RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 UBE2D1P51668 147 aa10.66□□□□□ -0.7
SHANK2-204ENST00000409530 TIRAPP58753 221 aa10.66□□□□□ -0.7
SHANK2-204ENST00000409530 TP73-AS1Q9UF72 201 aa10.66□□□□□ -0.7
SHANK2-204ENST00000409530 A0A1B0GUV1 79 aa10.65□□□□□ -0.7
SHANK2-204ENST00000409530 HSBP1L1C9JCN9 74 aa10.65□□□□□ -0.7
SHANK2-204ENST00000409530 REG3AQ06141 175 aa10.65□□□□□ -0.7
SHANK2-204ENST00000409530 MUC7Q8TAX7 377 aa10.65□□□□□ -0.7
SHANK2-204ENST00000409530 GEMIN7Q9H840 131 aaKnown RBP10.65□□□□□ -0.7
SHANK2-204ENST00000409530 XCL1P47992 114 aa10.64□□□□□ -0.71
SHANK2-204ENST00000409530 COX6A2Q02221 97 aa10.64□□□□□ -0.71
SHANK2-204ENST00000409530 UBE2WQ96B02 151 aa10.64□□□□□ -0.71
SHANK2-204ENST00000409530 COX11Q9Y6N1 276 aa10.64□□□□□ -0.71
SHANK2-204ENST00000409530 CRPP02741 224 aa10.64□□□□□ -0.71
SHANK2-204ENST00000409530 SIVA1O15304 175 aa10.63□□□□□ -0.71
SHANK2-204ENST00000409530 NMUP48645 174 aa10.63□□□□□ -0.71
SHANK2-204ENST00000409530 LINC00242Q5T6M2 205 aa10.63□□□□□ -0.71
SHANK2-204ENST00000409530 ZNF22P17026 224 aaPredicted RBP10.63□□□□□ -0.71
SHANK2-204ENST00000409530 LINC00959A0A1B0GUT2 108 aa10.62□□□□□ -0.71
SHANK2-204ENST00000409530 CCL25O15444 150 aa10.62□□□□□ -0.71
SHANK2-204ENST00000409530 PTTG1IPP53801 180 aa10.62□□□□□ -0.71
SHANK2-204ENST00000409530 UBE2V1Q13404 147 aa10.62□□□□□ -0.71
SHANK2-204ENST00000409530 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
SHANK2-204ENST00000409530 Q9HAA7 133 aa10.62□□□□□ -0.71
SHANK2-204ENST00000409530 SPINK8P0C7L1 97 aa10.61□□□□□ -0.71
SHANK2-204ENST00000409530 CDKN2A-AS1Q9UH64 79 aa10.61□□□□□ -0.71
SHANK2-204ENST00000409530 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
SHANK2-204ENST00000409530 IGKV2D-26A0A0A0MRZ7 120 aa10.6□□□□□ -0.71
SHANK2-204ENST00000409530 TINCRA0A1B0GVN0 87 aa10.6□□□□□ -0.71
SHANK2-204ENST00000409530 SLC25A34Q6PIV7 304 aa10.6□□□□□ -0.71
SHANK2-204ENST00000409530 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
SHANK2-204ENST00000409530 TRAV8-3A0A0A6YYJ7 113 aa10.6□□□□□ -0.71
SHANK2-204ENST00000409530 SS18Q15532 418 aa10.6□□□□□ -0.71
SHANK2-204ENST00000409530 Q9H8V8 135 aa10.6□□□□□ -0.71
SHANK2-204ENST00000409530 LINC01556Q5JQF7 62 aa10.59□□□□□ -0.71
SHANK2-204ENST00000409530 CFAP161Q6P656 301 aa10.59□□□□□ -0.71
SHANK2-204ENST00000409530 ENHOQ6UWT2 76 aa10.59□□□□□ -0.71
SHANK2-204ENST00000409530 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
SHANK2-204ENST00000409530 HERVK_113P63121 156 aa10.58□□□□□ -0.72
SHANK2-204ENST00000409530 CHCHD10Q8WYQ3 142 aaPredicted RBP10.58□□□□□ -0.72
SHANK2-204ENST00000409530 DNAH1Q9P2D7 4330 aa10.58□□□□□ -0.72
SHANK2-204ENST00000409530 Q6ZVH6 145 aa10.58□□□□□ -0.72
SHANK2-204ENST00000409530 DNAH10OSP0CZ25 163 aa10.57□□□□□ -0.72
SHANK2-204ENST00000409530 HERVK_113P61574 105 aa10.56□□□□□ -0.72
SHANK2-204ENST00000409530 BVES-AS1Q5T3Y7 98 aa10.56□□□□□ -0.72
SHANK2-204ENST00000409530 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
SHANK2-204ENST00000409530 TMEM223A0PJW6 202 aa10.55□□□□□ -0.72
SHANK2-204ENST00000409530 UPK3BQ9BT76 320 aa10.55□□□□□ -0.72
SHANK2-204ENST00000409530 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
SHANK2-204ENST00000409530 GAGE12HA6NDE8 117 aa10.55□□□□□ -0.72
SHANK2-204ENST00000409530 SEC11AP67812 179 aa10.55□□□□□ -0.72
SHANK2-204ENST00000409530 PRR34Q9NV39 138 aa10.55□□□□□ -0.72
SHANK2-204ENST00000409530 H3BRM9 83 aa10.54□□□□□ -0.72
SHANK2-204ENST00000409530 K7EP13 123 aa10.54□□□□□ -0.72
SHANK2-204ENST00000409530 TSPEAR-AS2P59090 65 aa10.54□□□□□ -0.72
SHANK2-204ENST00000409530 CASC10Q5T4H9 136 aa10.54□□□□□ -0.72
SHANK2-204ENST00000409530 TOMM7Q9P0U1 55 aa10.54□□□□□ -0.72
SHANK2-204ENST00000409530 TAX1BP3O14907 124 aa10.54□□□□□ -0.72
SHANK2-204ENST00000409530 KRTAP1-5Q9BYS1 174 aa10.54□□□□□ -0.72
SHANK2-204ENST00000409530 COX8AP10176 69 aa10.53□□□□□ -0.72
SHANK2-204ENST00000409530 M0R2N4 97 aa10.52□□□□□ -0.72
SHANK2-204ENST00000409530 IGLV5-45A0A087WSX0 123 aa10.52□□□□□ -0.73
SHANK2-204ENST00000409530 IGHV3OR16-9A0A0B4J2B5 98 aa10.52□□□□□ -0.73
SHANK2-204ENST00000409530 SMIM1B2RUZ4 78 aa10.52□□□□□ -0.73
SHANK2-204ENST00000409530 E9PLD3 99 aa10.52□□□□□ -0.73
SHANK2-204ENST00000409530 VAMP3Q15836 100 aa10.52□□□□□ -0.73
SHANK2-204ENST00000409530 FAM19A3Q7Z5A8 133 aa10.52□□□□□ -0.73
SHANK2-204ENST00000409530 C1orf43Q9BWL3 253 aa10.52□□□□□ -0.73
SHANK2-204ENST00000409530 MALP21145 153 aa10.51□□□□□ -0.73
SHANK2-204ENST00000409530 MIAQ16674 131 aa10.51□□□□□ -0.73
SHANK2-204ENST00000409530 LY6G6CO95867 125 aa10.51□□□□□ -0.73
SHANK2-204ENST00000409530 LGALS3P17931 250 aaKnown RBP10.51□□□□□ -0.73
SHANK2-204ENST00000409530 CD164L2Q6UWJ8 174 aa10.51□□□□□ -0.73
SHANK2-204ENST00000409530 COX7A2LO14548 114 aa10.5□□□□□ -0.73
SHANK2-204ENST00000409530 FOXI1Q12951 378 aa10.5□□□□□ -0.73
SHANK2-204ENST00000409530 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
SHANK2-204ENST00000409530 J3QQQ9 107 aa10.49□□□□□ -0.73
SHANK2-204ENST00000409530 MAPKAPK5-AS1Q8N8E1 139 aa10.49□□□□□ -0.73
SHANK2-204ENST00000409530 DNAH10Q8IVF4 4471 aa10.49□□□□□ -0.73
SHANK2-204ENST00000409530 ZNF815PA8K554 130 aa10.49□□□□□ -0.73
SHANK2-204ENST00000409530 C2orf91Q6ZV80 131 aa10.49□□□□□ -0.73
SHANK2-204ENST00000409530 LEPROTO15243 131 aa10.48□□□□□ -0.73
SHANK2-204ENST00000409530 C10orf126Q8N4M7 172 aa10.48□□□□□ -0.73
SHANK2-204ENST00000409530 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
SHANK2-204ENST00000409530 A0A087WZ39 114 aa10.48□□□□□ -0.73
SHANK2-204ENST00000409530 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
SHANK2-204ENST00000409530 VPS13DQ5THJ4 4388 aa10.47□□□□□ -0.73
SHANK2-204ENST00000409530 TRAV8-4A0A0B4J246 113 aa10.47□□□□□ -0.73
SHANK2-204ENST00000409530 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
SHANK2-204ENST00000409530 LECT2O14960 151 aa10.46□□□□□ -0.74
SHANK2-204ENST00000409530 KMT2AQ03164 3969 aa10.45□□□□□ -0.74
SHANK2-204ENST00000409530 HIGD2BQ4VC39 106 aa10.45□□□□□ -0.74
SHANK2-204ENST00000409530 SCGB1D4Q6XE38 83 aa10.45□□□□□ -0.74
SHANK2-204ENST00000409530 BOD1L2Q8IYS8 172 aa10.45□□□□□ -0.74
SHANK2-204ENST00000409530 PLEKHB2Q96CS7 222 aa10.45□□□□□ -0.74
SHANK2-204ENST00000409530 NBDYA0A0U1RRE5 68 aa10.45□□□□□ -0.74
SHANK2-204ENST00000409530 COX7B2Q8TF08 81 aa10.45□□□□□ -0.74
SHANK2-204ENST00000409530 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
SHANK2-204ENST00000409530 MYMXA0A1B0GTQ4 84 aa10.44□□□□□ -0.74
SHANK2-204ENST00000409530 C3orf84H3BNL1 204 aa10.44□□□□□ -0.74
SHANK2-204ENST00000409530 NDUFA12Q9UI09 145 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms