCLT1-202ENST00000439369 LINC00469Q8N7U9 141 aa8.43□□□□□ -1.06
SCLT1-202ENST00000439369 APOMO95445 188 aa8.42□□□□□ -1.06
SCLT1-202ENST00000439369 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
SCLT1-202ENST00000439369 CFAP161Q6P656 301 aa8.42□□□□□ -1.06
SCLT1-202ENST00000439369 CDKN2A-AS1Q9UH64 79 aa8.42□□□□□ -1.06
SCLT1-202ENST00000439369 VPS13DQ5THJ4 4388 aa8.42□□□□□ -1.06
SCLT1-202ENST00000439369 IGHV1-58A0A0C4DH39 117 aa8.41□□□□□ -1.06
SCLT1-202ENST00000439369 MALP21145 153 aa8.41□□□□□ -1.06
SCLT1-202ENST00000439369 C14orf177Q52M58 125 aa8.4□□□□□ -1.06
SCLT1-202ENST00000439369 TMEM170BQ5T4T1 132 aa8.4□□□□□ -1.06
SCLT1-202ENST00000439369 C5orf38Q86SI9 138 aa8.4□□□□□ -1.06
SCLT1-202ENST00000439369 PMCHL2Q9BQD1 86 aa8.4□□□□□ -1.06
SCLT1-202ENST00000439369 IGHV3-64A0A075B6Q5 118 aa8.39□□□□□ -1.07
SCLT1-202ENST00000439369 JOSD1Q15040 202 aaPredicted RBP8.39□□□□□ -1.07
SCLT1-202ENST00000439369 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
SCLT1-202ENST00000439369 GVQW2A0A096LPI5 108 aaPredicted RBP8.38□□□□□ -1.07
SCLT1-202ENST00000439369 TMEM223A0PJW6 202 aa8.38□□□□□ -1.07
SCLT1-202ENST00000439369 SMIM1B2RUZ4 78 aa8.38□□□□□ -1.07
SCLT1-202ENST00000439369 F8WDY8 70 aa8.38□□□□□ -1.07
SCLT1-202ENST00000439369 RTL8CO15255 209 aa8.38□□□□□ -1.07
SCLT1-202ENST00000439369 HERVK_113P61574 105 aa8.38□□□□□ -1.07
SCLT1-202ENST00000439369 LINC00336Q6ZUF6 198 aa8.38□□□□□ -1.07
SCLT1-202ENST00000439369 DNAH1Q9P2D7 4330 aa8.38□□□□□ -1.07
SCLT1-202ENST00000439369 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
SCLT1-202ENST00000439369 LRCOL1A6NCL2 159 aa8.37□□□□□ -1.07
SCLT1-202ENST00000439369 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
SCLT1-202ENST00000439369 SCGB1D1O95968 90 aa8.37□□□□□ -1.07
SCLT1-202ENST00000439369 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
SCLT1-202ENST00000439369 Q8IZM0 81 aa8.36□□□□□ -1.07
SCLT1-202ENST00000439369 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
SCLT1-202ENST00000439369 A0A087WTM6 91 aa8.35□□□□□ -1.07
SCLT1-202ENST00000439369 EREGO14944 169 aa8.35□□□□□ -1.07
SCLT1-202ENST00000439369 SPINK8P0C7L1 97 aa8.35□□□□□ -1.07
SCLT1-202ENST00000439369 C2orf48Q96LS8 159 aa8.35□□□□□ -1.07
SCLT1-202ENST00000439369 DNAH6Q9C0G6 4158 aa8.34□□□□□ -1.07
SCLT1-202ENST00000439369 E9PLD3 99 aa8.34□□□□□ -1.07
SCLT1-202ENST00000439369 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
SCLT1-202ENST00000439369 SPAG11BQ08648 103 aa8.34□□□□□ -1.07
SCLT1-202ENST00000439369 SFTA2Q6UW10 78 aa8.34□□□□□ -1.07
SCLT1-202ENST00000439369 PLEKHB2Q96CS7 222 aa8.34□□□□□ -1.07
SCLT1-202ENST00000439369 LYSTQ99698 3801 aa8.34□□□□□ -1.07
SCLT1-202ENST00000439369 LOC105371267A0A1B0GV96 52 aa8.33□□□□□ -1.08
SCLT1-202ENST00000439369 HSBP1L1C9JCN9 74 aa8.33□□□□□ -1.08
SCLT1-202ENST00000439369 PRSS2P07478 247 aa8.33□□□□□ -1.08
SCLT1-202ENST00000439369 CXCL5P42830 114 aa8.33□□□□□ -1.08
SCLT1-202ENST00000439369 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
SCLT1-202ENST00000439369 PYY3Q5JQD4 70 aa8.33□□□□□ -1.08
SCLT1-202ENST00000439369 COX7B2Q8TF08 81 aa8.33□□□□□ -1.08
SCLT1-202ENST00000439369 hDV102S1A0JD36 115 aa8.32□□□□□ -1.08
SCLT1-202ENST00000439369 LEPROTO15243 131 aa8.32□□□□□ -1.08
SCLT1-202ENST00000439369 TNP2Q05952 138 aa8.32□□□□□ -1.08
SCLT1-202ENST00000439369 WFDC2Q14508 124 aa8.32□□□□□ -1.08
SCLT1-202ENST00000439369 C6orf226Q5I0X4 101 aa8.32□□□□□ -1.08
SCLT1-202ENST00000439369 ATOH7Q8N100 152 aa8.32□□□□□ -1.08
SCLT1-202ENST00000439369 Q8N814 137 aa8.32□□□□□ -1.08
SCLT1-202ENST00000439369 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
SCLT1-202ENST00000439369 LECT2O14960 151 aa8.31□□□□□ -1.08
SCLT1-202ENST00000439369 CNBPP62633 177 aaKnown RBP8.31□□□□□ -1.08
SCLT1-202ENST00000439369 STPG4Q8N801 248 aa8.31□□□□□ -1.08
SCLT1-202ENST00000439369 TOMM7Q9P0U1 55 aa8.31□□□□□ -1.08
SCLT1-202ENST00000439369 J3QQQ9 107 aa8.3□□□□□ -1.08
SCLT1-202ENST00000439369 SMIM6P0DI80 62 aa8.3□□□□□ -1.08
SCLT1-202ENST00000439369 NMUP48645 174 aa8.3□□□□□ -1.08
SCLT1-202ENST00000439369 CKS1BP61024 79 aa8.3□□□□□ -1.08
SCLT1-202ENST00000439369 HIGD2BQ4VC39 106 aa8.3□□□□□ -1.08
SCLT1-202ENST00000439369 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.29□□□□□ -1.08
SCLT1-202ENST00000439369 NDUFA1O15239 70 aa8.29□□□□□ -1.08
SCLT1-202ENST00000439369 RNF151Q2KHN1 245 aa8.29□□□□□ -1.08
SCLT1-202ENST00000439369 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
SCLT1-202ENST00000439369 VAMP8Q9BV40 100 aa8.29□□□□□ -1.08
SCLT1-202ENST00000439369 LGALS3P17931 250 aaKnown RBP8.28□□□□□ -1.08
SCLT1-202ENST00000439369 HERV-K104P63124 156 aa8.28□□□□□ -1.08
SCLT1-202ENST00000439369 SYCNQ0VAF6 134 aa8.28□□□□□ -1.08
SCLT1-202ENST00000439369 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
SCLT1-202ENST00000439369 ZNF625Q96I27 306 aaPredicted RBP8.28□□□□□ -1.08
SCLT1-202ENST00000439369 PKIGQ9Y2B9 76 aa8.28□□□□□ -1.08
SCLT1-202ENST00000439369 TRBV30A0A0K0K1B3 111 aa8.27□□□□□ -1.09
SCLT1-202ENST00000439369 MYMXA0A1B0GTQ4 84 aa8.27□□□□□ -1.09
SCLT1-202ENST00000439369 CDPF1Q6NVV7 123 aa8.27□□□□□ -1.09
SCLT1-202ENST00000439369 CARD19Q96LW7 228 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms