RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 HERVK_113P63121 156 aa12.17□□□□□ -0.46
LRRTM1-202ENST00000409148 TMEM101Q96IK0 257 aa12.17□□□□□ -0.46
LRRTM1-202ENST00000409148 FAM19A3Q7Z5A8 133 aa12.17□□□□□ -0.46
LRRTM1-202ENST00000409148 C10orf126Q8N4M7 172 aa12.17□□□□□ -0.46
LRRTM1-202ENST00000409148 ANKRD29Q8N6D5 301 aa12.17□□□□□ -0.46
LRRTM1-202ENST00000409148 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
LRRTM1-202ENST00000409148 APOC4P55056 127 aa12.16□□□□□ -0.46
LRRTM1-202ENST00000409148 M0QXV9 152 aa12.16□□□□□ -0.46
LRRTM1-202ENST00000409148 CDC42SE2Q9NRR3 84 aa12.16□□□□□ -0.46
LRRTM1-202ENST00000409148 CDKN2A-AS1Q9UH64 79 aa12.16□□□□□ -0.46
LRRTM1-202ENST00000409148 NDUFA12Q9UI09 145 aa12.16□□□□□ -0.46
LRRTM1-202ENST00000409148 B5MCH6 92 aa12.14□□□□□ -0.47
LRRTM1-202ENST00000409148 LINC00242Q5T6M2 205 aa12.14□□□□□ -0.47
LRRTM1-202ENST00000409148 CFC1BP0CG36 223 aa12.14□□□□□ -0.47
LRRTM1-202ENST00000409148 CFC1P0CG37 223 aa12.14□□□□□ -0.47
LRRTM1-202ENST00000409148 WFDC9Q8NEX5 89 aa12.14□□□□□ -0.47
LRRTM1-202ENST00000409148 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
LRRTM1-202ENST00000409148 COX6A2Q02221 97 aa12.13□□□□□ -0.47
LRRTM1-202ENST00000409148 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
LRRTM1-202ENST00000409148 TRAV13-1A0A0B4J241 112 aa12.12□□□□□ -0.47
LRRTM1-202ENST00000409148 CFAP161Q6P656 301 aa12.12□□□□□ -0.47
LRRTM1-202ENST00000409148 DEFB135Q30KP9 77 aa12.11□□□□□ -0.47
LRRTM1-202ENST00000409148 WIPF1O43516 503 aa12.11□□□□□ -0.47
LRRTM1-202ENST00000409148 A8MZ25 164 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 NDUFV3P56181 108 aaKnown RBP12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 MUSTN1Q8IVN3 82 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 SLC25A20O43772 301 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 SCGB1C2P0DMR2 95 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 GAGE2EQ4V326 116 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 FAM222AQ5U5X8 452 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 LITAFQ99732 161 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 GAGE2DQ9UEU5 116 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 PRO1854Q9UHT4 67 aa12.1□□□□□ -0.47
LRRTM1-202ENST00000409148 IGLV5-39A0A0G2JS06 123 aa12.09□□□□□ -0.47
LRRTM1-202ENST00000409148 A4D1N5 150 aa12.09□□□□□ -0.47
LRRTM1-202ENST00000409148 SPANXDQ9BXN6 97 aa12.09□□□□□ -0.47
LRRTM1-202ENST00000409148 SPANXCQ9NY87 97 aa12.09□□□□□ -0.47
LRRTM1-202ENST00000409148 PRO0255Q9UI72 69 aa12.09□□□□□ -0.47
LRRTM1-202ENST00000409148 NDUFA1O15239 70 aa12.08□□□□□ -0.47
LRRTM1-202ENST00000409148 GYPEP15421 78 aa12.08□□□□□ -0.47
LRRTM1-202ENST00000409148 Q6Q795 121 aa12.08□□□□□ -0.47
LRRTM1-202ENST00000409148 CHCHD5Q9BSY4 110 aa12.08□□□□□ -0.47
LRRTM1-202ENST00000409148 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
LRRTM1-202ENST00000409148 TIMM17BO60830 172 aa12.08□□□□□ -0.48
LRRTM1-202ENST00000409148 LINC01600Q96MT4 127 aa12.07□□□□□ -0.48
LRRTM1-202ENST00000409148 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
LRRTM1-202ENST00000409148 SMIM1B2RUZ4 78 aa12.07□□□□□ -0.48
LRRTM1-202ENST00000409148 SNCGO76070 127 aa12.07□□□□□ -0.48
LRRTM1-202ENST00000409148 VWFP04275 2813 aa12.06□□□□□ -0.48
LRRTM1-202ENST00000409148 TENM1Q9UKZ4 2725 aa12.06□□□□□ -0.48
LRRTM1-202ENST00000409148 IGHV4-28A0A0C4DH34 117 aa12.06□□□□□ -0.48
LRRTM1-202ENST00000409148 MIAQ16674 131 aa12.06□□□□□ -0.48
LRRTM1-202ENST00000409148 C9JAW5 83 aa12.05□□□□□ -0.48
LRRTM1-202ENST00000409148 MIFP14174 115 aa12.05□□□□□ -0.48
LRRTM1-202ENST00000409148 TEP1Q99973 2627 aaKnown RBP12.05□□□□□ -0.48
LRRTM1-202ENST00000409148 CCDC179H3BU77 68 aa12.05□□□□□ -0.48
LRRTM1-202ENST00000409148 PRSS2P07478 247 aa12.05□□□□□ -0.48
LRRTM1-202ENST00000409148 IFITM1P13164 125 aa12.05□□□□□ -0.48
LRRTM1-202ENST00000409148 F5H768 121 aa12.04□□□□□ -0.48
LRRTM1-202ENST00000409148 PAX4O43316 350 aa12.04□□□□□ -0.48
LRRTM1-202ENST00000409148 EIF4EBP3O60516 100 aaPredicted RBP12.04□□□□□ -0.48
LRRTM1-202ENST00000409148 IGHV3-33P01772 117 aa12.04□□□□□ -0.48
LRRTM1-202ENST00000409148 CIRBPQ14011 172 aaKnown RBP12.04□□□□□ -0.48
LRRTM1-202ENST00000409148 ADAMTSL4-AS1Q5T5F5 129 aa12.04□□□□□ -0.48
LRRTM1-202ENST00000409148 ATRQ13535 2644 aa12.03□□□□□ -0.48
LRRTM1-202ENST00000409148 IGLV4-60A0A075B6I1 120 aa12.03□□□□□ -0.48
LRRTM1-202ENST00000409148 IGHV4-30-4P0DP06 118 aa12.03□□□□□ -0.48
LRRTM1-202ENST00000409148 DAD1P61803 113 aa12.03□□□□□ -0.48
LRRTM1-202ENST00000409148 TTC32Q5I0X7 151 aa12.03□□□□□ -0.48
LRRTM1-202ENST00000409148 SHISA2Q6UWI4 295 aa12.03□□□□□ -0.48
LRRTM1-202ENST00000409148 Q9H8V8 135 aa12.03□□□□□ -0.48
LRRTM1-202ENST00000409148 DEFB4AO15263 64 aa12.02□□□□□ -0.48
LRRTM1-202ENST00000409148 RPL13AP40429 203 aaKnown RBP12.02□□□□□ -0.49
LRRTM1-202ENST00000409148 Q8NAQ8 132 aa12.02□□□□□ -0.49
LRRTM1-202ENST00000409148 NTN5Q8WTR8 489 aaPredicted RBP12.01□□□□□ -0.49
LRRTM1-202ENST00000409148 HERV-K104P63124 156 aa12.01□□□□□ -0.49
LRRTM1-202ENST00000409148 IGKV3OR2-268A0A0C4DH90 116 aa11.99□□□□□ -0.49
LRRTM1-202ENST00000409148 MAST4O15021 2626 aa11.99□□□□□ -0.49
LRRTM1-202ENST00000409148 ATP5G1P05496 136 aa11.99□□□□□ -0.49
LRRTM1-202ENST00000409148 PRIMA1Q86XR5 153 aa11.99□□□□□ -0.49
LRRTM1-202ENST00000409148 A0A1B0GUV1 79 aa11.98□□□□□ -0.49
LRRTM1-202ENST00000409148 SPART-AS1P0CW21 52 aa11.98□□□□□ -0.49
LRRTM1-202ENST00000409148 ATXN8Q156A1 80 aa11.98□□□□□ -0.49
LRRTM1-202ENST00000409148 LINC01620Q4KN68 170 aa11.98□□□□□ -0.49
LRRTM1-202ENST00000409148 SMIM20Q8N5G0 67 aa11.98□□□□□ -0.49
LRRTM1-202ENST00000409148 ZNF625Q96I27 306 aaPredicted RBP11.98□□□□□ -0.49
LRRTM1-202ENST00000409148 KRTAP24-1Q3LI83 254 aa11.98□□□□□ -0.49
LRRTM1-202ENST00000409148 TRAV8-4A0A0B4J246 113 aa11.97□□□□□ -0.49
LRRTM1-202ENST00000409148 NPC2P61916 151 aa11.97□□□□□ -0.49
LRRTM1-202ENST00000409148 COPS9Q8WXC6 57 aa11.97□□□□□ -0.49
LRRTM1-202ENST00000409148 CELA1Q9UNI1 258 aa11.97□□□□□ -0.49
LRRTM1-202ENST00000409148 A0A096LPF7 62 aa11.96□□□□□ -0.49
LRRTM1-202ENST00000409148 Q1RN00 199 aa11.96□□□□□ -0.49
LRRTM1-202ENST00000409148 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.49
LRRTM1-202ENST00000409148 TRBV10-2A0A0K0K1G8 114 aa11.96□□□□□ -0.5
LRRTM1-202ENST00000409148 TEX49A0A1B0GTD5 131 aa11.96□□□□□ -0.5
LRRTM1-202ENST00000409148 MEIG1Q5JSS6 88 aa11.96□□□□□ -0.5
LRRTM1-202ENST00000409148 IGHV3OR16-9A0A0B4J2B5 98 aa11.95□□□□□ -0.5
LRRTM1-202ENST00000409148 H7C2G1 150 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms