RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 LOC107984156A0A0G2JMH3 177 aa13.54□□□□□ -0.24
PDLIM2-204ENST00000397760 GAGE12JA6NER3 117 aa13.54□□□□□ -0.24
PDLIM2-204ENST00000397760 HTN3P15516 51 aa13.54□□□□□ -0.24
PDLIM2-204ENST00000397760 GAGE4Q13068 117 aa13.54□□□□□ -0.24
PDLIM2-204ENST00000397760 GAGE5Q13069 117 aa13.54□□□□□ -0.24
PDLIM2-204ENST00000397760 ARL17AQ8IVW1 177 aa13.54□□□□□ -0.24
PDLIM2-204ENST00000397760 TIMM21Q9BVV7 248 aa13.54□□□□□ -0.24
PDLIM2-204ENST00000397760 UBE2D4Q9Y2X8 147 aa13.54□□□□□ -0.24
PDLIM2-204ENST00000397760 LOC100131303A0A0U1RQF7 123 aa13.53□□□□□ -0.24
PDLIM2-204ENST00000397760 F5H768 121 aa13.53□□□□□ -0.24
PDLIM2-204ENST00000397760 IGHV3-30-3P0DP02 117 aa13.53□□□□□ -0.24
PDLIM2-204ENST00000397760 C11orf45Q8TAV5 145 aa13.53□□□□□ -0.24
PDLIM2-204ENST00000397760 IGHV1-58A0A0C4DH39 117 aa13.53□□□□□ -0.24
PDLIM2-204ENST00000397760 PSMB2P49721 201 aa13.52□□□□□ -0.25
PDLIM2-204ENST00000397760 SH2D6Q7Z4S9 175 aa13.52□□□□□ -0.25
PDLIM2-204ENST00000397760 IGHV3-38A0A0C4DH36 116 aa13.51□□□□□ -0.25
PDLIM2-204ENST00000397760 A0A0J9YXY3 114 aa13.51□□□□□ -0.25
PDLIM2-204ENST00000397760 PAX4O43316 350 aa13.51□□□□□ -0.25
PDLIM2-204ENST00000397760 SCGB1A1P11684 91 aa13.51□□□□□ -0.25
PDLIM2-204ENST00000397760 A4D1N5 150 aa13.5□□□□□ -0.25
PDLIM2-204ENST00000397760 NANOS2P60321 138 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-204ENST00000397760 Q6ZTC4 211 aa13.5□□□□□ -0.25
PDLIM2-204ENST00000397760 DNAH9Q9NYC9 4486 aa13.5□□□□□ -0.25
PDLIM2-204ENST00000397760 GAGE12HA6NDE8 117 aa13.5□□□□□ -0.25
PDLIM2-204ENST00000397760 M0QXV9 152 aa13.5□□□□□ -0.25
PDLIM2-204ENST00000397760 TENM3Q9P273 2699 aa13.49□□□□□ -0.25
PDLIM2-204ENST00000397760 GYPEP15421 78 aa13.49□□□□□ -0.25
PDLIM2-204ENST00000397760 DAZ4Q86SG3 579 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-204ENST00000397760 SIGMAR1Q99720 223 aa13.49□□□□□ -0.25
PDLIM2-204ENST00000397760 SPANXDQ9BXN6 97 aa13.49□□□□□ -0.25
PDLIM2-204ENST00000397760 DAZ3Q9NR90 486 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-204ENST00000397760 SPANXCQ9NY87 97 aa13.49□□□□□ -0.25
PDLIM2-204ENST00000397760 TRAV26-1A0A087WT03 109 aa13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 IGHV3-33P01772 117 aa13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 SMCPP49901 116 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 TIRAPP58753 221 aa13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 MUSTN1Q8IVN3 82 aa13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 VSIG2Q96IQ7 327 aa13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 NHLRC4P0CG21 123 aaPredicted RBP13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 FOXI1Q12951 378 aa13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 ERG28Q9UKR5 140 aa13.48□□□□□ -0.25
PDLIM2-204ENST00000397760 TIMM17BO60830 172 aa13.47□□□□□ -0.25
PDLIM2-204ENST00000397760 TCL1BO95988 128 aa13.47□□□□□ -0.25
PDLIM2-204ENST00000397760 IGLV5-45A0A087WSX0 123 aa13.46□□□□□ -0.25
PDLIM2-204ENST00000397760 LITAFQ99732 161 aa13.46□□□□□ -0.25
PDLIM2-204ENST00000397760 IGHV3-64A0A075B6Q5 118 aa13.46□□□□□ -0.26
PDLIM2-204ENST00000397760 LINC00694P0DN24 101 aa13.46□□□□□ -0.26
PDLIM2-204ENST00000397760 NDUFA12Q9UI09 145 aa13.46□□□□□ -0.26
PDLIM2-204ENST00000397760 SCGB1C2P0DMR2 95 aa13.45□□□□□ -0.26
PDLIM2-204ENST00000397760 SMAGPQ0VAQ4 97 aa13.45□□□□□ -0.26
PDLIM2-204ENST00000397760 ZFAND6Q6FIF0 208 aa13.45□□□□□ -0.26
PDLIM2-204ENST00000397760 CEMP1Q6PRD7 247 aaPredicted RBP13.45□□□□□ -0.26
PDLIM2-204ENST00000397760 TEN1Q86WV5 123 aa13.45□□□□□ -0.26
PDLIM2-204ENST00000397760 GEMIN7Q9H840 131 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-204ENST00000397760 CSDC2Q9Y534 153 aaKnown RBP13.45□□□□□ -0.26
PDLIM2-204ENST00000397760 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
PDLIM2-204ENST00000397760 MTURNQ8N3F0 131 aa13.44□□□□□ -0.26
PDLIM2-204ENST00000397760 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-204ENST00000397760 IGKV2-29A2NJV5 120 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-204ENST00000397760 Q6ZUT4 128 aa13.43□□□□□ -0.26
PDLIM2-204ENST00000397760 PPDPFLQ8WWR9 84 aa13.43□□□□□ -0.26
PDLIM2-204ENST00000397760 LINC01600Q96MT4 127 aa13.43□□□□□ -0.26
PDLIM2-204ENST00000397760 DEFB131BA0A096LNP1 70 aa13.42□□□□□ -0.26
PDLIM2-204ENST00000397760 TRAV8-3A0A0A6YYJ7 113 aa13.42□□□□□ -0.26
PDLIM2-204ENST00000397760 EIF4EBP3O60516 100 aaPredicted RBP13.42□□□□□ -0.26
PDLIM2-204ENST00000397760 IFITM1P13164 125 aa13.42□□□□□ -0.26
PDLIM2-204ENST00000397760 MIAQ16674 131 aa13.42□□□□□ -0.26
PDLIM2-204ENST00000397760 TRBV30A0A0K0K1B3 111 aa13.41□□□□□ -0.26
PDLIM2-204ENST00000397760 NTM-AS1Q6ZSK4 140 aa13.41□□□□□ -0.26
PDLIM2-204ENST00000397760 GTSF1LQ9H1H1 148 aa13.41□□□□□ -0.26
PDLIM2-204ENST00000397760 A0A096LPF7 62 aa13.41□□□□□ -0.26
PDLIM2-204ENST00000397760 DGAT2L7PQ6IED9 249 aa13.41□□□□□ -0.26
PDLIM2-204ENST00000397760 SFTA2Q6UW10 78 aa13.41□□□□□ -0.26
PDLIM2-204ENST00000397760 HERVK_113P63121 156 aa13.4□□□□□ -0.26
PDLIM2-204ENST00000397760 MRPL23Q16540 153 aaKnown RBP13.4□□□□□ -0.26
PDLIM2-204ENST00000397760 ICOSQ9Y6W8 199 aa13.4□□□□□ -0.26
PDLIM2-204ENST00000397760 MEGF8Q7Z7M0 2845 aa13.4□□□□□ -0.26
PDLIM2-204ENST00000397760 TRAV10A0A0B4J240 114 aa13.39□□□□□ -0.27
PDLIM2-204ENST00000397760 NDUFA1O15239 70 aa13.39□□□□□ -0.27
PDLIM2-204ENST00000397760 H3BNG1 76 aa13.39□□□□□ -0.27
PDLIM2-204ENST00000397760 RNASE13Q5GAN3 156 aaKnown RBP13.39□□□□□ -0.27
PDLIM2-204ENST00000397760 SPINK8P0C7L1 97 aa13.38□□□□□ -0.27
PDLIM2-204ENST00000397760 ATXN8Q156A1 80 aa13.38□□□□□ -0.27
PDLIM2-204ENST00000397760 PRKDCP78527 4128 aaKnown RBP13.37□□□□□ -0.27
PDLIM2-204ENST00000397760 TRBV6-8A0A0A6YYG3 113 aa13.36□□□□□ -0.27
PDLIM2-204ENST00000397760 IGLV5-39A0A0G2JS06 123 aa13.36□□□□□ -0.27
PDLIM2-204ENST00000397760 CDKN2A-AS1Q9UH64 79 aa13.36□□□□□ -0.27
PDLIM2-204ENST00000397760 SLC25A20O43772 301 aa13.36□□□□□ -0.27
PDLIM2-204ENST00000397760 PRSS2P07478 247 aa13.36□□□□□ -0.27
PDLIM2-204ENST00000397760 CIRBPQ14011 172 aaKnown RBP13.36□□□□□ -0.27
PDLIM2-204ENST00000397760 ADAMTSL4-AS1Q5T5F5 129 aa13.36□□□□□ -0.27
PDLIM2-204ENST00000397760 Q1RN00 199 aa13.35□□□□□ -0.27
PDLIM2-204ENST00000397760 COPS9Q8WXC6 57 aa13.35□□□□□ -0.27
PDLIM2-204ENST00000397760 TMEM101Q96IK0 257 aa13.35□□□□□ -0.27
PDLIM2-204ENST00000397760 TMEM243Q9BU79 118 aa13.35□□□□□ -0.27
PDLIM2-204ENST00000397760 CARD19Q96LW7 228 aa13.34□□□□□ -0.27
PDLIM2-204ENST00000397760 LINC00242Q5T6M2 205 aa13.34□□□□□ -0.27
PDLIM2-204ENST00000397760 PPDPFQ9H3Y8 114 aa13.34□□□□□ -0.27
PDLIM2-204ENST00000397760 COL7A1Q02388 2944 aa13.34□□□□□ -0.27
PDLIM2-204ENST00000397760 H7C423 109 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms