RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DKK2Q9UBU2 259 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 SPART-AS1P0CW21 52 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 RPL39LQ96EH5 51 aaKnown RBP4.2□□□□□ -1.74
PTPRD-206ENST00000397617 SMKR1H3BMG3 65 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 ATP5EP2Q5VTU8 51 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 UBL5Q9BZL1 73 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 UBE2D4Q9Y2X8 147 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 IGLV4-69A0A075B6H9 119 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 NDUFA1O15239 70 aa4.2□□□□□ -1.74
PTPRD-206ENST00000397617 TMEM223A0PJW6 202 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 TRGV1A0A0A0MS02 117 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 hDV102S1A0JD36 115 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 PLAC8L1A1L4L8 177 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 IBA57-AS1B1ANH7 110 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 PDE6GP18545 87 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 IGKV3-20P01619 116 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 TAX1BP3O14907 124 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 DEFB121Q5J5C9 76 aa4.19□□□□□ -1.74
PTPRD-206ENST00000397617 A0A087WZ39 114 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 COX17Q14061 63 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 DEFB136Q30KP8 78 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 GAGE12HA6NDE8 117 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 PRIMA1Q86XR5 153 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 CDC42SE2Q9NRR3 84 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 TRBV6-8A0A0A6YYG3 113 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 CEND1Q8N111 149 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 XCL2Q9UBD3 114 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 IGHV3OR16-9A0A0B4J2B5 98 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 IGHV4-28A0A0C4DH34 117 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 KNCNA6PVL3 124 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 H3BT86 120 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 MAPK1IP1LQ8NDC0 245 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 UBE2WQ96B02 151 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 IGHV3-30-3P0DP02 117 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 DAD1P61803 113 aa4.18□□□□□ -1.74
PTPRD-206ENST00000397617 A0A087WWL8 130 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 NPC2P61916 151 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 A0A1W2PPM0 123 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 NDUFA12Q9UI09 145 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 TRAV12-2A0A075B6T6 113 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 CELSR1Q9NYQ6 3014 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 MUC21A0A0G2JKD1 596 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 MUC21A0A140T8X8 626 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 IGKV2D-26A0A0A0MRZ7 120 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 NDUFB1O75438 58 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 FUSP35637 526 aaKnown RBP eCLIP4.17□□□□□ -1.74
PTPRD-206ENST00000397617 PCP2Q8IVA1 136 aa4.17□□□□□ -1.74
PTPRD-206ENST00000397617 C15orf53Q8NAA6 179 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 TRAV13-2A0A0B4J235 113 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 LINC00242Q5T6M2 205 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 Q6Q795 121 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 X6R8D5 127 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 TRBV30A0A0K0K1B3 111 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 NDUFC2-KCTD14E9PQ53 114 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 GAS8-AS1O95177 125 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 MIAQ16674 131 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 KPRPQ5T749 579 aaPredicted RBP4.16□□□□□ -1.74
PTPRD-206ENST00000397617 LELP1Q5T871 98 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 Q8IZM0 81 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 A0A0J9YXV3 536 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 FAM240AA0A1B0GVK7 77 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 GAGE2AQ6NT46 116 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 C2orf82Q6UX34 121 aa4.16□□□□□ -1.74
PTPRD-206ENST00000397617 GVQW2A0A096LPI5 108 aaPredicted RBP4.15□□□□□ -1.74
PTPRD-206ENST00000397617 H3BUT2 72 aa4.15□□□□□ -1.74
PTPRD-206ENST00000397617 PRR34Q9NV39 138 aa4.15□□□□□ -1.74
PTPRD-206ENST00000397617 H0YGX0 51 aa4.15□□□□□ -1.74
PTPRD-206ENST00000397617 Q6ZTI0 123 aa4.15□□□□□ -1.74
PTPRD-206ENST00000397617 FHL2Q14192 279 aa4.15□□□□□ -1.75
PTPRD-206ENST00000397617 ANKRD29Q8N6D5 301 aa4.15□□□□□ -1.75
PTPRD-206ENST00000397617 C12orf74Q32Q52 190 aa4.15□□□□□ -1.75
PTPRD-206ENST00000397617 ZNF625Q96I27 306 aaPredicted RBP4.15□□□□□ -1.75
PTPRD-206ENST00000397617 WDFY3Q8IZQ1 3526 aa4.15□□□□□ -1.75
PTPRD-206ENST00000397617 C14orf177Q52M58 125 aa4.15□□□□□ -1.75
PTPRD-206ENST00000397617 CD164L2Q6UWJ8 174 aa4.15□□□□□ -1.75
PTPRD-206ENST00000397617 IGHV3-30P01768 117 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 IGHV3-30-5P0DP03 117 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 C4orf48Q5BLP8 95 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 DSCR8Q96T75 97 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 VPREB1P12018 145 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 Q8NAQ8 132 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 A0A0J9YWU9 116 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 SMIM1B2RUZ4 78 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 IGLL5B9A064 214 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 IGHV4-30-4P0DP06 118 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 UQCRQO14949 82 aa4.14□□□□□ -1.75
PTPRD-206ENST00000397617 HIST1H4AP62805 103 aaKnown RBP4.14□□□□□ -1.75
PTPRD-206ENST00000397617 F5H768 121 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 G3V4G9 280 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 TRBV10-2A0A0K0K1G8 114 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 IGHV3-33P01772 117 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 FXYD2P54710 66 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 MP68P56378 58 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 RPL39P62891 51 aaKnown RBP4.13□□□□□ -1.75
PTPRD-206ENST00000397617 CFC1BP0CG36 223 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 CFC1P0CG37 223 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 TEN1Q86WV5 123 aa4.13□□□□□ -1.75
PTPRD-206ENST00000397617 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms