RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 TMEM141Q96I45 108 aa6.14□□□□□ -1.43
CTSA-205ENST00000419493 NXT2Q9NPJ8 142 aaKnown RBP6.14□□□□□ -1.43
CTSA-205ENST00000419493 RPS10P5Q9NQ39 176 aa6.14□□□□□ -1.43
CTSA-205ENST00000419493 LINC00474Q9P2X8 69 aa6.14□□□□□ -1.43
CTSA-205ENST00000419493 PYGO1Q9Y3Y4 419 aa6.14□□□□□ -1.43
CTSA-205ENST00000419493 ABCA13Q86UQ4 5058 aa6.14□□□□□ -1.43
CTSA-205ENST00000419493 IGLV4-3A0A075B6K6 122 aa6.13□□□□□ -1.43
CTSA-205ENST00000419493 TRAV9-1A0A075B6T8 112 aa6.13□□□□□ -1.43
CTSA-205ENST00000419493 TGIF2-C20orf24A0A0A6YYL0 155 aa6.13□□□□□ -1.43
CTSA-205ENST00000419493 SPAG11BQ08648 103 aa6.13□□□□□ -1.43
CTSA-205ENST00000419493 GAGE2BQ13066 116 aa6.13□□□□□ -1.43
CTSA-205ENST00000419493 Q6ZRU5 148 aa6.13□□□□□ -1.43
CTSA-205ENST00000419493 ORAOV1Q8WV07 137 aa6.13□□□□□ -1.43
CTSA-205ENST00000419493 FAM104AQ969W3 186 aa6.13□□□□□ -1.43
CTSA-205ENST00000419493 IGHV3OR16-9A0A0B4J2B5 98 aa6.12□□□□□ -1.43
CTSA-205ENST00000419493 LOC107984640A0A0U1RRK4 108 aa6.12□□□□□ -1.43
CTSA-205ENST00000419493 G0S2P27469 103 aa6.12□□□□□ -1.43
CTSA-205ENST00000419493 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
CTSA-205ENST00000419493 FLG2Q5D862 2391 aaPredicted RBP6.12□□□□□ -1.43
CTSA-205ENST00000419493 OR10D4PQ8NGN7 298 aa6.12□□□□□ -1.43
CTSA-205ENST00000419493 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
CTSA-205ENST00000419493 C2orf88Q9BSF0 95 aa6.12□□□□□ -1.43
CTSA-205ENST00000419493 VCX2Q9H322 139 aa6.12□□□□□ -1.43
CTSA-205ENST00000419493 PLAC8Q9NZF1 115 aa6.12□□□□□ -1.43
CTSA-205ENST00000419493 K7EMI3 77 aa6.11□□□□□ -1.43
CTSA-205ENST00000419493 RPL18AQ02543 176 aaKnown RBP6.11□□□□□ -1.43
CTSA-205ENST00000419493 GNB1LQ9BYB4 327 aa6.11□□□□□ -1.43
CTSA-205ENST00000419493 A0A0J9YXV3 536 aa6.1□□□□□ -1.43
CTSA-205ENST00000419493 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
CTSA-205ENST00000419493 NDUFA1O15239 70 aa6.1□□□□□ -1.43
CTSA-205ENST00000419493 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
CTSA-205ENST00000419493 RHEBQ15382 184 aa6.1□□□□□ -1.43
CTSA-205ENST00000419493 COX19Q49B96 90 aa6.1□□□□□ -1.43
CTSA-205ENST00000419493 LINC00242Q5T6M2 205 aa6.1□□□□□ -1.43
CTSA-205ENST00000419493 ZC2HC1BQ5TFG8 222 aa6.1□□□□□ -1.43
CTSA-205ENST00000419493 APOC3P02656 99 aa6.09□□□□□ -1.43
CTSA-205ENST00000419493 UBE2D1P51668 147 aa6.09□□□□□ -1.43
CTSA-205ENST00000419493 HNRNPA3P51991 378 aaKnown RBP6.09□□□□□ -1.43
CTSA-205ENST00000419493 FABP9Q0Z7S8 132 aa6.09□□□□□ -1.43
CTSA-205ENST00000419493 PAPPA-AS1Q5QFB9 102 aa6.09□□□□□ -1.43
CTSA-205ENST00000419493 CARHSP1Q9Y2V2 147 aaKnown RBP6.09□□□□□ -1.43
CTSA-205ENST00000419493 A0A087WZ39 114 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 F8WDY8 70 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 OXTP01178 125 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 MT-ND6P03923 174 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 NDUFA5Q16718 116 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 C10orf91Q5T1B1 145 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 TOMM6Q96B49 74 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 SCGB3A1Q96QR1 104 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 ALKBH7Q9BT30 221 aaPredicted RBP6.08□□□□□ -1.44
CTSA-205ENST00000419493 MRPL18Q9H0U6 180 aaKnown RBP6.08□□□□□ -1.44
CTSA-205ENST00000419493 SMCO4Q9NRQ5 59 aa6.08□□□□□ -1.44
CTSA-205ENST00000419493 IGIPA6NJ69 53 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.07□□□□□ -1.44
CTSA-205ENST00000419493 PRSS2P07478 247 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 NPSP0C0P6 89 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 RNF151Q2KHN1 245 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 LINC00173Q6ZV60 143 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 FA2HQ7L5A8 372 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 AMELXQ99217 191 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 GEMIN7Q9H840 131 aaKnown RBP6.07□□□□□ -1.44
CTSA-205ENST00000419493 MRPL35Q9NZE8 188 aaKnown RBP6.07□□□□□ -1.44
CTSA-205ENST00000419493 TOMM7Q9P0U1 55 aa6.07□□□□□ -1.44
CTSA-205ENST00000419493 SNAPINO95295 136 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 SEC11AP67812 179 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 GAGE2EQ4V326 116 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
CTSA-205ENST00000419493 C6orf226Q5I0X4 101 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 C10orf25Q5T742 122 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 ERASQ7Z444 233 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 PACRGQ96M98 296 aaPredicted RBP6.06□□□□□ -1.44
CTSA-205ENST00000419493 TIMM17AQ99595 171 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 GAGE2DQ9UEU5 116 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 TRAPPC1Q9Y5R8 145 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 FAT1Q14517 4588 aa6.06□□□□□ -1.44
CTSA-205ENST00000419493 A0A1W2PNN7 141 aa6.05□□□□□ -1.44
CTSA-205ENST00000419493 LINC01549A6NIU2 74 aa6.05□□□□□ -1.44
CTSA-205ENST00000419493 CKS1BP61024 79 aa6.05□□□□□ -1.44
CTSA-205ENST00000419493 HERVK_113P63121 156 aa6.05□□□□□ -1.44
CTSA-205ENST00000419493 C2orf82Q6UX34 121 aa6.05□□□□□ -1.44
CTSA-205ENST00000419493 SVBPQ8N300 66 aa6.05□□□□□ -1.44
CTSA-205ENST00000419493 C6orf48Q9UBA6 75 aa6.05□□□□□ -1.44
CTSA-205ENST00000419493 SRRM2Q9UQ35 2752 aaKnown RBP6.04□□□□□ -1.44
CTSA-205ENST00000419493 PRR3P79522 188 aaKnown RBP6.04□□□□□ -1.44
CTSA-205ENST00000419493 KIAA0087Q14695 138 aa6.04□□□□□ -1.44
CTSA-205ENST00000419493 Q6ZRP5 223 aa6.04□□□□□ -1.44
CTSA-205ENST00000419493 LINC01561Q8N1V8 128 aa6.04□□□□□ -1.44
CTSA-205ENST00000419493 CDKN2A-AS1Q9UH64 79 aa6.04□□□□□ -1.44
CTSA-205ENST00000419493 TRBV30A0A0K0K1B3 111 aa6.03□□□□□ -1.44
CTSA-205ENST00000419493 NDUFA6P56556 154 aa6.03□□□□□ -1.44
CTSA-205ENST00000419493 LINC00469Q8N7U9 141 aa6.03□□□□□ -1.44
CTSA-205ENST00000419493 LINC01546A6NGU7 62 aa6.02□□□□□ -1.45
CTSA-205ENST00000419493 ATP6V1G1O75348 118 aa6.02□□□□□ -1.45
CTSA-205ENST00000419493 TLX1NBP0CAT3 122 aa6.02□□□□□ -1.45
CTSA-205ENST00000419493 PHF5AQ7RTV0 110 aaKnown RBP6.02□□□□□ -1.45
CTSA-205ENST00000419493 FAM19A3Q7Z5A8 133 aa6.02□□□□□ -1.45
CTSA-205ENST00000419493 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
CTSA-205ENST00000419493 TINCRA0A1B0GVN0 87 aa6.01□□□□□ -1.45
CTSA-205ENST00000419493 FAM168BA1KXE4 195 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms