RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 PTPN13Q12923 2485 aa7.72□□□□□ -1.17
ATP2C1-204ENST00000428331 ORMDL1Q9P0S3 153 aa7.72□□□□□ -1.17
ATP2C1-204ENST00000428331 SPTBN4Q9H254 2564 aa7.72□□□□□ -1.17
ATP2C1-204ENST00000428331 TRAV25A0A0B4J276 109 aa7.71□□□□□ -1.17
ATP2C1-204ENST00000428331 C18orf65Q6ZTR6 163 aa7.71□□□□□ -1.17
ATP2C1-204ENST00000428331 C11orf44Q8N8P7 122 aa7.71□□□□□ -1.17
ATP2C1-204ENST00000428331 C11orf68Q9H3H3 251 aaKnown RBP7.71□□□□□ -1.17
ATP2C1-204ENST00000428331 C5orf38Q86SI9 138 aa7.71□□□□□ -1.17
ATP2C1-204ENST00000428331 A8MTW9 85 aa7.71□□□□□ -1.18
ATP2C1-204ENST00000428331 RNASE1P07998 156 aaKnown RBP7.71□□□□□ -1.18
ATP2C1-204ENST00000428331 SDIM1Q6ZPB5 146 aa7.71□□□□□ -1.18
ATP2C1-204ENST00000428331 NRGNQ92686 78 aa7.71□□□□□ -1.18
ATP2C1-204ENST00000428331 IBA57-AS1B1ANH7 110 aa7.7□□□□□ -1.18
ATP2C1-204ENST00000428331 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
ATP2C1-204ENST00000428331 SS18Q15532 418 aa7.69□□□□□ -1.18
ATP2C1-204ENST00000428331 FAM218AQ96MZ4 157 aa7.69□□□□□ -1.18
ATP2C1-204ENST00000428331 RPL35AP18077 110 aaKnown RBP7.69□□□□□ -1.18
ATP2C1-204ENST00000428331 RPL18AQ02543 176 aaKnown RBP7.69□□□□□ -1.18
ATP2C1-204ENST00000428331 SMCR5Q8TEV8 140 aa7.69□□□□□ -1.18
ATP2C1-204ENST00000428331 C16orf74Q96GX8 76 aa7.68□□□□□ -1.18
ATP2C1-204ENST00000428331 NTM-AS1Q6ZSK4 140 aa7.68□□□□□ -1.18
ATP2C1-204ENST00000428331 CCL18P55774 89 aa7.68□□□□□ -1.18
ATP2C1-204ENST00000428331 C1orf158Q8N1D5 194 aa7.68□□□□□ -1.18
ATP2C1-204ENST00000428331 LINC00337Q8N6G1 96 aa7.68□□□□□ -1.18
ATP2C1-204ENST00000428331 NAV2Q8IVL1 2488 aa7.68□□□□□ -1.18
ATP2C1-204ENST00000428331 hADV29S1A0JD25 119 aa7.67□□□□□ -1.18
ATP2C1-204ENST00000428331 FAM19A3Q7Z5A8 133 aa7.67□□□□□ -1.18
ATP2C1-204ENST00000428331 V9GYY9 64 aa7.67□□□□□ -1.18
ATP2C1-204ENST00000428331 ODF3L2Q3SX64 289 aa7.67□□□□□ -1.18
ATP2C1-204ENST00000428331 Q6JHZ5 121 aa7.67□□□□□ -1.18
ATP2C1-204ENST00000428331 TLN2Q9Y4G6 2542 aa7.67□□□□□ -1.18
ATP2C1-204ENST00000428331 JMJD7-PLA2G4BH0Y9G9 81 aa7.67□□□□□ -1.18
ATP2C1-204ENST00000428331 SMIM9A6NGZ8 99 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 LRRC75A-AS1Q8N1F1 130 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 LAMA5O15230 3695 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 A0A087WYN8 130 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 CCL24O00175 119 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 SERP2Q8N6R1 65 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 HRNRQ86YZ3 2850 aaPredicted RBP7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 LOC107984640A0A0U1RRK4 108 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 NCR3O14931 201 aa7.66□□□□□ -1.18
ATP2C1-204ENST00000428331 DCHS2Q6V1P9 2916 aa7.65□□□□□ -1.18
ATP2C1-204ENST00000428331 XCL1P47992 114 aa7.65□□□□□ -1.18
ATP2C1-204ENST00000428331 HRCT1Q6UXD1 115 aa7.65□□□□□ -1.18
ATP2C1-204ENST00000428331 MAP1AP78559 2803 aaPredicted RBP7.65□□□□□ -1.19
ATP2C1-204ENST00000428331 SLPIP03973 132 aa7.64□□□□□ -1.19
ATP2C1-204ENST00000428331 KLK5Q9Y337 293 aaPredicted RBP7.64□□□□□ -1.19
ATP2C1-204ENST00000428331 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
ATP2C1-204ENST00000428331 DEFB130BP0DP73 79 aa7.64□□□□□ -1.19
ATP2C1-204ENST00000428331 DEFB130AP0DP74 79 aa7.64□□□□□ -1.19
ATP2C1-204ENST00000428331 Q96MF0 132 aa7.64□□□□□ -1.19
ATP2C1-204ENST00000428331 USP17L23D6RBM5 183 aa7.64□□□□□ -1.19
ATP2C1-204ENST00000428331 DOPEY1Q5JWR5 2465 aa7.64□□□□□ -1.19
ATP2C1-204ENST00000428331 SONP18583 2426 aaKnown RBP7.63□□□□□ -1.19
ATP2C1-204ENST00000428331 LOC100131303A0A0U1RQF7 123 aa7.63□□□□□ -1.19
ATP2C1-204ENST00000428331 CRYGAP11844 174 aa7.63□□□□□ -1.19
ATP2C1-204ENST00000428331 TMEM256-PLSCR3K7ERE1 68 aa7.63□□□□□ -1.19
ATP2C1-204ENST00000428331 LINC00846Q9NV44 126 aa7.63□□□□□ -1.19
ATP2C1-204ENST00000428331 MYO18BQ8IUG5 2567 aa7.63□□□□□ -1.19
ATP2C1-204ENST00000428331 BRK1Q8WUW1 75 aa7.63□□□□□ -1.19
ATP2C1-204ENST00000428331 SETD2Q9BYW2 2564 aaPredicted RBP7.63□□□□□ -1.19
ATP2C1-204ENST00000428331 TMEM258P61165 79 aa7.62□□□□□ -1.19
ATP2C1-204ENST00000428331 A0A087WZ39 114 aa7.62□□□□□ -1.19
ATP2C1-204ENST00000428331 IGHV4-31P0DP07 118 aa7.62□□□□□ -1.19
ATP2C1-204ENST00000428331 POLQO75417 2590 aa7.62□□□□□ -1.19
ATP2C1-204ENST00000428331 IGKV2-28A0A075B6P5 120 aa7.62□□□□□ -1.19
ATP2C1-204ENST00000428331 IGKV2D-28P01615 120 aa7.62□□□□□ -1.19
ATP2C1-204ENST00000428331 LAMTOR3Q9UHA4 124 aa7.62□□□□□ -1.19
ATP2C1-204ENST00000428331 CSMD1Q96PZ7 3565 aa7.61□□□□□ -1.19
ATP2C1-204ENST00000428331 ATP5EP2Q5VTU8 51 aa7.61□□□□□ -1.19
ATP2C1-204ENST00000428331 ASH1LQ9NR48 2969 aaKnown RBP7.61□□□□□ -1.19
ATP2C1-204ENST00000428331 SPENQ96T58 3664 aaKnown RBP7.61□□□□□ -1.19
ATP2C1-204ENST00000428331 IGLV4-60A0A075B6I1 120 aa7.61□□□□□ -1.19
ATP2C1-204ENST00000428331 IGHV3OR16-9A0A0B4J2B5 98 aa7.6□□□□□ -1.19
ATP2C1-204ENST00000428331 SEC61GP60059 68 aa7.6□□□□□ -1.19
ATP2C1-204ENST00000428331 RETNQ9HD89 108 aa7.6□□□□□ -1.19
ATP2C1-204ENST00000428331 A0A087WVE0 104 aa7.6□□□□□ -1.19
ATP2C1-204ENST00000428331 CLPSL2Q6UWE3 100 aa7.6□□□□□ -1.19
ATP2C1-204ENST00000428331 LINC00959A0A1B0GUT2 108 aa7.6□□□□□ -1.19
ATP2C1-204ENST00000428331 CCKP06307 115 aa7.6□□□□□ -1.19
ATP2C1-204ENST00000428331 ANKRD17O75179 2603 aaKnown RBP7.59□□□□□ -1.19
ATP2C1-204ENST00000428331 GHRHP01286 108 aa7.59□□□□□ -1.19
ATP2C1-204ENST00000428331 GYPEP15421 78 aa7.59□□□□□ -1.19
ATP2C1-204ENST00000428331 CCDC168Q8NDH2 2452 aa7.59□□□□□ -1.19
ATP2C1-204ENST00000428331 WFDC11Q8NEX6 87 aa7.59□□□□□ -1.2
ATP2C1-204ENST00000428331 JMJD1CQ15652 2540 aa7.59□□□□□ -1.2
ATP2C1-204ENST00000428331 FAM19A5Q7Z5A7 132 aaPredicted RBP7.58□□□□□ -1.2
ATP2C1-204ENST00000428331 TRAV23DV6A0A075B6W5 121 aa7.57□□□□□ -1.2
ATP2C1-204ENST00000428331 RPS28P62857 69 aaKnown RBP7.57□□□□□ -1.2
ATP2C1-204ENST00000428331 FN1P02751 2386 aaKnown RBP7.57□□□□□ -1.2
ATP2C1-204ENST00000428331 Q8IZM0 81 aa7.57□□□□□ -1.2
ATP2C1-204ENST00000428331 HAMPP81172 84 aa7.56□□□□□ -1.2
ATP2C1-204ENST00000428331 IL17DQ8TAD2 202 aa7.56□□□□□ -1.2
ATP2C1-204ENST00000428331 RBM3P98179 157 aaKnown RBP7.56□□□□□ -1.2
ATP2C1-204ENST00000428331 A0A096LPF7 62 aa7.55□□□□□ -1.2
ATP2C1-204ENST00000428331 FSHBP01225 129 aa7.55□□□□□ -1.2
ATP2C1-204ENST00000428331 DEFB113Q30KQ7 82 aa7.55□□□□□ -1.2
ATP2C1-204ENST00000428331 ENHOQ6UWT2 76 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms