RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 BAGE3Q86Y29 109 aa11.53□□□□□ -0.56
CTNS-203ENST00000399306 LINC01561Q8N1V8 128 aa11.53□□□□□ -0.56
CTNS-203ENST00000399306 KRTAP3-3Q9BYR6 98 aa11.53□□□□□ -0.56
CTNS-203ENST00000399306 KRTAP3-2Q9BYR7 98 aa11.53□□□□□ -0.56
CTNS-203ENST00000399306 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.52□□□□□ -0.57
CTNS-203ENST00000399306 hDV102S1A0JD36 115 aa11.52□□□□□ -0.57
CTNS-203ENST00000399306 ATP5LO75964 103 aa11.52□□□□□ -0.57
CTNS-203ENST00000399306 APOMO95445 188 aa11.52□□□□□ -0.57
CTNS-203ENST00000399306 A0A087WZ39 114 aa11.5□□□□□ -0.57
CTNS-203ENST00000399306 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.5□□□□□ -0.57
CTNS-203ENST00000399306 MALP21145 153 aa11.5□□□□□ -0.57
CTNS-203ENST00000399306 HERVK_113P63121 156 aa11.5□□□□□ -0.57
CTNS-203ENST00000399306 PMVKQ15126 192 aa11.5□□□□□ -0.57
CTNS-203ENST00000399306 DNAH8Q96JB1 4490 aa11.49□□□□□ -0.57
CTNS-203ENST00000399306 HSBP1O75506 76 aa11.49□□□□□ -0.57
CTNS-203ENST00000399306 CDK2AP2O75956 126 aa11.49□□□□□ -0.57
CTNS-203ENST00000399306 C9orf163Q8N9P6 203 aa11.49□□□□□ -0.57
CTNS-203ENST00000399306 OR10D4PQ8NGN7 298 aa11.49□□□□□ -0.57
CTNS-203ENST00000399306 F8WDY8 70 aa11.48□□□□□ -0.57
CTNS-203ENST00000399306 CST9LQ9H4G1 147 aa11.48□□□□□ -0.57
CTNS-203ENST00000399306 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
CTNS-203ENST00000399306 TINCRA0A1B0GVN0 87 aa11.47□□□□□ -0.57
CTNS-203ENST00000399306 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
CTNS-203ENST00000399306 RYR1P21817 5038 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.57
CTNS-203ENST00000399306 ZNF561-AS1K7EIQ3 104 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BKO60814 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 SERF1AO75920 110 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BJP06899 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BOP23527 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BBP33778 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 FUSP35637 526 aaKnown RBP eCLIP11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BDP58876 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 KRTAP10-1P60331 282 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BCP62807 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 COX6A2Q02221 97 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 PMCHL1Q16048 86 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST2H2BEQ16778 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.46□□□□□ -0.57
CTNS-203ENST00000399306 ZC2HC1BQ5TFG8 222 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BHQ93079 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BNQ99877 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 HIST1H2BMQ99879 126 aa11.46□□□□□ -0.57
CTNS-203ENST00000399306 LINC00310P59036 64 aa11.45□□□□□ -0.58
CTNS-203ENST00000399306 HIGD2BQ4VC39 106 aa11.45□□□□□ -0.58
CTNS-203ENST00000399306 GEMIN7Q9H840 131 aaKnown RBP11.45□□□□□ -0.58
CTNS-203ENST00000399306 KIAA1109Q2LD37 5005 aa11.45□□□□□ -0.58
CTNS-203ENST00000399306 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
CTNS-203ENST00000399306 SLPIP03973 132 aa11.44□□□□□ -0.58
CTNS-203ENST00000399306 Q6ZSA8 131 aa11.44□□□□□ -0.58
CTNS-203ENST00000399306 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
CTNS-203ENST00000399306 TRAV12-1A0A0B4J245 112 aa11.43□□□□□ -0.58
CTNS-203ENST00000399306 IFI27L1Q96BM0 104 aa11.43□□□□□ -0.58
CTNS-203ENST00000399306 A0A0J9YXV3 536 aa11.42□□□□□ -0.58
CTNS-203ENST00000399306 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
CTNS-203ENST00000399306 PACRGQ96M98 296 aaPredicted RBP11.42□□□□□ -0.58
CTNS-203ENST00000399306 IGLC3P0DOY3 106 aa11.41□□□□□ -0.58
CTNS-203ENST00000399306 COA6Q5JTJ3 125 aaKnown RBP11.41□□□□□ -0.58
CTNS-203ENST00000399306 FAM19A2Q8N3H0 131 aa11.41□□□□□ -0.58
CTNS-203ENST00000399306 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
CTNS-203ENST00000399306 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
CTNS-203ENST00000399306 LEPROTL1O95214 131 aa11.4□□□□□ -0.58
CTNS-203ENST00000399306 SYCNQ0VAF6 134 aa11.4□□□□□ -0.58
CTNS-203ENST00000399306 RNF151Q2KHN1 245 aa11.4□□□□□ -0.58
CTNS-203ENST00000399306 SDIM1Q6ZPB5 146 aa11.4□□□□□ -0.58
CTNS-203ENST00000399306 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
CTNS-203ENST00000399306 CDKN2A-AS1Q9UH64 79 aa11.4□□□□□ -0.58
CTNS-203ENST00000399306 HSPB8Q9UJY1 196 aa11.4□□□□□ -0.58
CTNS-203ENST00000399306 LINC00469Q8N7U9 141 aa11.39□□□□□ -0.59
CTNS-203ENST00000399306 NUPR1O60356 82 aa11.38□□□□□ -0.59
CTNS-203ENST00000399306 NDUFA6P56556 154 aa11.38□□□□□ -0.59
CTNS-203ENST00000399306 KIAA0087Q14695 138 aa11.38□□□□□ -0.59
CTNS-203ENST00000399306 Q8IZM0 81 aa11.38□□□□□ -0.59
CTNS-203ENST00000399306 CAMK2N2Q96S95 79 aa11.38□□□□□ -0.59
CTNS-203ENST00000399306 HSPG2P98160 4391 aa11.38□□□□□ -0.59
CTNS-203ENST00000399306 HERC2O95714 4834 aa11.37□□□□□ -0.59
CTNS-203ENST00000399306 H3BRM9 83 aa11.37□□□□□ -0.59
CTNS-203ENST00000399306 MRPL35Q9NZE8 188 aaKnown RBP11.37□□□□□ -0.59
CTNS-203ENST00000399306 NDUFA1O15239 70 aa11.36□□□□□ -0.59
CTNS-203ENST00000399306 XGP55808 180 aa11.36□□□□□ -0.59
CTNS-203ENST00000399306 CIRBPQ14011 172 aaKnown RBP11.36□□□□□ -0.59
CTNS-203ENST00000399306 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
CTNS-203ENST00000399306 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
CTNS-203ENST00000399306 CHTOPQ9Y3Y2 248 aaKnown RBP11.36□□□□□ -0.59
CTNS-203ENST00000399306 SMIM1B2RUZ4 78 aa11.35□□□□□ -0.59
CTNS-203ENST00000399306 LINC00526Q96FQ7 95 aa11.35□□□□□ -0.59
CTNS-203ENST00000399306 FAM30AQ9NZY2 134 aa11.35□□□□□ -0.59
CTNS-203ENST00000399306 F8VRH5 84 aa11.34□□□□□ -0.59
CTNS-203ENST00000399306 PRSS2P07478 247 aa11.34□□□□□ -0.59
CTNS-203ENST00000399306 CXCL5P42830 114 aa11.34□□□□□ -0.59
CTNS-203ENST00000399306 Q6ZRU5 148 aa11.34□□□□□ -0.59
CTNS-203ENST00000399306 TRBV30A0A0K0K1B3 111 aa11.33□□□□□ -0.6
CTNS-203ENST00000399306 ZNF22P17026 224 aaPredicted RBP11.33□□□□□ -0.6
CTNS-203ENST00000399306 LINC00474Q9P2X8 69 aa11.33□□□□□ -0.6
CTNS-203ENST00000399306 C6orf226Q5I0X4 101 aa11.32□□□□□ -0.6
CTNS-203ENST00000399306 IGLV5-39A0A0G2JS06 123 aa11.31□□□□□ -0.6
CTNS-203ENST00000399306 LOC107984640A0A0U1RRK4 108 aa11.31□□□□□ -0.6
CTNS-203ENST00000399306 C11orf86A6NJI1 115 aa11.31□□□□□ -0.6
CTNS-203ENST00000399306 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms