RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 VPS25Q9BRG1 176 aa11.6□□□□□ -0.55
CALD1-204ENST00000417172 SPINK8P0C7L1 97 aa11.6□□□□□ -0.55
CALD1-204ENST00000417172 BOD1L2Q8IYS8 172 aa11.6□□□□□ -0.55
CALD1-204ENST00000417172 ANGP03950 147 aaKnown RBP11.59□□□□□ -0.55
CALD1-204ENST00000417172 C2orf91Q6ZV80 131 aa11.59□□□□□ -0.55
CALD1-204ENST00000417172 LINC00269Q8N2A0 174 aa11.59□□□□□ -0.55
CALD1-204ENST00000417172 LYSTQ99698 3801 aa11.59□□□□□ -0.55
CALD1-204ENST00000417172 IGHV3-30P01768 117 aa11.58□□□□□ -0.55
CALD1-204ENST00000417172 IGHV3-33P01772 117 aa11.58□□□□□ -0.55
CALD1-204ENST00000417172 NHLRC4P0CG21 123 aaPredicted RBP11.58□□□□□ -0.55
CALD1-204ENST00000417172 IGHV3-30-3P0DP02 117 aa11.58□□□□□ -0.55
CALD1-204ENST00000417172 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.55
CALD1-204ENST00000417172 TIRAPP58753 221 aa11.58□□□□□ -0.56
CALD1-204ENST00000417172 HERVK_113P61574 105 aa11.58□□□□□ -0.56
CALD1-204ENST00000417172 FAM19A3Q7Z5A8 133 aa11.58□□□□□ -0.56
CALD1-204ENST00000417172 IGLV5-45A0A087WSX0 123 aa11.57□□□□□ -0.56
CALD1-204ENST00000417172 LINC00959A0A1B0GUT2 108 aa11.57□□□□□ -0.56
CALD1-204ENST00000417172 FBN3Q75N90 2809 aa11.57□□□□□ -0.56
CALD1-204ENST00000417172 HERVK_113P63121 156 aa11.56□□□□□ -0.56
CALD1-204ENST00000417172 K7ERU9 68 aa11.56□□□□□ -0.56
CALD1-204ENST00000417172 RNF151Q2KHN1 245 aa11.55□□□□□ -0.56
CALD1-204ENST00000417172 C15orf53Q8NAA6 179 aa11.55□□□□□ -0.56
CALD1-204ENST00000417172 KLK12Q9UKR0 248 aa11.55□□□□□ -0.56
CALD1-204ENST00000417172 COX11Q9Y6N1 276 aa11.55□□□□□ -0.56
CALD1-204ENST00000417172 DNAH7Q8WXX0 4024 aa11.55□□□□□ -0.56
CALD1-204ENST00000417172 IGLV10-54A0A075B6I4 117 aa11.54□□□□□ -0.56
CALD1-204ENST00000417172 REG3AQ06141 175 aa11.54□□□□□ -0.56
CALD1-204ENST00000417172 J3QQQ9 107 aa11.54□□□□□ -0.56
CALD1-204ENST00000417172 XCL1P47992 114 aa11.54□□□□□ -0.56
CALD1-204ENST00000417172 ZNF815PA8K554 130 aa11.53□□□□□ -0.56
CALD1-204ENST00000417172 LEPROTO15243 131 aa11.53□□□□□ -0.56
CALD1-204ENST00000417172 SEC11AP67812 179 aa11.53□□□□□ -0.56
CALD1-204ENST00000417172 LINC00588Q9Y4M8 146 aa11.53□□□□□ -0.56
CALD1-204ENST00000417172 DYNC2H1Q8NCM8 4307 aaKnown RBP11.53□□□□□ -0.56
CALD1-204ENST00000417172 MYMXA0A1B0GTQ4 84 aa11.52□□□□□ -0.56
CALD1-204ENST00000417172 BATFQ16520 125 aa11.52□□□□□ -0.56
CALD1-204ENST00000417172 PLEKHB2Q96CS7 222 aa11.52□□□□□ -0.56
CALD1-204ENST00000417172 IGHV1-58A0A0C4DH39 117 aa11.52□□□□□ -0.57
CALD1-204ENST00000417172 SMIM1B2RUZ4 78 aa11.52□□□□□ -0.57
CALD1-204ENST00000417172 OCIAD2Q56VL3 154 aa11.52□□□□□ -0.57
CALD1-204ENST00000417172 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
CALD1-204ENST00000417172 H3BRM9 83 aa11.51□□□□□ -0.57
CALD1-204ENST00000417172 C5orf38Q86SI9 138 aa11.51□□□□□ -0.57
CALD1-204ENST00000417172 MRPS16Q9Y3D3 137 aaKnown RBP11.51□□□□□ -0.57
CALD1-204ENST00000417172 LGALS3P17931 250 aaKnown RBP11.5□□□□□ -0.57
CALD1-204ENST00000417172 SS18Q15532 418 aa11.5□□□□□ -0.57
CALD1-204ENST00000417172 ENHOQ6UWT2 76 aa11.5□□□□□ -0.57
CALD1-204ENST00000417172 TENM2Q9NT68 2774 aa11.5□□□□□ -0.57
CALD1-204ENST00000417172 SCGB1A1P11684 91 aa11.49□□□□□ -0.57
CALD1-204ENST00000417172 HINT1P49773 126 aaPredicted RBP11.49□□□□□ -0.57
CALD1-204ENST00000417172 STARD9Q9P2P6 4700 aa11.49□□□□□ -0.57
CALD1-204ENST00000417172 CHCHD10Q8WYQ3 142 aaPredicted RBP11.48□□□□□ -0.57
CALD1-204ENST00000417172 PRR34Q9NV39 138 aa11.48□□□□□ -0.57
CALD1-204ENST00000417172 TGP01266 2768 aa11.48□□□□□ -0.57
CALD1-204ENST00000417172 IGLV5-39A0A0G2JS06 123 aa11.48□□□□□ -0.57
CALD1-204ENST00000417172 UBE2WQ96B02 151 aa11.48□□□□□ -0.57
CALD1-204ENST00000417172 CCL18P55774 89 aa11.47□□□□□ -0.57
CALD1-204ENST00000417172 C10orf126Q8N4M7 172 aa11.47□□□□□ -0.57
CALD1-204ENST00000417172 APLNQ9ULZ1 77 aa11.47□□□□□ -0.57
CALD1-204ENST00000417172 PLECQ15149 4684 aaKnown RBP11.46□□□□□ -0.57
CALD1-204ENST00000417172 SIVA1O15304 175 aa11.46□□□□□ -0.58
CALD1-204ENST00000417172 LINC01556Q5JQF7 62 aa11.46□□□□□ -0.58
CALD1-204ENST00000417172 SCGB1D4Q6XE38 83 aa11.46□□□□□ -0.58
CALD1-204ENST00000417172 A0A087WZ39 114 aa11.45□□□□□ -0.58
CALD1-204ENST00000417172 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
CALD1-204ENST00000417172 CRPP02741 224 aa11.44□□□□□ -0.58
CALD1-204ENST00000417172 ZFAND6Q6FIF0 208 aa11.44□□□□□ -0.58
CALD1-204ENST00000417172 TOMM7Q9P0U1 55 aa11.44□□□□□ -0.58
CALD1-204ENST00000417172 HIGD1BQ9P298 99 aa11.44□□□□□ -0.58
CALD1-204ENST00000417172 GAGE12HA6NDE8 117 aa11.43□□□□□ -0.58
CALD1-204ENST00000417172 DNAH10OSP0CZ25 163 aa11.43□□□□□ -0.58
CALD1-204ENST00000417172 FOXI1Q12951 378 aa11.43□□□□□ -0.58
CALD1-204ENST00000417172 CD164L2Q6UWJ8 174 aa11.43□□□□□ -0.58
CALD1-204ENST00000417172 BVES-AS1Q5T3Y7 98 aa11.43□□□□□ -0.58
CALD1-204ENST00000417172 A0A0J9YXY3 114 aa11.41□□□□□ -0.58
CALD1-204ENST00000417172 A0A1B0GV72 72 aa11.41□□□□□ -0.58
CALD1-204ENST00000417172 ZNF625Q96I27 306 aaPredicted RBP11.41□□□□□ -0.58
CALD1-204ENST00000417172 Q9H8V8 135 aa11.41□□□□□ -0.58
CALD1-204ENST00000417172 NUPR2A6NF83 97 aa11.41□□□□□ -0.58
CALD1-204ENST00000417172 HSD52Q0P140 79 aa11.41□□□□□ -0.58
CALD1-204ENST00000417172 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
CALD1-204ENST00000417172 DNAH1Q9P2D7 4330 aa11.4□□□□□ -0.58
CALD1-204ENST00000417172 COX7A2LO14548 114 aa11.4□□□□□ -0.58
CALD1-204ENST00000417172 NDUFA1O15239 70 aa11.39□□□□□ -0.59
CALD1-204ENST00000417172 VAMP3Q15836 100 aa11.39□□□□□ -0.59
CALD1-204ENST00000417172 HIST1H4GQ99525 98 aa11.39□□□□□ -0.59
CALD1-204ENST00000417172 UPK3BQ9BT76 320 aa11.39□□□□□ -0.59
CALD1-204ENST00000417172 Q9HAA7 133 aa11.39□□□□□ -0.59
CALD1-204ENST00000417172 GCSHP23434 173 aa11.39□□□□□ -0.59
CALD1-204ENST00000417172 KRTAP26-1Q6PEX3 210 aa11.39□□□□□ -0.59
CALD1-204ENST00000417172 MIAQ16674 131 aa11.38□□□□□ -0.59
CALD1-204ENST00000417172 FXYD2P54710 66 aa11.37□□□□□ -0.59
CALD1-204ENST00000417172 UBE2DNLQ8IWF7 75 aa11.37□□□□□ -0.59
CALD1-204ENST00000417172 KLK5Q9Y337 293 aaPredicted RBP11.37□□□□□ -0.59
CALD1-204ENST00000417172 MALP21145 153 aa11.37□□□□□ -0.59
CALD1-204ENST00000417172 ADAMTSL4-AS1Q5T5F5 129 aa11.37□□□□□ -0.59
CALD1-204ENST00000417172 LITAFQ99732 161 aa11.37□□□□□ -0.59
CALD1-204ENST00000417172 TRAV8-4A0A0B4J246 113 aa11.36□□□□□ -0.59
CALD1-204ENST00000417172 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
CALD1-204ENST00000417172 A0A0U1RRA0 63 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 344.3 ms