RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MRPS36P82909 103 aaKnown RBP4.21□□□□□ -1.73
HERC4-206ENST00000427635 CHCHD7Q9BUK0 85 aa4.21□□□□□ -1.73
HERC4-206ENST00000427635 WFDC10AQ9H1F0 79 aa4.21□□□□□ -1.73
HERC4-206ENST00000427635 ARID1AO14497 2285 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 C18orf65Q6ZTR6 163 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 LINC00959A0A1B0GUT2 108 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 TMEM223A0PJW6 202 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 A0A0J9YXY3 114 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 ZNF73O43830 326 aaPredicted RBP4.21□□□□□ -1.74
HERC4-206ENST00000427635 Q6JHZ5 121 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 FAM19A3Q7Z5A8 133 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 TEN1Q86WV5 123 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 CSPG4Q6UVK1 2322 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 HEATR5AQ86XA9 2040 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 ALPK2Q86TB3 2170 aa4.21□□□□□ -1.74
HERC4-206ENST00000427635 C6orf223Q8N319 242 aa4.2□□□□□ -1.74
HERC4-206ENST00000427635 C1orf147Q96MC9 270 aaPredicted RBP4.2□□□□□ -1.74
HERC4-206ENST00000427635 PRR15Q8IV56 129 aa4.2□□□□□ -1.74
HERC4-206ENST00000427635 DOCK7Q96N67 2140 aa4.2□□□□□ -1.74
HERC4-206ENST00000427635 COL4A4P53420 1690 aaPredicted RBP4.2□□□□□ -1.74
HERC4-206ENST00000427635 C20orf197Q8N268 126 aa4.2□□□□□ -1.74
HERC4-206ENST00000427635 PHF3Q92576 2039 aaKnown RBP4.2□□□□□ -1.74
HERC4-206ENST00000427635 TNRC6AQ8NDV7 1962 aaKnown RBP4.2□□□□□ -1.74
HERC4-206ENST00000427635 C10orf99Q6UWK7 81 aa4.2□□□□□ -1.74
HERC4-206ENST00000427635 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
HERC4-206ENST00000427635 HIGD1BQ9P298 99 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 MTORP42345 2549 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 DOPEY1Q5JWR5 2465 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 ENHOQ6UWT2 76 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.19□□□□□ -1.74
HERC4-206ENST00000427635 LCA10Q71F78 164 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 WFDC2Q14508 124 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 Q6ZTC4 211 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 A6NED7 52 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
HERC4-206ENST00000427635 FAM167A-AS1Q96KT0 104 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 WWC2-AS2Q96NR7 200 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 Q9BRP9 147 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 SDK2Q58EX2 2172 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 EGFEM1PQ0D2K5 195 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 EBI3Q14213 229 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 FAM30AQ9NZY2 134 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 ANAPC1Q9H1A4 1944 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 SPINK1P00995 79 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 GDF5OSQ5U4N7 250 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 CDKN2A-AS1Q9UH64 79 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 IGLV4-3A0A075B6K6 122 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 POM121L12Q8N7R1 296 aa4.18□□□□□ -1.74
HERC4-206ENST00000427635 TRBV6-5A0A0K0K1A5 114 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 Q8IZM0 81 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 USF3Q68DE3 2245 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 DYSFO75923 2080 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 LINC00308Q8TCZ7 52 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 HIVEP3Q5T1R4 2406 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 NDUFC1O43677 76 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 COA6Q5JTJ3 125 aaKnown RBP4.17□□□□□ -1.74
HERC4-206ENST00000427635 SOSTDC1Q6X4U4 206 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 ZNF524Q96C55 264 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 PROK1P58294 105 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 ROS1P08922 2347 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 KIAA2026Q5HYC2 2103 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 LINC00173Q6ZV60 143 aa4.17□□□□□ -1.74
HERC4-206ENST00000427635 CYSRT1A8MQ03 144 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 M0QY20 66 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 NRACQ8N912 160 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 USP9XQ93008 2570 aaPredicted RBP4.16□□□□□ -1.74
HERC4-206ENST00000427635 TRBV7-6A0A0J9YX20 115 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 PRR4Q16378 134 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 OXTP01178 125 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 Q6ZQY7 126 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 TRBV27A0A0K0K1C4 114 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 C7orf65Q6ZTY9 151 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 IGLV1-40P01703 118 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 SDIM1Q6ZPB5 146 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 CELA1Q9UNI1 258 aa4.16□□□□□ -1.74
HERC4-206ENST00000427635 ZGRF1Q86YA3 2104 aa4.15□□□□□ -1.74
HERC4-206ENST00000427635 IGLV1-51P01701 117 aa4.15□□□□□ -1.75
HERC4-206ENST00000427635 LINC00574Q9H8X3 128 aa4.15□□□□□ -1.75
HERC4-206ENST00000427635 KRTAP10-9P60411 292 aa4.15□□□□□ -1.75
HERC4-206ENST00000427635 MSMPQ1L6U9 139 aa4.15□□□□□ -1.75
HERC4-206ENST00000427635 SPACA4Q8TDM5 124 aa4.15□□□□□ -1.75
HERC4-206ENST00000427635 TYMSOSQ8TAI1 123 aa4.15□□□□□ -1.75
HERC4-206ENST00000427635 CRYGAP11844 174 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 ZNF80P51504 273 aaPredicted RBP4.14□□□□□ -1.75
HERC4-206ENST00000427635 RPL37AP61513 92 aaKnown RBP4.14□□□□□ -1.75
HERC4-206ENST00000427635 ZNF22P17026 224 aaPredicted RBP4.14□□□□□ -1.75
HERC4-206ENST00000427635 ATP11AUNQ6ZP68 121 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 hDV103S1A0JD37 113 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 PRM2P04554 102 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 COX6A2Q02221 97 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 Q6ZRU5 148 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 DOCK9Q9BZ29 2069 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 GTF3C1Q12789 2109 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 NUPR1O60356 82 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 FXYD2P54710 66 aa4.14□□□□□ -1.75
HERC4-206ENST00000427635 WISP2O76076 250 aa4.13□□□□□ -1.75
HERC4-206ENST00000427635 Q5XG85 94 aa4.13□□□□□ -1.75
HERC4-206ENST00000427635 WNK1Q9H4A3 2382 aa4.13□□□□□ -1.75
HERC4-206ENST00000427635 Q8N2B8 174 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms