RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 BAALC-AS2P0C853 105 aa3.65□□□□□ -1.82
CNGA1-202ENST00000402813 RPL39P5Q59GN2 51 aa3.65□□□□□ -1.82
CNGA1-202ENST00000402813 GOLGB1Q14789 3259 aaKnown RBP3.65□□□□□ -1.83
CNGA1-202ENST00000402813 IGHV3OR16-8A0A075B7F1 116 aa3.65□□□□□ -1.83
CNGA1-202ENST00000402813 C16orf74Q96GX8 76 aa3.65□□□□□ -1.83
CNGA1-202ENST00000402813 TRBV7-4A0A0J9YYF1 115 aa3.65□□□□□ -1.83
CNGA1-202ENST00000402813 ODF3BA8MYP8 253 aa3.65□□□□□ -1.83
CNGA1-202ENST00000402813 FXYD3Q14802 87 aa3.65□□□□□ -1.83
CNGA1-202ENST00000402813 KRTAP26-1Q6PEX3 210 aa3.65□□□□□ -1.83
CNGA1-202ENST00000402813 A0A1W2PPR1 153 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 FSHBP01225 129 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 ARMS2P0C7Q2 107 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 SMIM2Q9BVW6 85 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 H3BQ85 93 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 K7EIM0 57 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 IGKV1-17P01599 117 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 Q1RN00 199 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 Q8TAT8 98 aa3.64□□□□□ -1.83
CNGA1-202ENST00000402813 A0A1W2PNM2 257 aa3.63□□□□□ -1.83
CNGA1-202ENST00000402813 H7C423 109 aa3.63□□□□□ -1.83
CNGA1-202ENST00000402813 TFF1P04155 84 aa3.63□□□□□ -1.83
CNGA1-202ENST00000402813 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
CNGA1-202ENST00000402813 TRBV30A0A0K0K1B3 111 aa3.63□□□□□ -1.83
CNGA1-202ENST00000402813 SPINK14Q6IE38 97 aa3.63□□□□□ -1.83
CNGA1-202ENST00000402813 UBALD1Q8TB05 177 aa3.63□□□□□ -1.83
CNGA1-202ENST00000402813 SPTBP11277 2137 aa3.62□□□□□ -1.83
CNGA1-202ENST00000402813 CACNA1EQ15878 2313 aa3.62□□□□□ -1.83
CNGA1-202ENST00000402813 TRAV10A0A0B4J240 114 aa3.62□□□□□ -1.83
CNGA1-202ENST00000402813 COX6B1P14854 86 aa3.62□□□□□ -1.83
CNGA1-202ENST00000402813 LORP23490 312 aaPredicted RBP3.62□□□□□ -1.83
CNGA1-202ENST00000402813 TMEM254Q8TBM7 123 aa3.62□□□□□ -1.83
CNGA1-202ENST00000402813 D6R8Y8 96 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 DEFB113Q30KQ7 82 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 LINC00322Q6ZN03 302 aaPredicted RBP3.61□□□□□ -1.83
CNGA1-202ENST00000402813 BAHCC1Q9P281 2608 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 CLPSL1A2RUU4 121 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 IGHV3-53P01767 116 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 CRIP1P50238 77 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 KIF25-AS1Q9Y6Z4 181 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 KIAA0100Q14667 2235 aaKnown RBP3.61□□□□□ -1.83
CNGA1-202ENST00000402813 KRTAP4-8A0A0G2JLE6 195 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 A8MTW9 85 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
CNGA1-202ENST00000402813 CACNA1CQ13936 2221 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 ABCA7Q8IZY2 2146 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 TTC28Q96AY4 2481 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 A0A0C4DFX4 3053 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 TRAV21A0A0B4J279 112 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
CNGA1-202ENST00000402813 USMG5Q96IX5 58 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 MALRD1Q5VYJ5 2156 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 A0A1B0GUV1 79 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 ELOF1P60002 83 aaKnown RBP3.6□□□□□ -1.83
CNGA1-202ENST00000402813 CEP290O15078 2479 aa3.6□□□□□ -1.83
CNGA1-202ENST00000402813 IGHV3-33P01772 117 aa3.59□□□□□ -1.83
CNGA1-202ENST00000402813 CSAG1Q6PB30 78 aa3.59□□□□□ -1.83
CNGA1-202ENST00000402813 Q8NAQ8 132 aa3.59□□□□□ -1.83
CNGA1-202ENST00000402813 MED13Q9UHV7 2174 aa3.59□□□□□ -1.84
CNGA1-202ENST00000402813 TRBV10-1A0A0K0K1A3 114 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 DEFB108AA8MXU0 73 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 NDUFA4O00483 81 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 MUSTN1Q8IVN3 82 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 SNURFQ9Y675 71 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 MUC6Q6W4X9 2439 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 IGHV3-64A0A075B6Q5 118 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 ESPL1Q14674 2120 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 Q5W150 140 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 IGFL4Q6B9Z1 124 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 LINC00167Q96N53 147 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 PRR34Q9NV39 138 aa3.58□□□□□ -1.84
CNGA1-202ENST00000402813 A0A087WVE0 104 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 A0A1B0GU33 70 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 POLR2KP53803 58 aaKnown RBP3.57□□□□□ -1.84
CNGA1-202ENST00000402813 SPINK9Q5DT21 86 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 C9orf129Q5T035 196 aaKnown RBP3.57□□□□□ -1.84
CNGA1-202ENST00000402813 LITAFQ99732 161 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 IGIPA6NJ69 53 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 KPRPQ5T749 579 aaPredicted RBP3.57□□□□□ -1.84
CNGA1-202ENST00000402813 A0A0J9YY99 117 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 IGHV3-30P01768 117 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 CFC1P0CG37 223 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 IGHV3-30-5P0DP03 117 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 KRTAP3-1Q9BYR8 98 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 SPAG17Q6Q759 2223 aa3.57□□□□□ -1.84
CNGA1-202ENST00000402813 SDK2Q58EX2 2172 aa3.56□□□□□ -1.84
CNGA1-202ENST00000402813 CACNA1BQ00975 2339 aa3.56□□□□□ -1.84
CNGA1-202ENST00000402813 CTSGP08311 255 aa3.56□□□□□ -1.84
CNGA1-202ENST00000402813 C1orf137Q5JT78 98 aa3.56□□□□□ -1.84
CNGA1-202ENST00000402813 MRPL36Q9P0J6 103 aaKnown RBP3.56□□□□□ -1.84
CNGA1-202ENST00000402813 RPL36ALQ969Q0 106 aaKnown RBP3.56□□□□□ -1.84
CNGA1-202ENST00000402813 USF3Q68DE3 2245 aa3.56□□□□□ -1.84
CNGA1-202ENST00000402813 ASCC3Q8N3C0 2202 aaKnown RBP3.56□□□□□ -1.84
CNGA1-202ENST00000402813 HEATR1Q9H583 2144 aaKnown RBP3.55□□□□□ -1.84
CNGA1-202ENST00000402813 DOCK10Q96BY6 2186 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 CHD8Q9HCK8 2581 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 IGLV7-43P04211 117 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 PRR15LQ9BU68 103 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 SPINK4O60575 86 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms