RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ZGRF1Q86YA3 2104 aa1.98□□□□□ -2.09
HMGB1P45-201ENST00000435986 R4GMQ9 66 aa1.98□□□□□ -2.09
HMGB1P45-201ENST00000435986 ARL2-SNX15V9GYD0 113 aa1.98□□□□□ -2.09
HMGB1P45-201ENST00000435986 KIAA0100Q14667 2235 aaKnown RBP1.98□□□□□ -2.09
HMGB1P45-201ENST00000435986 CACNA1GO43497 2377 aa1.98□□□□□ -2.09
HMGB1P45-201ENST00000435986 RGPD5Q99666 1765 aa1.98□□□□□ -2.09
HMGB1P45-201ENST00000435986 PCNTO95613 3336 aa1.97□□□□□ -2.09
HMGB1P45-201ENST00000435986 FMN2Q9NZ56 1722 aa1.97□□□□□ -2.09
HMGB1P45-201ENST00000435986 PLXNA1Q9UIW2 1896 aa1.97□□□□□ -2.09
HMGB1P45-201ENST00000435986 RALGAPBQ86X10 1494 aa1.97□□□□□ -2.09
HMGB1P45-201ENST00000435986 DEFB103AP81534 67 aa1.97□□□□□ -2.09
HMGB1P45-201ENST00000435986 LRRC37A3O60309 1634 aa1.97□□□□□ -2.09
HMGB1P45-201ENST00000435986 TNRC18O15417 2968 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P45-201ENST00000435986 COL4A6Q14031 1691 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 MYH4Q9Y623 1939 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 MDC1Q14676 2089 aaKnown RBP1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 IGKV3D-7A0A0C4DH55 119 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 IGKV3OR2-268A0A0C4DH90 116 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 MYMXA0A1B0GTQ4 84 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 IQCF6A8MYZ5 107 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 UMAD1C9J7I0 102 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 INE1O15225 51 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 AMELXQ99217 191 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 V9GYV3 84 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 ADGRB2O60241 1585 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 NEXMIFQ5QGS0 1516 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 LMTK2Q8IWU2 1503 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 KIF1AQ12756 1690 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 ALS2Q96Q42 1657 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 DOCK2Q92608 1830 aa1.96□□□□□ -2.1
HMGB1P45-201ENST00000435986 SPAG17Q6Q759 2223 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 UNC13CQ8NB66 2214 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 LTN1O94822 1766 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 COL14A1Q05707 1796 aaKnown RBP1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 SCN11AQ9UI33 1791 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 PHRF1Q9P1Y6 1649 aaKnown RBP1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 PARP4Q9UKK3 1724 aaKnown RBP1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 A0A087WWC5 75 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 A0A1B0GWA3 101 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 C7orf77A4D0Y5 90 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 FAM223BA6NKX1 122 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 F8VRH5 84 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 M0R2N4 97 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 IL9P15248 144 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 FXYD3Q14802 87 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 PLGLAQ15195 96 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 PSENENQ9NZ42 101 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 CEP192Q8TEP8 1941 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 BAZ2BQ9UIF8 2168 aaKnown RBP1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 ZFHX2Q9C0A1 2572 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 CLTCL1P53675 1640 aa1.95□□□□□ -2.1
HMGB1P45-201ENST00000435986 MRC1P22897 1456 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 C1orf167Q5SNV9 1468 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 GBF1Q92538 1859 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 QSER1Q2KHR3 1735 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 KNDC1Q76NI1 1749 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 NRXN2Q9P2S2 1712 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 BRWD1Q9NSI6 2320 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 IGKV2-40A0A087WW87 121 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 NBDYA0A0U1RRE5 68 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 IGKV2-29A2NJV5 120 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 C10orf142B7Z368 130 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 IGKV2D-40P01614 121 aaPredicted RBP1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 CCL18P55774 89 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 BTAF1O14981 1849 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 SIP14410 1827 aa1.94□□□□□ -2.1
HMGB1P45-201ENST00000435986 CDC42BPGQ6DT37 1551 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 CEBPZOSA8MTT3 80 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 LEPROTL1O95214 131 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 ARMS2P0C7Q2 107 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 FXYD4P59646 89 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 DEFB121Q5J5C9 76 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 C6orf201Q7Z4U5 140 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 C5orf56Q8N8D9 126 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 PRR15LQ9BU68 103 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 SNURFQ9Y675 71 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 DLEC1Q9Y238 1755 aa1.93□□□□□ -2.1
HMGB1P45-201ENST00000435986 EXPH5Q8NEV8 1989 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 ARFGEF3Q5TH69 2177 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 PAPPAQ13219 1627 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 ITSN1Q15811 1721 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 CR1P17927 2039 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 LOC110117498A0A087WWA1 95 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 D6R8Y8 96 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 M0R135 149 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 BAGE2Q86Y30 109 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 MUSTN1Q8IVN3 82 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 ZNF563Q8TA94 476 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 ZNF625Q96I27 306 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 LINC01558Q9Y6Z2 57 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 LMO7Q8WWI1 1683 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 RGPD2P0DJD1 1756 aa1.92□□□□□ -2.1
HMGB1P45-201ENST00000435986 LY75O60449 1722 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 PKD1L3Q7Z443 1732 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 PI4KAP42356 2102 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 ESPL1Q14674 2120 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 ALPK2Q86TB3 2170 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 DOCK10Q96BY6 2186 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 NHSQ6T4R5 1651 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 1067.5 ms