RNA–Protein interactions for RNA: ENST00000411249.1

RNU6-1199P-201, Transcript of RNA, U6 small nuclear 1199, pseudogene, humanhuman

BASIC

Gene RNU6-1199P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1199P-201ENST00000411249 COX8AP10176 69 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 PIPP12273 146 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 RPS29P62273 56 aaKnown RBP-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 ALX1Q15699 326 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CLLU1Q5K131 121 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 Q6AWC8 147 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 WFDC9Q8NEX5 89 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 VSTM2AQ8TAG5 236 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 BOLA2Q9H3K6 86 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 PARVGQ9HBI0 331 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 APLNQ9ULZ1 77 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 HMGXB3Q12766 1538 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MYOM3Q5VTT5 1437 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 KIF21AQ7Z4S6 1674 aa-1.16□□□□□ -2.6
RNU6-1199P-201ENST00000411249 POLA1P09884 1462 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MAGI1Q96QZ7 1491 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 A0A087WVE0 104 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CTXND1A0A1B0GTU2 59 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 LINC00959A0A1B0GUT2 108 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 DPM2O94777 84 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 PPP1R17O96001 155 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 UBE2G1P62253 170 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CCL8P80075 99 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 TMEM170BQ5T4T1 132 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MNS1Q8NEH6 495 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 BANF2Q9H503 90 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 NAA60Q9H7X0 242 aa-1.17□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SHANK2Q9UPX8 1470 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 RAPGEF6Q8TEU7 1601 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 RIMS1Q86UR5 1692 aaKnown RBP-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 TRBV20-1A0A075B6N2 111 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SYS1-DBNDD2H3BUS1 97 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 PFDN1O60925 122 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SMIM24O75264 130 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 PPP1R2P3Q6NXS1 205 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CLPSL2Q6UWE3 100 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 OR9Q1Q8NGQ5 310 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SELENOSQ9BQE4 189 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 LENEPQ9Y5L5 61 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SETBP1Q9Y6X0 1596 aa-1.18□□□□□ -2.6
RNU6-1199P-201ENST00000411249 DNAH14Q0VDD8 3507 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 ARHGEF10O15013 1369 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 ROCK1Q13464 1354 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 TMEM2Q9UHN6 1383 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CPSF4LA6NMK7 179 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MT-ND4LP03901 98 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 PAEPP09466 180 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CBLN1P23435 193 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MRPS25P82663 173 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 RPL7L1Q6DKI1 246 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 TOMM20LQ6UXN7 152 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MAGOHBQ96A72 148 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 USMG5Q96IX5 58 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 HOPXQ9BPY8 73 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MRPL40Q9NQ50 206 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CALML5Q9NZT1 146 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 STOML2Q9UJZ1 356 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 NWD2Q9ULI1 1742 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 V9GYH0 126 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MYH3P11055 1940 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 IFT140Q96RY7 1462 aa-1.19□□□□□ -2.6
RNU6-1199P-201ENST00000411249 FRYLO94915 3013 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CDC42BPAQ5VT25 1732 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 PPIP5K1Q6PFW1 1433 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 A6NIN4 97 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 UQCR11O14957 56 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SIX6O95475 246 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SCTP09683 121 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 TPPP2P59282 170 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 UBE2D3P61077 147 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 UBE2D2P62837 147 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 RPS28P62857 69 aaKnown RBP-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 TMEM244Q5VVB8 128 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MIC13Q5XKP0 118 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 OR8I2Q8N0Y5 310 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SPTSSBQ8NFR3 76 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 ATPIF1Q9UII2 106 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 CICQ96RK0 1608 aaPredicted RBP-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 FYCO1Q9BQS8 1478 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 PATJQ8NI35 1801 aa-1.2□□□□□ -2.6
RNU6-1199P-201ENST00000411249 MYH7P12883 1935 aa-1.21□□□□□ -2.6
RNU6-1199P-201ENST00000411249 BAGE2Q86Y30 109 aa-1.21□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SAR1AQ9NR31 198 aa-1.21□□□□□ -2.6
RNU6-1199P-201ENST00000411249 NDUFA4L2Q9NRX3 87 aa-1.21□□□□□ -2.6
RNU6-1199P-201ENST00000411249 NKTRP30414 1462 aaKnown RBP-1.21□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SYNJ1O43426 1573 aa-1.21□□□□□ -2.6
RNU6-1199P-201ENST00000411249 DISP2A7MBM2 1401 aa-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 A0A1B0GX51 115 aa-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 F8VRH5 84 aa-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 ARPC5O15511 151 aa-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 E2F6O75461 281 aa-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 APOC3P02656 99 aa-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 SCIMPQ6UWF3 145 aa-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 TMEM263Q8WUH6 116 aaKnown RBP-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 LINC01558Q9Y6Z2 57 aa-1.22□□□□□ -2.6
RNU6-1199P-201ENST00000411249 TRAV36DV7A0A075B6V5 113 aa-1.23□□□□□ -2.61
RNU6-1199P-201ENST00000411249 LCE6AA0A183 80 aa-1.23□□□□□ -2.61
RNU6-1199P-201ENST00000411249 TMEM238C9JI98 176 aa-1.23□□□□□ -2.61
RNU6-1199P-201ENST00000411249 HCG22E2RYF7 251 aa-1.23□□□□□ -2.61
RNU6-1199P-201ENST00000411249 TNFSF15O95150 251 aa-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms