RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 XCL1P47992 114 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 GAGE2BQ13066 116 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 RHEBQ15382 184 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 C1orf137Q5JT78 98 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 OR10D4PQ8NGN7 298 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 MRAP2Q96G30 205 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 PRO1933Q9H354 126 aa5.68□□□□□ -1.5
NEDD9-203ENST00000397378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-203ENST00000397378 IGKV2-29A2NJV5 120 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-203ENST00000397378 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
NEDD9-203ENST00000397378 GIPP09681 153 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-203ENST00000397378 RAB5AP20339 215 aa5.67□□□□□ -1.5
NEDD9-203ENST00000397378 CAMPP49913 170 aa5.67□□□□□ -1.5
NEDD9-203ENST00000397378 LINC01547P58512 204 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-203ENST00000397378 C9orf116Q5BN46 136 aaPredicted RBP5.67□□□□□ -1.5
NEDD9-203ENST00000397378 GATD1Q8NB37 220 aa5.67□□□□□ -1.5
NEDD9-203ENST00000397378 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 C19orf71A6NCJ1 209 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 H0Y9J4 135 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 APCSP02743 223 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 RPL32P62910 135 aaKnown RBP5.66□□□□□ -1.5
NEDD9-203ENST00000397378 CD164L2Q6UWJ8 174 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 LYZL1Q6UWQ5 148 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 CBLN2Q8IUK8 224 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 NUP35Q8NFH5 326 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 MBD3L1Q8WWY6 194 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 BTF3L4Q96K17 158 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 SPANXCQ9NY87 97 aa5.66□□□□□ -1.5
NEDD9-203ENST00000397378 FXYD6-FXYD2A0A087WZ82 144 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 APOMO95445 188 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 KRTAP1-4P0C5Y4 121 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 BCL2P10415 239 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 SS18Q15532 418 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 PDZD11Q5EBL8 140 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 PHF5AQ7RTV0 110 aaKnown RBP5.65□□□□□ -1.5
NEDD9-203ENST00000397378 HIST3H2BBQ8N257 126 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 C11orf52Q96A22 123 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 TMEM101Q96IK0 257 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 SIGMAR1Q99720 223 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 CNFNQ9BYD5 112 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 CYTL1Q9NRR1 136 aa5.65□□□□□ -1.5
NEDD9-203ENST00000397378 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.64□□□□□ -1.51
NEDD9-203ENST00000397378 M0QXV9 152 aa5.64□□□□□ -1.51
NEDD9-203ENST00000397378 IFNA1P01562 189 aa5.64□□□□□ -1.51
NEDD9-203ENST00000397378 CTRLP40313 264 aa5.64□□□□□ -1.51
NEDD9-203ENST00000397378 MEF2BQ02080 365 aaPredicted RBP5.64□□□□□ -1.51
NEDD9-203ENST00000397378 CENPWQ5EE01 88 aa5.64□□□□□ -1.51
NEDD9-203ENST00000397378 KCNRGQ8N5I3 272 aa5.64□□□□□ -1.51
NEDD9-203ENST00000397378 TSKUQ8WUA8 353 aa5.64□□□□□ -1.51
NEDD9-203ENST00000397378 MIEN1Q9BRT3 115 aa5.64□□□□□ -1.51
NEDD9-203ENST00000397378 TRAV1-1A0A0B4J248 108 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 SDHAF1A6NFY7 115 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 UMAD1C9J7I0 102 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 ESDP10768 282 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 RPL13AP40429 203 aaKnown RBP5.63□□□□□ -1.51
NEDD9-203ENST00000397378 UBE2D1P51668 147 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 SEC61GP60059 68 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 RPL39LQ96EH5 51 aaKnown RBP5.63□□□□□ -1.51
NEDD9-203ENST00000397378 C2orf48Q96LS8 159 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 CAMK2N2Q96S95 79 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 CDC42SE2Q9NRR3 84 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 NAT8Q9UHE5 227 aa5.63□□□□□ -1.51
NEDD9-203ENST00000397378 A0A1B0GV50 99 aa5.62□□□□□ -1.51
NEDD9-203ENST00000397378 I3L3M4 83 aa5.62□□□□□ -1.51
NEDD9-203ENST00000397378 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
NEDD9-203ENST00000397378 TWIST1Q15672 202 aa5.62□□□□□ -1.51
NEDD9-203ENST00000397378 FAM213BQ8TBF2 198 aa5.62□□□□□ -1.51
NEDD9-203ENST00000397378 A0A087WZ39 114 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
NEDD9-203ENST00000397378 G3V3Q6 166 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 COX7A2LO14548 114 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 BCL2L11O43521 198 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 PMCHP20382 165 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 MALP21145 153 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 CCL20P78556 96 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 MAP1LC3CQ9BXW4 147 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 CDIP1Q9H305 208 aa5.61□□□□□ -1.51
NEDD9-203ENST00000397378 TRBV6-5A0A0K0K1A5 114 aa5.6□□□□□ -1.51
NEDD9-203ENST00000397378 TSHBP01222 138 aa5.6□□□□□ -1.51
NEDD9-203ENST00000397378 GNG4P50150 75 aa5.6□□□□□ -1.51
NEDD9-203ENST00000397378 COA6Q5JTJ3 125 aaKnown RBP5.6□□□□□ -1.51
NEDD9-203ENST00000397378 FA2HQ7L5A8 372 aa5.6□□□□□ -1.51
NEDD9-203ENST00000397378 KRTAP11-1Q8IUC1 163 aa5.6□□□□□ -1.51
NEDD9-203ENST00000397378 MANBALQ9NQG1 85 aa5.6□□□□□ -1.51
NEDD9-203ENST00000397378 TRBV20OR9-2A0A075B6H5 130 aa5.59□□□□□ -1.51
NEDD9-203ENST00000397378 OPRPNQ99935 248 aaPredicted RBP5.59□□□□□ -1.51
NEDD9-203ENST00000397378 CSDC2Q9Y534 153 aaKnown RBP5.59□□□□□ -1.51
NEDD9-203ENST00000397378 J3QR89 54 aa5.58□□□□□ -1.52
NEDD9-203ENST00000397378 TLX1NBP0CAT3 122 aa5.58□□□□□ -1.52
NEDD9-203ENST00000397378 FOXA3P55318 350 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-203ENST00000397378 NDUFA6P56556 154 aa5.58□□□□□ -1.52
NEDD9-203ENST00000397378 IMMP2LQ96T52 175 aa5.58□□□□□ -1.52
NEDD9-203ENST00000397378 HIST1H2BLQ99880 126 aa5.58□□□□□ -1.52
NEDD9-203ENST00000397378 TMEM242Q9NWH2 141 aa5.58□□□□□ -1.52
NEDD9-203ENST00000397378 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
NEDD9-203ENST00000397378 GNG13Q9P2W3 67 aa5.58□□□□□ -1.52
NEDD9-203ENST00000397378 FAM168BA1KXE4 195 aa5.57□□□□□ -1.52
NEDD9-203ENST00000397378 C7orf77A4D0Y5 90 aa5.57□□□□□ -1.52
NEDD9-203ENST00000397378 ADCYAP1P18509 176 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms