RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 M0QY20 66 aa9.61□□□□□ -0.87
HNF4A-204ENST00000415691 HIST1H4AP62805 103 aaKnown RBP9.61□□□□□ -0.87
HNF4A-204ENST00000415691 DAND5Q8N907 189 aa9.61□□□□□ -0.87
HNF4A-204ENST00000415691 SMCR5Q8TEV8 140 aa9.61□□□□□ -0.87
HNF4A-204ENST00000415691 OPRPNQ99935 248 aaPredicted RBP9.61□□□□□ -0.87
HNF4A-204ENST00000415691 NDUFA12Q9UI09 145 aa9.61□□□□□ -0.87
HNF4A-204ENST00000415691 TRAV8-3A0A0A6YYJ7 113 aa9.6□□□□□ -0.87
HNF4A-204ENST00000415691 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
HNF4A-204ENST00000415691 IGKV3-7A0A075B6H7 116 aa9.6□□□□□ -0.87
HNF4A-204ENST00000415691 ATOX1O00244 68 aa9.6□□□□□ -0.87
HNF4A-204ENST00000415691 C2orf48Q96LS8 159 aa9.6□□□□□ -0.87
HNF4A-204ENST00000415691 CMYA5Q8N3K9 4069 aa9.59□□□□□ -0.87
HNF4A-204ENST00000415691 GAGE2AQ6NT46 116 aa9.59□□□□□ -0.87
HNF4A-204ENST00000415691 JPT2Q9H910 190 aa9.59□□□□□ -0.87
HNF4A-204ENST00000415691 A0A087WWL8 130 aa9.59□□□□□ -0.87
HNF4A-204ENST00000415691 COX7A2LO14548 114 aa9.59□□□□□ -0.87
HNF4A-204ENST00000415691 FAM222AQ5U5X8 452 aa9.58□□□□□ -0.88
HNF4A-204ENST00000415691 VSIG2Q96IQ7 327 aa9.58□□□□□ -0.88
HNF4A-204ENST00000415691 C9orf85Q96MD7 179 aa9.58□□□□□ -0.88
HNF4A-204ENST00000415691 TRACP01848 142 aa9.57□□□□□ -0.88
HNF4A-204ENST00000415691 RPL11P62913 178 aaKnown RBP9.57□□□□□ -0.88
HNF4A-204ENST00000415691 MUC4Q99102 2169 aa9.57□□□□□ -0.88
HNF4A-204ENST00000415691 TINCRA0A1B0GVN0 87 aa9.56□□□□□ -0.88
HNF4A-204ENST00000415691 DEFB114Q30KQ6 69 aa9.56□□□□□ -0.88
HNF4A-204ENST00000415691 DEFB104AQ8WTQ1 72 aa9.56□□□□□ -0.88
HNF4A-204ENST00000415691 TRAV25A0A0B4J276 109 aa9.56□□□□□ -0.88
HNF4A-204ENST00000415691 INAFM2P0DMQ5 153 aa9.56□□□□□ -0.88
HNF4A-204ENST00000415691 EDA2RQ9HAV5 297 aa9.56□□□□□ -0.88
HNF4A-204ENST00000415691 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
HNF4A-204ENST00000415691 TMEM258P61165 79 aa9.55□□□□□ -0.88
HNF4A-204ENST00000415691 WFDC9Q8NEX5 89 aa9.55□□□□□ -0.88
HNF4A-204ENST00000415691 DYNLRB2Q8TF09 96 aa9.55□□□□□ -0.88
HNF4A-204ENST00000415691 BEAN1Q3B7T3 259 aa9.54□□□□□ -0.88
HNF4A-204ENST00000415691 COPS9Q8WXC6 57 aa9.54□□□□□ -0.88
HNF4A-204ENST00000415691 FAM104AQ969W3 186 aa9.54□□□□□ -0.88
HNF4A-204ENST00000415691 KLK5Q9Y337 293 aaPredicted RBP9.54□□□□□ -0.88
HNF4A-204ENST00000415691 IGHV3-16A0A0C4DH30 117 aa9.54□□□□□ -0.88
HNF4A-204ENST00000415691 DAZ2Q13117 558 aaKnown RBP9.54□□□□□ -0.88
HNF4A-204ENST00000415691 DAZ4Q86SG3 579 aaKnown RBP9.54□□□□□ -0.88
HNF4A-204ENST00000415691 DAZ3Q9NR90 486 aaKnown RBP9.54□□□□□ -0.88
HNF4A-204ENST00000415691 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
HNF4A-204ENST00000415691 F6UB75 175 aa9.53□□□□□ -0.88
HNF4A-204ENST00000415691 NDUFA1O15239 70 aa9.53□□□□□ -0.88
HNF4A-204ENST00000415691 IGLV1-51P01701 117 aa9.52□□□□□ -0.89
HNF4A-204ENST00000415691 DEFB1P60022 68 aa9.52□□□□□ -0.89
HNF4A-204ENST00000415691 CIRBPQ14011 172 aaKnown RBP9.52□□□□□ -0.89
HNF4A-204ENST00000415691 NOTCH3Q9UM47 2321 aa9.52□□□□□ -0.89
HNF4A-204ENST00000415691 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
HNF4A-204ENST00000415691 TIRAPP58753 221 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 ZNF415Q09FC8 603 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 OXLD1Q5BKU9 147 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 BAALC-AS2P0C853 105 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 NPC2P61916 151 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 C9orf66Q5T8R8 295 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 LINC00308Q8TCZ7 52 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 DPH3Q96FX2 82 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 C22orf24Q9Y442 160 aa9.5□□□□□ -0.89
HNF4A-204ENST00000415691 K7EQG2 157 aa9.49□□□□□ -0.89
HNF4A-204ENST00000415691 IGLV5-45A0A087WSX0 123 aa9.49□□□□□ -0.89
HNF4A-204ENST00000415691 hADV29S1A0JD25 119 aa9.49□□□□□ -0.89
HNF4A-204ENST00000415691 DNHD1Q96M86 4753 aa9.48□□□□□ -0.89
HNF4A-204ENST00000415691 SERP2Q8N6R1 65 aa9.48□□□□□ -0.89
HNF4A-204ENST00000415691 TRAV12-3A0A0B4J271 114 aa9.48□□□□□ -0.89
HNF4A-204ENST00000415691 KRTAP21-3Q3LHN1 58 aa9.48□□□□□ -0.89
HNF4A-204ENST00000415691 UPK3BQ9BT76 320 aa9.47□□□□□ -0.89
HNF4A-204ENST00000415691 SORL1Q92673 2214 aa9.47□□□□□ -0.89
HNF4A-204ENST00000415691 Q6JHZ5 121 aa9.47□□□□□ -0.89
HNF4A-204ENST00000415691 OVOL2Q9BRP0 275 aa9.46□□□□□ -0.9
HNF4A-204ENST00000415691 UBE2D4Q9Y2X8 147 aa9.45□□□□□ -0.9
HNF4A-204ENST00000415691 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
HNF4A-204ENST00000415691 A8MZ25 164 aa9.45□□□□□ -0.9
HNF4A-204ENST00000415691 IGLV5-39A0A0G2JS06 123 aa9.44□□□□□ -0.9
HNF4A-204ENST00000415691 DEFB131AP59861 70 aa9.44□□□□□ -0.9
HNF4A-204ENST00000415691 MALP21145 153 aa9.44□□□□□ -0.9
HNF4A-204ENST00000415691 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
HNF4A-204ENST00000415691 SNRPD3P62318 126 aaKnown RBP9.44□□□□□ -0.9
HNF4A-204ENST00000415691 ODF3L2Q3SX64 289 aa9.44□□□□□ -0.9
HNF4A-204ENST00000415691 WFDC10AQ9H1F0 79 aa9.44□□□□□ -0.9
HNF4A-204ENST00000415691 MAP6D1Q9H9H5 199 aa9.44□□□□□ -0.9
HNF4A-204ENST00000415691 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
HNF4A-204ENST00000415691 CYSTM1Q9H1C7 97 aa9.43□□□□□ -0.9
HNF4A-204ENST00000415691 KNCNA6PVL3 124 aa9.42□□□□□ -0.9
HNF4A-204ENST00000415691 DNAL4O96015 105 aa9.42□□□□□ -0.9
HNF4A-204ENST00000415691 NDUFC2-KCTD14E9PQ53 114 aa9.42□□□□□ -0.9
HNF4A-204ENST00000415691 OBSCN-AS1Q96MR7 158 aa9.42□□□□□ -0.9
HNF4A-204ENST00000415691 C19orf73Q9NVV2 129 aa9.42□□□□□ -0.9
HNF4A-204ENST00000415691 CDKN2A-AS1Q9UH64 79 aa9.42□□□□□ -0.9
HNF4A-204ENST00000415691 RPL28P46779 137 aaKnown RBP9.41□□□□□ -0.9
HNF4A-204ENST00000415691 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
HNF4A-204ENST00000415691 FAM218AQ96MZ4 157 aa9.41□□□□□ -0.9
HNF4A-204ENST00000415691 IGKV3-20P01619 116 aa9.4□□□□□ -0.9
HNF4A-204ENST00000415691 PIK3CD-AS1Q5SR53 167 aa9.4□□□□□ -0.9
HNF4A-204ENST00000415691 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
HNF4A-204ENST00000415691 FAM19A3Q7Z5A8 133 aa9.4□□□□□ -0.9
HNF4A-204ENST00000415691 Q9H8V8 135 aa9.4□□□□□ -0.9
HNF4A-204ENST00000415691 DNAH3Q8TD57 4116 aa9.4□□□□□ -0.9
HNF4A-204ENST00000415691 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.9
HNF4A-204ENST00000415691 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
HNF4A-204ENST00000415691 TRAV13-2A0A0B4J235 113 aa9.39□□□□□ -0.91
HNF4A-204ENST00000415691 Q5XG85 94 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms