RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 KDM3BQ7LBC6 1761 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 A0A1W2PNN7 141 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 Q6ZRX8 168 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 C11orf21Q9P2W6 132 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 SMAD5-AS1Q9Y6J3 95 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 ARHGEF17Q96PE2 2063 aaPredicted RBP2.83□□□□□ -1.96
RGPD1-202ENST00000409776 PIKFYVEQ9Y2I7 2098 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 I3L2K1 104 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 TDRD15B5MCY1 1934 aaKnown RBP2.83□□□□□ -1.96
RGPD1-202ENST00000409776 K7EQZ3 153 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 M0R2N4 97 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 LINC00310P59036 64 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 LRRK1Q38SD2 2015 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 UNQ6190/PRO20217Q6UXQ8 127 aa2.83□□□□□ -1.96
RGPD1-202ENST00000409776 BSNQ9UPA5 3926 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 FER1L5A0AVI2 2057 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 C10orf99Q6UWK7 81 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 APC2O95996 2303 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 GLI3P10071 1580 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 MRGPRG-AS1Q2M3A8 158 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 ZNF580Q9UK33 172 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 CDK5RAP2Q96SN8 1893 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 M0QY20 66 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 LY6G6CO95867 125 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 Q8N2B8 174 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 C20orf166-AS1Q96NR2 134 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 KIF25-AS1Q9Y6Z4 181 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 NHSL1Q5SYE7 1610 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 AHCTF1Q8WYP5 2266 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 TJP1Q07157 1748 aa2.82□□□□□ -1.96
RGPD1-202ENST00000409776 SHROOM3Q8TF72 1996 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 LOC110117498A0A087WWA1 95 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 ZFP36P26651 326 aaKnown RBP2.81□□□□□ -1.96
RGPD1-202ENST00000409776 ZNF831Q5JPB2 1677 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 ZNF503-AS2A6NEH8 195 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 SPANXA2-OT1Q8N9U9 137 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 SIGLEC1Q9BZZ2 1709 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 DSCAML1Q8TD84 2053 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 DNAH10OSP0CZ25 163 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 PDCD11Q14690 1871 aaKnown RBP2.81□□□□□ -1.96
RGPD1-202ENST00000409776 CSMD3Q7Z407 3707 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 A8MTW9 85 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 CACNA1GO43497 2377 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 ABCA1O95477 2261 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 IGLV5-52A0A0A0MRZ9 124 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 ZNF236Q9UL36 1845 aa2.81□□□□□ -1.96
RGPD1-202ENST00000409776 MGAMO43451 1857 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 LELP1Q5T871 98 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 C4AP0C0L4 1744 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 C4BP0C0L5 1744 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-202ENST00000409776 TOGARAM1Q9Y4F4 1720 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 PTPRZ1P23471 2315 aaPredicted RBP2.8□□□□□ -1.96
RGPD1-202ENST00000409776 TRPM6Q9BX84 2022 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 LINC00242Q5T6M2 205 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 MED13Q9UHV7 2174 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 CASP8AP2Q9UKL3 1982 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 ALS2Q96Q42 1657 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 GREB1Q4ZG55 1949 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 LINC00114Q6XXX2 140 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 TAF1P21675 1872 aa2.8□□□□□ -1.96
RGPD1-202ENST00000409776 PCNX3Q9H6A9 2034 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 TNRC6CQ9HCJ0 1690 aaKnown RBP2.79□□□□□ -1.96
RGPD1-202ENST00000409776 MKI67P46013 3256 aaKnown RBP2.79□□□□□ -1.96
RGPD1-202ENST00000409776 C9orf92A6NGG3 77 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 PHF3Q92576 2039 aaKnown RBP2.79□□□□□ -1.96
RGPD1-202ENST00000409776 TP53BP1Q12888 1972 aaPredicted RBP2.79□□□□□ -1.96
RGPD1-202ENST00000409776 DEFB1P60022 68 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.79□□□□□ -1.96
RGPD1-202ENST00000409776 FREM1Q5H8C1 2179 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 SCN4AP35499 1836 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 WNK3Q9BYP7 1800 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 LCE2AQ5TA79 106 aaPredicted RBP2.79□□□□□ -1.96
RGPD1-202ENST00000409776 COL6A6A6NMZ7 2263 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 C5P01031 1676 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 PLCH1Q4KWH8 1693 aa2.79□□□□□ -1.96
RGPD1-202ENST00000409776 PROK1P58294 105 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 LAMA4Q16363 1823 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 MARF1Q9Y4F3 1742 aaKnown RBP2.78□□□□□ -1.96
RGPD1-202ENST00000409776 A0A1W2PNM2 257 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 LAMB4A4D0S4 1761 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 DSCAMO60469 2012 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 K7EIM0 57 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 ASB16-AS1Q495Z4 193 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 Q8N7P7 452 aa2.78□□□□□ -1.96
RGPD1-202ENST00000409776 TPRP12270 2363 aaKnown RBP2.78□□□□□ -1.96
RGPD1-202ENST00000409776 TRPM3Q9HCF6 1732 aaPredicted RBP2.78□□□□□ -1.97
RGPD1-202ENST00000409776 PAPPAQ13219 1627 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 TNCP24821 2201 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 MUC4Q99102 2169 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 SMCPP49901 116 aaPredicted RBP2.77□□□□□ -1.97
RGPD1-202ENST00000409776 PKD1L3Q7Z443 1732 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 PEAK1Q9H792 1746 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 COL16A1Q07092 1604 aaPredicted RBP2.77□□□□□ -1.97
RGPD1-202ENST00000409776 HRES1P13985 223 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 MAPK1IP1LQ8NDC0 245 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 SDK1Q7Z5N4 2213 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 SCN7AQ01118 1682 aa2.77□□□□□ -1.97
RGPD1-202ENST00000409776 HCFC1P51610 2035 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms