RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 H3BT86 120 aa13.03□□□□□ -0.32
PPFIA3-202ENST00000421230 PRSS2P07478 247 aa13.03□□□□□ -0.32
PPFIA3-202ENST00000421230 GIG44P09565 113 aaPredicted RBP13.03□□□□□ -0.32
PPFIA3-202ENST00000421230 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
PPFIA3-202ENST00000421230 INSP01308 110 aa13.03□□□□□ -0.32
PPFIA3-202ENST00000421230 KRTAP10-11P60412 298 aa13.03□□□□□ -0.32
PPFIA3-202ENST00000421230 MIAQ16674 131 aa13.03□□□□□ -0.32
PPFIA3-202ENST00000421230 NDUFA12Q9UI09 145 aa13.03□□□□□ -0.32
PPFIA3-202ENST00000421230 GAGE12JA6NER3 117 aa13.02□□□□□ -0.33
PPFIA3-202ENST00000421230 GAGE7O76087 117 aa13.02□□□□□ -0.33
PPFIA3-202ENST00000421230 GAGE12FP0CL80 117 aa13.02□□□□□ -0.33
PPFIA3-202ENST00000421230 GAGE12GP0CL81 117 aa13.02□□□□□ -0.33
PPFIA3-202ENST00000421230 GAGE12IP0CL82 117 aa13.02□□□□□ -0.33
PPFIA3-202ENST00000421230 GAGE4Q13068 117 aa13.02□□□□□ -0.33
PPFIA3-202ENST00000421230 MRPL23Q16540 153 aaKnown RBP13.01□□□□□ -0.33
PPFIA3-202ENST00000421230 IGHV3OR16-12A0A075B7B8 117 aa13.01□□□□□ -0.33
PPFIA3-202ENST00000421230 DEFB121Q5J5C9 76 aa13.01□□□□□ -0.33
PPFIA3-202ENST00000421230 VSIG2Q96IQ7 327 aa13.01□□□□□ -0.33
PPFIA3-202ENST00000421230 LINC01587Q99440 93 aa13.01□□□□□ -0.33
PPFIA3-202ENST00000421230 COX6CP09669 75 aa13□□□□□ -0.33
PPFIA3-202ENST00000421230 C1orf158Q8N1D5 194 aa13□□□□□ -0.33
PPFIA3-202ENST00000421230 TRGV11A0A075B6L2 103 aa13□□□□□ -0.33
PPFIA3-202ENST00000421230 TINCRA0A1B0GVN0 87 aa13□□□□□ -0.33
PPFIA3-202ENST00000421230 CCDC179H3BU77 68 aa13□□□□□ -0.33
PPFIA3-202ENST00000421230 FAM240AA0A1B0GVK7 77 aa12.98□□□□□ -0.33
PPFIA3-202ENST00000421230 LST1O00453 97 aa12.98□□□□□ -0.33
PPFIA3-202ENST00000421230 CEMP1Q6PRD7 247 aaPredicted RBP12.98□□□□□ -0.33
PPFIA3-202ENST00000421230 NOTCH1P46531 2555 aa12.98□□□□□ -0.33
PPFIA3-202ENST00000421230 NBEAL2Q6ZNJ1 2754 aa12.98□□□□□ -0.33
PPFIA3-202ENST00000421230 TIMM17BO60830 172 aa12.97□□□□□ -0.33
PPFIA3-202ENST00000421230 EGFEM1PQ0D2K5 195 aa12.97□□□□□ -0.33
PPFIA3-202ENST00000421230 CLEC2BQ92478 149 aa12.97□□□□□ -0.33
PPFIA3-202ENST00000421230 A8MZ25 164 aa12.96□□□□□ -0.34
PPFIA3-202ENST00000421230 RNASE13Q5GAN3 156 aaKnown RBP12.96□□□□□ -0.34
PPFIA3-202ENST00000421230 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.34
PPFIA3-202ENST00000421230 CHCHD7Q9BUK0 85 aa12.96□□□□□ -0.34
PPFIA3-202ENST00000421230 SPANXA1Q9NS26 97 aa12.96□□□□□ -0.34
PPFIA3-202ENST00000421230 NBEAL1Q6ZS30 2694 aa12.95□□□□□ -0.34
PPFIA3-202ENST00000421230 UBE2D4Q9Y2X8 147 aa12.95□□□□□ -0.34
PPFIA3-202ENST00000421230 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
PPFIA3-202ENST00000421230 DNAH3Q8TD57 4116 aa12.94□□□□□ -0.34
PPFIA3-202ENST00000421230 IGHV4-30-4P0DP06 118 aa12.94□□□□□ -0.34
PPFIA3-202ENST00000421230 SMIM20Q8N5G0 67 aa12.94□□□□□ -0.34
PPFIA3-202ENST00000421230 NPC2P61916 151 aa12.93□□□□□ -0.34
PPFIA3-202ENST00000421230 MGAM2Q2M2H8 2515 aa12.93□□□□□ -0.34
PPFIA3-202ENST00000421230 LINC00467Q9BRT7 94 aa12.92□□□□□ -0.34
PPFIA3-202ENST00000421230 Q9UF83 564 aa12.92□□□□□ -0.34
PPFIA3-202ENST00000421230 TRBV7-7A0A0K0K1E9 115 aa12.9□□□□□ -0.34
PPFIA3-202ENST00000421230 PIK3CD-AS1Q5SR53 167 aa12.9□□□□□ -0.34
PPFIA3-202ENST00000421230 Q6ZSN1 163 aa12.9□□□□□ -0.34
PPFIA3-202ENST00000421230 C11orf72Q8NBR9 251 aa12.9□□□□□ -0.34
PPFIA3-202ENST00000421230 NDUFA1O15239 70 aa12.9□□□□□ -0.34
PPFIA3-202ENST00000421230 IGLV5-45A0A087WSX0 123 aa12.89□□□□□ -0.35
PPFIA3-202ENST00000421230 TIRAPP58753 221 aa12.89□□□□□ -0.35
PPFIA3-202ENST00000421230 ZNF415Q09FC8 603 aa12.89□□□□□ -0.35
PPFIA3-202ENST00000421230 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.89□□□□□ -0.35
PPFIA3-202ENST00000421230 IGKV2-29A2NJV5 120 aaPredicted RBP12.89□□□□□ -0.35
PPFIA3-202ENST00000421230 PRB2P02812 416 aaPredicted RBP12.88□□□□□ -0.35
PPFIA3-202ENST00000421230 APOC4P55056 127 aa12.88□□□□□ -0.35
PPFIA3-202ENST00000421230 CDKN2A-AS1Q9UH64 79 aa12.88□□□□□ -0.35
PPFIA3-202ENST00000421230 DEFB135Q30KP9 77 aa12.88□□□□□ -0.35
PPFIA3-202ENST00000421230 C5orf47Q569G3 176 aa12.88□□□□□ -0.35
PPFIA3-202ENST00000421230 KIR2DL5BQ8NHK3 375 aa12.88□□□□□ -0.35
PPFIA3-202ENST00000421230 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
PPFIA3-202ENST00000421230 DNHD1Q96M86 4753 aa12.87□□□□□ -0.35
PPFIA3-202ENST00000421230 DAND5Q8N907 189 aa12.87□□□□□ -0.35
PPFIA3-202ENST00000421230 LINC00308Q8TCZ7 52 aa12.85□□□□□ -0.35
PPFIA3-202ENST00000421230 DNAJC30Q96LL9 226 aa12.85□□□□□ -0.35
PPFIA3-202ENST00000421230 ACYP1P07311 99 aa12.85□□□□□ -0.35
PPFIA3-202ENST00000421230 CIRBPQ14011 172 aaKnown RBP12.84□□□□□ -0.35
PPFIA3-202ENST00000421230 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
PPFIA3-202ENST00000421230 PLAC8L1A1L4L8 177 aa12.83□□□□□ -0.36
PPFIA3-202ENST00000421230 COX7A2LO14548 114 aa12.83□□□□□ -0.36
PPFIA3-202ENST00000421230 IGHV3-53P01767 116 aa12.83□□□□□ -0.36
PPFIA3-202ENST00000421230 MEIG1Q5JSS6 88 aa12.83□□□□□ -0.36
PPFIA3-202ENST00000421230 IL17DQ8TAD2 202 aa12.83□□□□□ -0.36
PPFIA3-202ENST00000421230 X6R8D5 127 aa12.83□□□□□ -0.36
PPFIA3-202ENST00000421230 COX6A2Q02221 97 aa12.82□□□□□ -0.36
PPFIA3-202ENST00000421230 C16orf74Q96GX8 76 aa12.82□□□□□ -0.36
PPFIA3-202ENST00000421230 CHCHD5Q9BSY4 110 aa12.82□□□□□ -0.36
PPFIA3-202ENST00000421230 IMUPQ9GZP8 106 aa12.82□□□□□ -0.36
PPFIA3-202ENST00000421230 NOP10Q9NPE3 64 aaKnown RBP12.82□□□□□ -0.36
PPFIA3-202ENST00000421230 IGHV3-38A0A0C4DH36 116 aa12.81□□□□□ -0.36
PPFIA3-202ENST00000421230 TRGV1A0A0A0MS02 117 aa12.81□□□□□ -0.36
PPFIA3-202ENST00000421230 Q9H8V8 135 aa12.81□□□□□ -0.36
PPFIA3-202ENST00000421230 NACAE9PAV3 2078 aa12.81□□□□□ -0.36
PPFIA3-202ENST00000421230 Q6ZTI0 123 aa12.8□□□□□ -0.36
PPFIA3-202ENST00000421230 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
PPFIA3-202ENST00000421230 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
PPFIA3-202ENST00000421230 FAM19A3Q7Z5A8 133 aa12.79□□□□□ -0.36
PPFIA3-202ENST00000421230 HERVK_113P63121 156 aa12.78□□□□□ -0.36
PPFIA3-202ENST00000421230 DEFB4AO15263 64 aa12.78□□□□□ -0.36
PPFIA3-202ENST00000421230 RS1O15537 224 aa12.78□□□□□ -0.36
PPFIA3-202ENST00000421230 DAZ2Q13117 558 aaKnown RBP12.78□□□□□ -0.36
PPFIA3-202ENST00000421230 SDIM1Q6ZPB5 146 aa12.78□□□□□ -0.36
PPFIA3-202ENST00000421230 COPS9Q8WXC6 57 aa12.78□□□□□ -0.36
PPFIA3-202ENST00000421230 TRACP01848 142 aa12.77□□□□□ -0.36
PPFIA3-202ENST00000421230 KPRPQ5T749 579 aaPredicted RBP12.77□□□□□ -0.36
PPFIA3-202ENST00000421230 K7EIL1 84 aa12.77□□□□□ -0.37
PPFIA3-202ENST00000421230 DGAT2L7PQ6IED9 249 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms