RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 USP17L23D6RBM5 183 aa13.62□□□□□ -0.23
C4orf48-202ENST00000409860 HERVK_113P63121 156 aa13.62□□□□□ -0.23
C4orf48-202ENST00000409860 C14orf177Q52M58 125 aa13.62□□□□□ -0.23
C4orf48-202ENST00000409860 CFAP161Q6P656 301 aa13.62□□□□□ -0.23
C4orf48-202ENST00000409860 GEMIN7Q9H840 131 aaKnown RBP13.62□□□□□ -0.23
C4orf48-202ENST00000409860 A0A0J9YXV3 536 aa13.61□□□□□ -0.23
C4orf48-202ENST00000409860 MALP21145 153 aa13.61□□□□□ -0.23
C4orf48-202ENST00000409860 WFDC2Q14508 124 aa13.61□□□□□ -0.23
C4orf48-202ENST00000409860 TRAV12-1A0A0B4J245 112 aa13.6□□□□□ -0.23
C4orf48-202ENST00000409860 IGHV3OR16-9A0A0B4J2B5 98 aa13.6□□□□□ -0.23
C4orf48-202ENST00000409860 TINCRA0A1B0GVN0 87 aa13.6□□□□□ -0.23
C4orf48-202ENST00000409860 C5orf38Q86SI9 138 aa13.6□□□□□ -0.23
C4orf48-202ENST00000409860 COX6A2Q02221 97 aa13.59□□□□□ -0.23
C4orf48-202ENST00000409860 MAP1LC3CQ9BXW4 147 aa13.59□□□□□ -0.23
C4orf48-202ENST00000409860 IGHV1-58A0A0C4DH39 117 aa13.58□□□□□ -0.24
C4orf48-202ENST00000409860 H0Y8G0 127 aa13.58□□□□□ -0.24
C4orf48-202ENST00000409860 Q8N814 137 aa13.58□□□□□ -0.24
C4orf48-202ENST00000409860 CHTOPQ9Y3Y2 248 aaKnown RBP13.58□□□□□ -0.24
C4orf48-202ENST00000409860 APOMO95445 188 aa13.57□□□□□ -0.24
C4orf48-202ENST00000409860 IGLC3P0DOY3 106 aa13.57□□□□□ -0.24
C4orf48-202ENST00000409860 S100A2P29034 98 aa13.57□□□□□ -0.24
C4orf48-202ENST00000409860 LINC00469Q8N7U9 141 aa13.57□□□□□ -0.24
C4orf48-202ENST00000409860 FAT2Q9NYQ8 4349 aa13.57□□□□□ -0.24
C4orf48-202ENST00000409860 A0A087WZ39 114 aa13.56□□□□□ -0.24
C4orf48-202ENST00000409860 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
C4orf48-202ENST00000409860 CHAC1Q9BUX1 264 aa13.56□□□□□ -0.24
C4orf48-202ENST00000409860 IGLV4-69A0A075B6H9 119 aa13.55□□□□□ -0.24
C4orf48-202ENST00000409860 LINC01561Q8N1V8 128 aa13.55□□□□□ -0.24
C4orf48-202ENST00000409860 HIST3H2BBQ8N257 126 aa13.55□□□□□ -0.24
C4orf48-202ENST00000409860 IGLV5-45A0A087WSX0 123 aa13.54□□□□□ -0.24
C4orf48-202ENST00000409860 hDV102S1A0JD36 115 aa13.54□□□□□ -0.24
C4orf48-202ENST00000409860 F8VRH5 84 aa13.54□□□□□ -0.24
C4orf48-202ENST00000409860 CDKN2A-AS1Q9UH64 79 aa13.54□□□□□ -0.24
C4orf48-202ENST00000409860 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
C4orf48-202ENST00000409860 A0A1B0GVY2 172 aa13.53□□□□□ -0.24
C4orf48-202ENST00000409860 SNRPEP62304 92 aaKnown RBP13.53□□□□□ -0.24
C4orf48-202ENST00000409860 ODF1Q14990 250 aa13.53□□□□□ -0.24
C4orf48-202ENST00000409860 HIGD2BQ4VC39 106 aa13.53□□□□□ -0.24
C4orf48-202ENST00000409860 NTN5Q8WTR8 489 aaPredicted RBP13.53□□□□□ -0.24
C4orf48-202ENST00000409860 MRPL35Q9NZE8 188 aaKnown RBP13.53□□□□□ -0.24
C4orf48-202ENST00000409860 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.52□□□□□ -0.25
C4orf48-202ENST00000409860 H3BRM9 83 aa13.52□□□□□ -0.25
C4orf48-202ENST00000409860 SPATA12Q7Z6I5 190 aa13.52□□□□□ -0.25
C4orf48-202ENST00000409860 IGHV3-64A0A075B6Q5 118 aa13.51□□□□□ -0.25
C4orf48-202ENST00000409860 C11orf86A6NJI1 115 aa13.51□□□□□ -0.25
C4orf48-202ENST00000409860 SYS1-DBNDD2H3BUS1 97 aa13.51□□□□□ -0.25
C4orf48-202ENST00000409860 OR10D4PQ8NGN7 298 aa13.51□□□□□ -0.25
C4orf48-202ENST00000409860 ORAOV1Q8WV07 137 aa13.51□□□□□ -0.25
C4orf48-202ENST00000409860 C5orf52A6NGY3 159 aa13.5□□□□□ -0.25
C4orf48-202ENST00000409860 ZNF561-AS1K7EIQ3 104 aa13.5□□□□□ -0.25
C4orf48-202ENST00000409860 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
C4orf48-202ENST00000409860 HIST1H2BLQ99880 126 aa13.5□□□□□ -0.25
C4orf48-202ENST00000409860 KRTAP10-2P60368 255 aa13.49□□□□□ -0.25
C4orf48-202ENST00000409860 KRTDAPP60985 99 aa13.49□□□□□ -0.25
C4orf48-202ENST00000409860 SPAG11BQ08648 103 aa13.49□□□□□ -0.25
C4orf48-202ENST00000409860 TMEM170BQ5T4T1 132 aa13.49□□□□□ -0.25
C4orf48-202ENST00000409860 CDPF1Q6NVV7 123 aa13.49□□□□□ -0.25
C4orf48-202ENST00000409860 PET117Q6UWS5 81 aa13.49□□□□□ -0.25
C4orf48-202ENST00000409860 PGPEP1Q9NXJ5 209 aa13.49□□□□□ -0.25
C4orf48-202ENST00000409860 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
C4orf48-202ENST00000409860 IGLV5-52A0A0A0MRZ9 124 aa13.48□□□□□ -0.25
C4orf48-202ENST00000409860 C3orf79P0CE67 100 aa13.48□□□□□ -0.25
C4orf48-202ENST00000409860 PLNP26678 52 aa13.48□□□□□ -0.25
C4orf48-202ENST00000409860 SMIM1B2RUZ4 78 aa13.46□□□□□ -0.25
C4orf48-202ENST00000409860 DPM2O94777 84 aa13.46□□□□□ -0.25
C4orf48-202ENST00000409860 SPINK8P0C7L1 97 aa13.46□□□□□ -0.25
C4orf48-202ENST00000409860 PMCHL2Q9BQD1 86 aa13.46□□□□□ -0.25
C4orf48-202ENST00000409860 DNAH11Q96DT5 4516 aa13.45□□□□□ -0.26
C4orf48-202ENST00000409860 PRSS2P07478 247 aa13.45□□□□□ -0.26
C4orf48-202ENST00000409860 CNBPP62633 177 aaKnown RBP13.45□□□□□ -0.26
C4orf48-202ENST00000409860 LINC00526Q96FQ7 95 aa13.45□□□□□ -0.26
C4orf48-202ENST00000409860 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.44□□□□□ -0.26
C4orf48-202ENST00000409860 C20orf202A1L168 122 aa13.44□□□□□ -0.26
C4orf48-202ENST00000409860 IGKCP01834 107 aa13.44□□□□□ -0.26
C4orf48-202ENST00000409860 FUSP35637 526 aaKnown RBP eCLIP13.44□□□□□ -0.26
C4orf48-202ENST00000409860 LINC01545Q5VT33 79 aa13.44□□□□□ -0.26
C4orf48-202ENST00000409860 C2orf48Q96LS8 159 aa13.44□□□□□ -0.26
C4orf48-202ENST00000409860 TOMM7Q9P0U1 55 aa13.44□□□□□ -0.26
C4orf48-202ENST00000409860 F8WDY8 70 aa13.42□□□□□ -0.26
C4orf48-202ENST00000409860 Q8IZM0 81 aa13.42□□□□□ -0.26
C4orf48-202ENST00000409860 CAMK2N2Q96S95 79 aa13.42□□□□□ -0.26
C4orf48-202ENST00000409860 C16orf90A8MZG2 172 aa13.41□□□□□ -0.26
C4orf48-202ENST00000409860 SLPIP03973 132 aa13.41□□□□□ -0.26
C4orf48-202ENST00000409860 SYCNQ0VAF6 134 aa13.41□□□□□ -0.26
C4orf48-202ENST00000409860 KIAA0087Q14695 138 aa13.41□□□□□ -0.26
C4orf48-202ENST00000409860 CARD19Q96LW7 228 aa13.41□□□□□ -0.26
C4orf48-202ENST00000409860 TMEM223A0PJW6 202 aa13.4□□□□□ -0.26
C4orf48-202ENST00000409860 NDUFA1O15239 70 aa13.4□□□□□ -0.26
C4orf48-202ENST00000409860 C6orf226Q5I0X4 101 aa13.4□□□□□ -0.26
C4orf48-202ENST00000409860 COX7B2Q8TF08 81 aa13.4□□□□□ -0.26
C4orf48-202ENST00000409860 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
C4orf48-202ENST00000409860 PKD1P98161 4303 aa13.39□□□□□ -0.27
C4orf48-202ENST00000409860 HECTD4Q9Y4D8 3996 aa13.38□□□□□ -0.27
C4orf48-202ENST00000409860 GCSHP23434 173 aa13.38□□□□□ -0.27
C4orf48-202ENST00000409860 CXCL5P42830 114 aa13.38□□□□□ -0.27
C4orf48-202ENST00000409860 AKR1D1P51857 326 aa13.38□□□□□ -0.27
C4orf48-202ENST00000409860 CKS1BP61024 79 aa13.38□□□□□ -0.27
C4orf48-202ENST00000409860 HERVK_113P61574 105 aa13.38□□□□□ -0.27
C4orf48-202ENST00000409860 Q6ZRU5 148 aa13.37□□□□□ -0.27
C4orf48-202ENST00000409860 C9orf163Q8N9P6 203 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms