RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 XGP55808 180 aa10.57□□□□□ -0.72
CALD1-206ENST00000424922 TSPEAR-AS2P59090 65 aa10.57□□□□□ -0.72
CALD1-206ENST00000424922 DAD1P61803 113 aa10.57□□□□□ -0.72
CALD1-206ENST00000424922 MRPS36P82909 103 aaKnown RBP10.57□□□□□ -0.72
CALD1-206ENST00000424922 FOXI1Q12951 378 aa10.57□□□□□ -0.72
CALD1-206ENST00000424922 FHL2Q14192 279 aa10.57□□□□□ -0.72
CALD1-206ENST00000424922 DNHD1Q96M86 4753 aa10.57□□□□□ -0.72
CALD1-206ENST00000424922 A0A0J9YXV3 536 aa10.56□□□□□ -0.72
CALD1-206ENST00000424922 SRSF9Q13242 221 aaKnown RBP eCLIP10.56□□□□□ -0.724e-6■■■■□ 19.6
CALD1-206ENST00000424922 TIMM21Q9BVV7 248 aa10.56□□□□□ -0.72
CALD1-206ENST00000424922 UBE2D4Q9Y2X8 147 aa10.56□□□□□ -0.72
CALD1-206ENST00000424922 TRBV10-1A0A0K0K1A3 114 aa10.55□□□□□ -0.72
CALD1-206ENST00000424922 UBE2D1P51668 147 aa10.55□□□□□ -0.72
CALD1-206ENST00000424922 GAGE13Q4V321 117 aa10.55□□□□□ -0.72
CALD1-206ENST00000424922 TM2D3Q9BRN9 247 aa10.55□□□□□ -0.72
CALD1-206ENST00000424922 APOMO95445 188 aa10.55□□□□□ -0.72
CALD1-206ENST00000424922 NDUFV3P56181 108 aaKnown RBP10.55□□□□□ -0.72
CALD1-206ENST00000424922 TRBV6-4A0A1B0GX49 114 aa10.54□□□□□ -0.72
CALD1-206ENST00000424922 Q6Q795 121 aa10.54□□□□□ -0.72
CALD1-206ENST00000424922 SH2D6Q7Z4S9 175 aa10.54□□□□□ -0.72
CALD1-206ENST00000424922 TINCRA0A1B0GVN0 87 aa10.54□□□□□ -0.72
CALD1-206ENST00000424922 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
CALD1-206ENST00000424922 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
CALD1-206ENST00000424922 C11orf68Q9H3H3 251 aaKnown RBP10.54□□□□□ -0.72
CALD1-206ENST00000424922 A0A0J9YWU9 116 aa10.53□□□□□ -0.72
CALD1-206ENST00000424922 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.72
CALD1-206ENST00000424922 RPL36AP83881 106 aaKnown RBP10.52□□□□□ -0.72
CALD1-206ENST00000424922 RPL36ALQ969Q0 106 aaKnown RBP10.52□□□□□ -0.72
CALD1-206ENST00000424922 PRO0461Q9UI25 63 aa10.52□□□□□ -0.72
CALD1-206ENST00000424922 IGHV3-38A0A0C4DH36 116 aa10.52□□□□□ -0.73
CALD1-206ENST00000424922 H3BMG7 143 aa10.52□□□□□ -0.73
CALD1-206ENST00000424922 IGHV3-30P01768 117 aa10.52□□□□□ -0.73
CALD1-206ENST00000424922 ATP5G1P05496 136 aa10.52□□□□□ -0.73
CALD1-206ENST00000424922 IGHV3-30-5P0DP03 117 aa10.52□□□□□ -0.73
CALD1-206ENST00000424922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.51□□□□□ -0.73
CALD1-206ENST00000424922 IGKV2-29A2NJV5 120 aaPredicted RBP10.51□□□□□ -0.73
CALD1-206ENST00000424922 CEMP1Q6PRD7 247 aaPredicted RBP10.51□□□□□ -0.73
CALD1-206ENST00000424922 SPANXCQ9NY87 97 aa10.51□□□□□ -0.73
CALD1-206ENST00000424922 IFITM1P13164 125 aa10.5□□□□□ -0.73
CALD1-206ENST00000424922 HTN3P15516 51 aa10.5□□□□□ -0.73
CALD1-206ENST00000424922 DAZ4Q86SG3 579 aaKnown RBP10.5□□□□□ -0.73
CALD1-206ENST00000424922 DAZ3Q9NR90 486 aaKnown RBP10.5□□□□□ -0.73
CALD1-206ENST00000424922 PRO0255Q9UI72 69 aa10.5□□□□□ -0.73
CALD1-206ENST00000424922 COL7A1Q02388 2944 aa10.5□□□□□ -0.73
CALD1-206ENST00000424922 UBE2D3P61077 147 aa10.49□□□□□ -0.73
CALD1-206ENST00000424922 UBE2D2P62837 147 aa10.49□□□□□ -0.73
CALD1-206ENST00000424922 TTC32Q5I0X7 151 aa10.49□□□□□ -0.73
CALD1-206ENST00000424922 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
CALD1-206ENST00000424922 F5H768 121 aa10.49□□□□□ -0.73
CALD1-206ENST00000424922 IGHV3-30-3P0DP02 117 aa10.49□□□□□ -0.73
CALD1-206ENST00000424922 TIRAPP58753 221 aa10.49□□□□□ -0.73
CALD1-206ENST00000424922 OR13C6PQ8NH95 151 aa10.49□□□□□ -0.73
CALD1-206ENST00000424922 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
CALD1-206ENST00000424922 GAGE2EQ4V326 116 aa10.48□□□□□ -0.73
CALD1-206ENST00000424922 GAGE2DQ9UEU5 116 aa10.48□□□□□ -0.73
CALD1-206ENST00000424922 PAX4O43316 350 aa10.48□□□□□ -0.73
CALD1-206ENST00000424922 GYPEP15421 78 aa10.48□□□□□ -0.73
CALD1-206ENST00000424922 IGLV5-45A0A087WSX0 123 aa10.47□□□□□ -0.73
CALD1-206ENST00000424922 FAM19A3Q7Z5A8 133 aa10.47□□□□□ -0.73
CALD1-206ENST00000424922 C11orf45Q8TAV5 145 aa10.47□□□□□ -0.73
CALD1-206ENST00000424922 B9D2Q9BPU9 175 aa10.47□□□□□ -0.73
CALD1-206ENST00000424922 NANOS2P60321 138 aaKnown RBP10.46□□□□□ -0.73
CALD1-206ENST00000424922 RNASE13Q5GAN3 156 aaKnown RBP10.46□□□□□ -0.73
CALD1-206ENST00000424922 MEIG1Q5JSS6 88 aa10.46□□□□□ -0.73
CALD1-206ENST00000424922 Q6ZTC4 211 aa10.46□□□□□ -0.73
CALD1-206ENST00000424922 C10orf126Q8N4M7 172 aa10.46□□□□□ -0.73
CALD1-206ENST00000424922 PPDPFLQ8WWR9 84 aa10.46□□□□□ -0.73
CALD1-206ENST00000424922 VSIG2Q96IQ7 327 aa10.46□□□□□ -0.73
CALD1-206ENST00000424922 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.74
CALD1-206ENST00000424922 A0A0J9YXY3 114 aa10.46□□□□□ -0.74
CALD1-206ENST00000424922 DGAT2L7PQ6IED9 249 aa10.46□□□□□ -0.74
CALD1-206ENST00000424922 HUWE1Q7Z6Z7 4374 aaKnown RBP10.45□□□□□ -0.74
CALD1-206ENST00000424922 A0A1B0GX51 115 aa10.45□□□□□ -0.74
CALD1-206ENST00000424922 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
CALD1-206ENST00000424922 CFC1BP0CG36 223 aa10.45□□□□□ -0.74
CALD1-206ENST00000424922 CFC1P0CG37 223 aa10.45□□□□□ -0.74
CALD1-206ENST00000424922 LINC00694P0DN24 101 aa10.45□□□□□ -0.74
CALD1-206ENST00000424922 J3KT08 172 aa10.44□□□□□ -0.74
CALD1-206ENST00000424922 NTM-AS1Q6ZSK4 140 aa10.44□□□□□ -0.74
CALD1-206ENST00000424922 STAB2Q8WWQ8 2551 aa10.44□□□□□ -0.74
CALD1-206ENST00000424922 MEGF8Q7Z7M0 2845 aa10.44□□□□□ -0.74
CALD1-206ENST00000424922 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
CALD1-206ENST00000424922 A0A0B4J2C4 111 aa10.43□□□□□ -0.74
CALD1-206ENST00000424922 HERVK_113P63121 156 aa10.43□□□□□ -0.74
CALD1-206ENST00000424922 PRO1854Q9UHT4 67 aa10.43□□□□□ -0.74
CALD1-206ENST00000424922 NDUFA12Q9UI09 145 aa10.43□□□□□ -0.74
CALD1-206ENST00000424922 A0A096LPF7 62 aa10.42□□□□□ -0.74
CALD1-206ENST00000424922 H7C423 109 aa10.42□□□□□ -0.74
CALD1-206ENST00000424922 LITAFQ99732 161 aa10.42□□□□□ -0.74
CALD1-206ENST00000424922 SPANXDQ9BXN6 97 aa10.42□□□□□ -0.74
CALD1-206ENST00000424922 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.42□□□□□ -0.74
CALD1-206ENST00000424922 TIMM17BO60830 172 aa10.42□□□□□ -0.74
CALD1-206ENST00000424922 SNCGO76070 127 aa10.42□□□□□ -0.74
CALD1-206ENST00000424922 RPS28P62857 69 aaKnown RBP10.41□□□□□ -0.74
CALD1-206ENST00000424922 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
CALD1-206ENST00000424922 CDKN2A-AS1Q9UH64 79 aa10.41□□□□□ -0.74
CALD1-206ENST00000424922 TMEM243Q9BU79 118 aa10.4□□□□□ -0.74
CALD1-206ENST00000424922 DNAH9Q9NYC9 4486 aa10.4□□□□□ -0.74
CALD1-206ENST00000424922 LINC00242Q5T6M2 205 aa10.4□□□□□ -0.74
CALD1-206ENST00000424922 CDC42SE2Q9NRR3 84 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms