RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 CITED1Q99966 193 aa11.98□□□□□ -0.49
TOM1-204ENST00000411850 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
TOM1-204ENST00000411850 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
TOM1-204ENST00000411850 PRIMA1Q86XR5 153 aa11.97□□□□□ -0.49
TOM1-204ENST00000411850 C16orf95Q9H693 158 aa11.97□□□□□ -0.49
TOM1-204ENST00000411850 TRAV8-4A0A0B4J246 113 aa11.97□□□□□ -0.49
TOM1-204ENST00000411850 TRBV6-4A0A1B0GX49 114 aa11.97□□□□□ -0.49
TOM1-204ENST00000411850 UBE2L6O14933 153 aa11.97□□□□□ -0.49
TOM1-204ENST00000411850 SOSTDC1Q6X4U4 206 aa11.97□□□□□ -0.49
TOM1-204ENST00000411850 LINC01006Q8NI28 216 aa11.97□□□□□ -0.49
TOM1-204ENST00000411850 OVOL2Q9BRP0 275 aa11.96□□□□□ -0.49
TOM1-204ENST00000411850 C19orf73Q9NVV2 129 aa11.96□□□□□ -0.49
TOM1-204ENST00000411850 IGLV1-51P01701 117 aa11.96□□□□□ -0.5
TOM1-204ENST00000411850 TRGV2A0A075B6R0 118 aa11.95□□□□□ -0.5
TOM1-204ENST00000411850 GAGE7O76087 117 aa11.95□□□□□ -0.5
TOM1-204ENST00000411850 GAGE12FP0CL80 117 aa11.95□□□□□ -0.5
TOM1-204ENST00000411850 GAGE12GP0CL81 117 aa11.95□□□□□ -0.5
TOM1-204ENST00000411850 GAGE12IP0CL82 117 aa11.95□□□□□ -0.5
TOM1-204ENST00000411850 DEFB121Q5J5C9 76 aa11.95□□□□□ -0.5
TOM1-204ENST00000411850 MEIG1Q5JSS6 88 aa11.95□□□□□ -0.5
TOM1-204ENST00000411850 CUBNO60494 3623 aa11.94□□□□□ -0.5
TOM1-204ENST00000411850 A0A0U1RRA0 63 aa11.94□□□□□ -0.5
TOM1-204ENST00000411850 SHISA2Q6UWI4 295 aa11.94□□□□□ -0.5
TOM1-204ENST00000411850 CSNK1G2-AS1Q8NCQ2 148 aa11.94□□□□□ -0.5
TOM1-204ENST00000411850 ACANP16112 2415 aa11.94□□□□□ -0.5
TOM1-204ENST00000411850 COX7A2LO14548 114 aa11.93□□□□□ -0.5
TOM1-204ENST00000411850 WFDC10AQ9H1F0 79 aa11.93□□□□□ -0.5
TOM1-204ENST00000411850 NF1P21359 2839 aa11.93□□□□□ -0.5
TOM1-204ENST00000411850 RPL35AP18077 110 aaKnown RBP11.93□□□□□ -0.5
TOM1-204ENST00000411850 LOC100131303A0A0U1RQF7 123 aa11.92□□□□□ -0.5
TOM1-204ENST00000411850 SNCGO76070 127 aa11.92□□□□□ -0.5
TOM1-204ENST00000411850 HILS1P60008 231 aa11.92□□□□□ -0.5
TOM1-204ENST00000411850 FASNP49327 2511 aaKnown RBP11.91□□□□□ -0.5
TOM1-204ENST00000411850 WNK1Q9H4A3 2382 aa11.91□□□□□ -0.5
TOM1-204ENST00000411850 SMR3AQ99954 134 aa11.91□□□□□ -0.5
TOM1-204ENST00000411850 TRGV4A0A0C4DH28 118 aa11.9□□□□□ -0.5
TOM1-204ENST00000411850 FAM240AA0A1B0GVK7 77 aa11.9□□□□□ -0.5
TOM1-204ENST00000411850 CRLF1O75462 422 aa11.89□□□□□ -0.51
TOM1-204ENST00000411850 GAGE2BQ13066 116 aa11.89□□□□□ -0.51
TOM1-204ENST00000411850 FHL2Q14192 279 aa11.89□□□□□ -0.51
TOM1-204ENST00000411850 MRPL23Q16540 153 aaKnown RBP11.89□□□□□ -0.51
TOM1-204ENST00000411850 GAGE2EQ4V326 116 aa11.89□□□□□ -0.51
TOM1-204ENST00000411850 Q6Q795 121 aa11.89□□□□□ -0.51
TOM1-204ENST00000411850 COX7B2Q8TF08 81 aa11.89□□□□□ -0.51
TOM1-204ENST00000411850 GAGE2DQ9UEU5 116 aa11.89□□□□□ -0.51
TOM1-204ENST00000411850 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
TOM1-204ENST00000411850 GAGE6Q13070 117 aa11.87□□□□□ -0.51
TOM1-204ENST00000411850 C15orf53Q8NAA6 179 aa11.87□□□□□ -0.51
TOM1-204ENST00000411850 SETXQ7Z333 2677 aaKnown RBP11.87□□□□□ -0.51
TOM1-204ENST00000411850 LY6G6DO95868 133 aa11.86□□□□□ -0.51
TOM1-204ENST00000411850 TRACP01848 142 aa11.86□□□□□ -0.51
TOM1-204ENST00000411850 PF4P02776 101 aa11.86□□□□□ -0.51
TOM1-204ENST00000411850 ANAPC13Q9BS18 74 aa11.86□□□□□ -0.51
TOM1-204ENST00000411850 HECTD1Q9ULT8 2610 aa11.86□□□□□ -0.51
TOM1-204ENST00000411850 IGLV4-60A0A075B6I1 120 aa11.85□□□□□ -0.51
TOM1-204ENST00000411850 TRAV26-1A0A087WT03 109 aa11.85□□□□□ -0.51
TOM1-204ENST00000411850 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
TOM1-204ENST00000411850 TRAV13-2A0A0B4J235 113 aa11.85□□□□□ -0.51
TOM1-204ENST00000411850 IGHV3OR16-9A0A0B4J2B5 98 aa11.85□□□□□ -0.51
TOM1-204ENST00000411850 MTORP42345 2549 aa11.84□□□□□ -0.51
TOM1-204ENST00000411850 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
TOM1-204ENST00000411850 CHCHD5Q9BSY4 110 aa11.83□□□□□ -0.52
TOM1-204ENST00000411850 OTOGQ6ZRI0 2925 aa11.83□□□□□ -0.52
TOM1-204ENST00000411850 RPL28P46779 137 aaKnown RBP11.82□□□□□ -0.52
TOM1-204ENST00000411850 A0A087WZ39 114 aa11.82□□□□□ -0.52
TOM1-204ENST00000411850 KIR2DL5BQ8NHK3 375 aa11.82□□□□□ -0.52
TOM1-204ENST00000411850 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
TOM1-204ENST00000411850 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
TOM1-204ENST00000411850 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
TOM1-204ENST00000411850 CRPP02741 224 aa11.81□□□□□ -0.52
TOM1-204ENST00000411850 NDUFV3P56181 108 aaKnown RBP11.81□□□□□ -0.52
TOM1-204ENST00000411850 NOTCH3Q9UM47 2321 aa11.81□□□□□ -0.52
TOM1-204ENST00000411850 ACYP1P07311 99 aa11.81□□□□□ -0.52
TOM1-204ENST00000411850 NHLRC4P0CG21 123 aaPredicted RBP11.81□□□□□ -0.52
TOM1-204ENST00000411850 LINC00612Q8N6U2 182 aa11.81□□□□□ -0.52
TOM1-204ENST00000411850 SND1-IT1Q9HBX3 110 aa11.81□□□□□ -0.52
TOM1-204ENST00000411850 HIVEP2P31629 2446 aa11.8□□□□□ -0.52
TOM1-204ENST00000411850 FAM218AQ96MZ4 157 aa11.8□□□□□ -0.52
TOM1-204ENST00000411850 IGKV2-28A0A075B6P5 120 aa11.79□□□□□ -0.52
TOM1-204ENST00000411850 IBA57-AS1B1ANH7 110 aa11.79□□□□□ -0.52
TOM1-204ENST00000411850 IGKV2D-28P01615 120 aa11.79□□□□□ -0.52
TOM1-204ENST00000411850 LINC00337Q8N6G1 96 aa11.79□□□□□ -0.52
TOM1-204ENST00000411850 BAALC-AS2P0C853 105 aa11.79□□□□□ -0.52
TOM1-204ENST00000411850 LINC00158P58513 81 aa11.79□□□□□ -0.52
TOM1-204ENST00000411850 TTC32Q5I0X7 151 aa11.79□□□□□ -0.52
TOM1-204ENST00000411850 JMJD1CQ15652 2540 aa11.79□□□□□ -0.52
TOM1-204ENST00000411850 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
TOM1-204ENST00000411850 C2CD3Q4AC94 2353 aa11.78□□□□□ -0.52
TOM1-204ENST00000411850 DEFB130BP0DP73 79 aa11.77□□□□□ -0.53
TOM1-204ENST00000411850 DEFB130AP0DP74 79 aa11.77□□□□□ -0.53
TOM1-204ENST00000411850 C22orf24Q9Y442 160 aa11.77□□□□□ -0.53
TOM1-204ENST00000411850 CCL18P55774 89 aa11.76□□□□□ -0.53
TOM1-204ENST00000411850 C5orf38Q86SI9 138 aa11.76□□□□□ -0.53
TOM1-204ENST00000411850 TRBV7-7A0A0K0K1E9 115 aa11.75□□□□□ -0.53
TOM1-204ENST00000411850 A0A1B0GUV1 79 aa11.75□□□□□ -0.53
TOM1-204ENST00000411850 INAFM1C9JVW0 142 aa11.75□□□□□ -0.53
TOM1-204ENST00000411850 GYPEP15421 78 aa11.74□□□□□ -0.53
TOM1-204ENST00000411850 KRTAP10-3P60369 221 aa11.74□□□□□ -0.53
TOM1-204ENST00000411850 SMIM11BQ8TCY0 68 aa11.74□□□□□ -0.53
TOM1-204ENST00000411850 SETD2Q9BYW2 2564 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms