RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TRAV8-6A0A0B4J262 113 aa11.44□□□□□ -0.58
SCAMP4-204ENST00000414057 SEC11AP67812 179 aa11.44□□□□□ -0.58
SCAMP4-204ENST00000414057 PCLOQ9Y6V0 5065 aa11.43□□□□□ -0.58
SCAMP4-204ENST00000414057 hDV102S1A0JD36 115 aa11.43□□□□□ -0.58
SCAMP4-204ENST00000414057 TMEM262E9PQX1 116 aa11.43□□□□□ -0.58
SCAMP4-204ENST00000414057 ZC2HC1BQ5TFG8 222 aa11.43□□□□□ -0.58
SCAMP4-204ENST00000414057 FAM19A3Q7Z5A8 133 aa11.43□□□□□ -0.58
SCAMP4-204ENST00000414057 TINCRA0A1B0GVN0 87 aa11.42□□□□□ -0.58
SCAMP4-204ENST00000414057 UBE2D1P51668 147 aa11.42□□□□□ -0.58
SCAMP4-204ENST00000414057 MAJINQ3KP22 176 aa11.42□□□□□ -0.58
SCAMP4-204ENST00000414057 CHAC1Q9BUX1 264 aa11.42□□□□□ -0.58
SCAMP4-204ENST00000414057 RYR1P21817 5038 aa11.42□□□□□ -0.58
SCAMP4-204ENST00000414057 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
SCAMP4-204ENST00000414057 RBX1P62877 108 aa11.41□□□□□ -0.58
SCAMP4-204ENST00000414057 Q6ZRN7 208 aaPredicted RBP11.41□□□□□ -0.58
SCAMP4-204ENST00000414057 C10orf126Q8N4M7 172 aa11.41□□□□□ -0.58
SCAMP4-204ENST00000414057 PGPEP1Q9NXJ5 209 aa11.41□□□□□ -0.58
SCAMP4-204ENST00000414057 LRP1BQ9NZR2 4599 aa11.4□□□□□ -0.58
SCAMP4-204ENST00000414057 DNAH10OSP0CZ25 163 aa11.4□□□□□ -0.58
SCAMP4-204ENST00000414057 MPV17L2Q567V2 206 aa11.4□□□□□ -0.58
SCAMP4-204ENST00000414057 RNASE13Q5GAN3 156 aaKnown RBP11.4□□□□□ -0.58
SCAMP4-204ENST00000414057 IGLV4-60A0A075B6I1 120 aa11.39□□□□□ -0.59
SCAMP4-204ENST00000414057 A0A0J9YXV3 536 aa11.39□□□□□ -0.59
SCAMP4-204ENST00000414057 CCL25O15444 150 aa11.39□□□□□ -0.59
SCAMP4-204ENST00000414057 KRTAP10-2P60368 255 aa11.39□□□□□ -0.59
SCAMP4-204ENST00000414057 HERVK_113P61574 105 aa11.39□□□□□ -0.59
SCAMP4-204ENST00000414057 WFDC10BQ8IUB3 73 aa11.39□□□□□ -0.59
SCAMP4-204ENST00000414057 MAPKAPK5-AS1Q8N8E1 139 aa11.39□□□□□ -0.59
SCAMP4-204ENST00000414057 HERVK_113P63121 156 aa11.38□□□□□ -0.59
SCAMP4-204ENST00000414057 STPG4Q8N801 248 aa11.38□□□□□ -0.59
SCAMP4-204ENST00000414057 TMEM170BQ5T4T1 132 aa11.38□□□□□ -0.59
SCAMP4-204ENST00000414057 PRO1933Q9H354 126 aa11.38□□□□□ -0.59
SCAMP4-204ENST00000414057 GEMIN7Q9H840 131 aaKnown RBP11.38□□□□□ -0.59
SCAMP4-204ENST00000414057 HSPG2P98160 4391 aa11.37□□□□□ -0.59
SCAMP4-204ENST00000414057 ANKRD39Q53RE8 183 aa11.37□□□□□ -0.59
SCAMP4-204ENST00000414057 UQCR10Q9UDW1 63 aa11.37□□□□□ -0.59
SCAMP4-204ENST00000414057 IGLV5-45A0A087WSX0 123 aa11.36□□□□□ -0.59
SCAMP4-204ENST00000414057 ZNF22P17026 224 aaPredicted RBP11.36□□□□□ -0.59
SCAMP4-204ENST00000414057 TRAV13-1A0A0B4J241 112 aa11.35□□□□□ -0.59
SCAMP4-204ENST00000414057 E9PLD3 99 aa11.35□□□□□ -0.59
SCAMP4-204ENST00000414057 H3BRM9 83 aa11.35□□□□□ -0.59
SCAMP4-204ENST00000414057 LINC00242Q5T6M2 205 aa11.35□□□□□ -0.59
SCAMP4-204ENST00000414057 MIEN1Q9BRT3 115 aa11.35□□□□□ -0.59
SCAMP4-204ENST00000414057 COX8AP10176 69 aa11.34□□□□□ -0.59
SCAMP4-204ENST00000414057 A0A087WTM6 91 aa11.33□□□□□ -0.6
SCAMP4-204ENST00000414057 TMEM223A0PJW6 202 aa11.33□□□□□ -0.6
SCAMP4-204ENST00000414057 ANGP03950 147 aaKnown RBP11.33□□□□□ -0.6
SCAMP4-204ENST00000414057 SS18Q15532 418 aa11.33□□□□□ -0.6
SCAMP4-204ENST00000414057 SLC25A34Q6PIV7 304 aa11.33□□□□□ -0.6
SCAMP4-204ENST00000414057 Q8N1X5 172 aa11.33□□□□□ -0.6
SCAMP4-204ENST00000414057 LINC00469Q8N7U9 141 aa11.33□□□□□ -0.6
SCAMP4-204ENST00000414057 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 DLEU1O43261 78 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 NMUP48645 174 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 C14orf144Q96I85 54 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 PSCAO43653 123 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 DDTP30046 118 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 REG3AQ06141 175 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 KRTAP4-5Q9BYR2 181 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 PRR34Q9NV39 138 aa11.32□□□□□ -0.6
SCAMP4-204ENST00000414057 DNAH5Q8TE73 4624 aa11.31□□□□□ -0.6
SCAMP4-204ENST00000414057 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
SCAMP4-204ENST00000414057 BOD1L2Q8IYS8 172 aa11.31□□□□□ -0.6
SCAMP4-204ENST00000414057 IGKV2D-26A0A0A0MRZ7 120 aa11.3□□□□□ -0.6
SCAMP4-204ENST00000414057 PLEKHB2Q96CS7 222 aa11.3□□□□□ -0.6
SCAMP4-204ENST00000414057 CDKN2A-AS1Q9UH64 79 aa11.3□□□□□ -0.6
SCAMP4-204ENST00000414057 IGKV3OR2-268A0A0C4DH90 116 aa11.29□□□□□ -0.6
SCAMP4-204ENST00000414057 IBA57-AS1B1ANH7 110 aa11.29□□□□□ -0.6
SCAMP4-204ENST00000414057 LEPROTO15243 131 aa11.29□□□□□ -0.6
SCAMP4-204ENST00000414057 APOBP04114 4563 aaKnown RBP11.29□□□□□ -0.6
SCAMP4-204ENST00000414057 IGHV1-58A0A0C4DH39 117 aa11.28□□□□□ -0.6
SCAMP4-204ENST00000414057 CRPP02741 224 aa11.28□□□□□ -0.6
SCAMP4-204ENST00000414057 COX6A2Q02221 97 aa11.28□□□□□ -0.6
SCAMP4-204ENST00000414057 TRAV8-4A0A0B4J246 113 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 IGHV3OR16-9A0A0B4J2B5 98 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 IGHV3-30P01768 117 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 IGHV3-33P01772 117 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 IGHV3-30-3P0DP02 117 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 LINC01561Q8N1V8 128 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 Q8N3U1 123 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 KLK12Q9UKR0 248 aa11.27□□□□□ -0.6
SCAMP4-204ENST00000414057 J3QQQ9 107 aa11.26□□□□□ -0.61
SCAMP4-204ENST00000414057 MIAQ16674 131 aa11.26□□□□□ -0.61
SCAMP4-204ENST00000414057 CD164L2Q6UWJ8 174 aa11.26□□□□□ -0.61
SCAMP4-204ENST00000414057 PCP2Q8IVA1 136 aa11.26□□□□□ -0.61
SCAMP4-204ENST00000414057 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
SCAMP4-204ENST00000414057 LGALS3P17931 250 aaKnown RBP11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 HNRNPA3P51991 378 aaKnown RBP11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 A0A087WZ39 114 aa11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 IGLV5-39A0A0G2JS06 123 aa11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 SPINK8P0C7L1 97 aa11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 CLPSL2Q6UWE3 100 aa11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 NTN5Q8WTR8 489 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 Q9HAA7 133 aa11.25□□□□□ -0.61
SCAMP4-204ENST00000414057 MYMXA0A1B0GTQ4 84 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms