RNA–Protein interactions for RNA: ENST00000428193.6

RPL28-203, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-203ENST00000428193 PLAC8Q9NZF1 115 aa9.69□□□□□ -0.86
RPL28-203ENST00000428193 PKHD1L1Q86WI1 4243 aa9.68□□□□□ -0.86
RPL28-203ENST00000428193 IGLV4-3A0A075B6K6 122 aa9.68□□□□□ -0.86
RPL28-203ENST00000428193 PRSS47A8MTI9 375 aa9.68□□□□□ -0.86
RPL28-203ENST00000428193 S100PP25815 95 aa9.68□□□□□ -0.86
RPL28-203ENST00000428193 HNRNPA3P51991 378 aaKnown RBP9.68□□□□□ -0.86
RPL28-203ENST00000428193 ORAOV1Q8WV07 137 aa9.68□□□□□ -0.86
RPL28-203ENST00000428193 CYSLTR1Q9Y271 337 aa9.68□□□□□ -0.86
RPL28-203ENST00000428193 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
RPL28-203ENST00000428193 GAGE2BQ13066 116 aa9.67□□□□□ -0.86
RPL28-203ENST00000428193 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
RPL28-203ENST00000428193 C2orf66Q6UXQ4 117 aa9.67□□□□□ -0.86
RPL28-203ENST00000428193 TMEM141Q96I45 108 aa9.67□□□□□ -0.86
RPL28-203ENST00000428193 PYGO1Q9Y3Y4 419 aa9.67□□□□□ -0.86
RPL28-203ENST00000428193 HERC1Q15751 4861 aa9.67□□□□□ -0.86
RPL28-203ENST00000428193 TRAV9-1A0A075B6T8 112 aa9.66□□□□□ -0.86
RPL28-203ENST00000428193 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
RPL28-203ENST00000428193 IGHV3OR16-9A0A0B4J2B5 98 aa9.66□□□□□ -0.86
RPL28-203ENST00000428193 ORMDL2Q53FV1 153 aa9.66□□□□□ -0.86
RPL28-203ENST00000428193 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
RPL28-203ENST00000428193 C7orf33Q8WU49 177 aa9.66□□□□□ -0.86
RPL28-203ENST00000428193 DMBT1Q9UGM3 2413 aaPredicted RBP9.65□□□□□ -0.86
RPL28-203ENST00000428193 LOC107984640A0A0U1RRK4 108 aa9.65□□□□□ -0.86
RPL28-203ENST00000428193 Q6ZN92 141 aa9.65□□□□□ -0.86
RPL28-203ENST00000428193 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
RPL28-203ENST00000428193 C2orf48Q96LS8 159 aa9.65□□□□□ -0.86
RPL28-203ENST00000428193 C2orf88Q9BSF0 95 aa9.65□□□□□ -0.86
RPL28-203ENST00000428193 NXT2Q9NPJ8 142 aaKnown RBP9.65□□□□□ -0.86
RPL28-203ENST00000428193 RPS10P5Q9NQ39 176 aa9.65□□□□□ -0.86
RPL28-203ENST00000428193 A0A0J9YXV3 536 aa9.64□□□□□ -0.87
RPL28-203ENST00000428193 KRTAP29-1A8MX34 341 aaPredicted RBP9.64□□□□□ -0.87
RPL28-203ENST00000428193 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
RPL28-203ENST00000428193 LINC00474Q9P2X8 69 aa9.64□□□□□ -0.87
RPL28-203ENST00000428193 PTTG1IPP53801 180 aa9.63□□□□□ -0.87
RPL28-203ENST00000428193 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
RPL28-203ENST00000428193 FAT3Q8TDW7 4589 aa9.63□□□□□ -0.87
RPL28-203ENST00000428193 K7EMI3 77 aa9.62□□□□□ -0.87
RPL28-203ENST00000428193 UBE2D1P51668 147 aa9.62□□□□□ -0.87
RPL28-203ENST00000428193 VCX2Q9H322 139 aa9.62□□□□□ -0.87
RPL28-203ENST00000428193 LRP1Q07954 4544 aaKnown RBP9.61□□□□□ -0.87
RPL28-203ENST00000428193 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
RPL28-203ENST00000428193 RHEBQ15382 184 aa9.61□□□□□ -0.87
RPL28-203ENST00000428193 C10orf91Q5T1B1 145 aa9.61□□□□□ -0.87
RPL28-203ENST00000428193 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
RPL28-203ENST00000428193 GNB1LQ9BYB4 327 aa9.61□□□□□ -0.87
RPL28-203ENST00000428193 CARHSP1Q9Y2V2 147 aaKnown RBP9.61□□□□□ -0.87
RPL28-203ENST00000428193 A0A087WZ39 114 aa9.6□□□□□ -0.87
RPL28-203ENST00000428193 NDUFA1O15239 70 aa9.6□□□□□ -0.87
RPL28-203ENST00000428193 FABP9Q0Z7S8 132 aa9.6□□□□□ -0.87
RPL28-203ENST00000428193 IGIPA6NJ69 53 aa9.59□□□□□ -0.87
RPL28-203ENST00000428193 G0S2P27469 103 aa9.59□□□□□ -0.87
RPL28-203ENST00000428193 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
RPL28-203ENST00000428193 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
RPL28-203ENST00000428193 AMELXQ99217 191 aa9.59□□□□□ -0.87
RPL28-203ENST00000428193 ALKBH7Q9BT30 221 aaPredicted RBP9.59□□□□□ -0.87
RPL28-203ENST00000428193 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
RPL28-203ENST00000428193 OXTP01178 125 aa9.58□□□□□ -0.88
RPL28-203ENST00000428193 APOC3P02656 99 aa9.58□□□□□ -0.88
RPL28-203ENST00000428193 COX19Q49B96 90 aa9.58□□□□□ -0.88
RPL28-203ENST00000428193 TOMM6Q96B49 74 aa9.58□□□□□ -0.88
RPL28-203ENST00000428193 MRPL35Q9NZE8 188 aaKnown RBP9.58□□□□□ -0.88
RPL28-203ENST00000428193 MT-ND6P03923 174 aa9.57□□□□□ -0.88
RPL28-203ENST00000428193 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
RPL28-203ENST00000428193 RNF151Q2KHN1 245 aa9.57□□□□□ -0.88
RPL28-203ENST00000428193 PAPPA-AS1Q5QFB9 102 aa9.57□□□□□ -0.88
RPL28-203ENST00000428193 SCGB3A1Q96QR1 104 aa9.57□□□□□ -0.88
RPL28-203ENST00000428193 TOMM7Q9P0U1 55 aa9.57□□□□□ -0.88
RPL28-203ENST00000428193 C6orf48Q9UBA6 75 aa9.57□□□□□ -0.88
RPL28-203ENST00000428193 A0A1W2PNN7 141 aa9.56□□□□□ -0.88
RPL28-203ENST00000428193 F8WDY8 70 aa9.56□□□□□ -0.88
RPL28-203ENST00000428193 NPSP0C0P6 89 aa9.56□□□□□ -0.88
RPL28-203ENST00000428193 C9orf116Q5BN46 136 aaPredicted RBP9.56□□□□□ -0.88
RPL28-203ENST00000428193 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
RPL28-203ENST00000428193 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
RPL28-203ENST00000428193 TIMM17AQ99595 171 aa9.56□□□□□ -0.88
RPL28-203ENST00000428193 SMCO4Q9NRQ5 59 aa9.56□□□□□ -0.88
RPL28-203ENST00000428193 KIAA0087Q14695 138 aa9.55□□□□□ -0.88
RPL28-203ENST00000428193 NDUFA5Q16718 116 aa9.55□□□□□ -0.88
RPL28-203ENST00000428193 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
RPL28-203ENST00000428193 PRSS2P07478 247 aa9.54□□□□□ -0.88
RPL28-203ENST00000428193 GAGE2EQ4V326 116 aa9.54□□□□□ -0.88
RPL28-203ENST00000428193 ERASQ7Z444 233 aa9.54□□□□□ -0.88
RPL28-203ENST00000428193 PACRGQ96M98 296 aaPredicted RBP9.54□□□□□ -0.88
RPL28-203ENST00000428193 GAGE2DQ9UEU5 116 aa9.54□□□□□ -0.88
RPL28-203ENST00000428193 SNAPINO95295 136 aa9.53□□□□□ -0.88
RPL28-203ENST00000428193 HERVK_113P63121 156 aa9.53□□□□□ -0.88
RPL28-203ENST00000428193 Q6ZRP5 223 aa9.53□□□□□ -0.88
RPL28-203ENST00000428193 LINC01561Q8N1V8 128 aa9.53□□□□□ -0.88
RPL28-203ENST00000428193 CDKN2A-AS1Q9UH64 79 aa9.53□□□□□ -0.88
RPL28-203ENST00000428193 TRAPPC1Q9Y5R8 145 aa9.53□□□□□ -0.88
RPL28-203ENST00000428193 SEC11AP67812 179 aa9.52□□□□□ -0.89
RPL28-203ENST00000428193 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
RPL28-203ENST00000428193 SVBPQ8N300 66 aa9.52□□□□□ -0.89
RPL28-203ENST00000428193 FAM168BA1KXE4 195 aa9.51□□□□□ -0.89
RPL28-203ENST00000428193 CKS1BP61024 79 aa9.51□□□□□ -0.89
RPL28-203ENST00000428193 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
RPL28-203ENST00000428193 FAM19A5Q7Z5A7 132 aaPredicted RBP9.51□□□□□ -0.89
RPL28-203ENST00000428193 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
RPL28-203ENST00000428193 LINC00469Q8N7U9 141 aa9.51□□□□□ -0.89
RPL28-203ENST00000428193 TRBV30A0A0K0K1B3 111 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms