RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
NUP98-204ENST00000397004 IGKV2-28A0A075B6P5 120 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 INSP01308 110 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 IGKV2D-28P01615 120 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
NUP98-204ENST00000397004 TENM4Q6N022 2769 aa9.85□□□□□ -0.83
NUP98-204ENST00000397004 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
NUP98-204ENST00000397004 PRIMA1Q86XR5 153 aa9.85□□□□□ -0.83
NUP98-204ENST00000397004 LINC00337Q8N6G1 96 aa9.85□□□□□ -0.83
NUP98-204ENST00000397004 C11orf44Q8N8P7 122 aa9.85□□□□□ -0.83
NUP98-204ENST00000397004 PLAC8L1A1L4L8 177 aa9.84□□□□□ -0.83
NUP98-204ENST00000397004 C4orf3Q8WVX3 66 aa9.84□□□□□ -0.83
NUP98-204ENST00000397004 Q9HAA7 133 aa9.84□□□□□ -0.83
NUP98-204ENST00000397004 KHDC1LQ5JSQ8 128 aa9.83□□□□□ -0.84
NUP98-204ENST00000397004 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
NUP98-204ENST00000397004 J3QLI3 93 aa9.83□□□□□ -0.84
NUP98-204ENST00000397004 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
NUP98-204ENST00000397004 CIRBPQ14011 172 aaKnown RBP9.82□□□□□ -0.84
NUP98-204ENST00000397004 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
NUP98-204ENST00000397004 K7EQD1 137 aa9.82□□□□□ -0.84
NUP98-204ENST00000397004 DYNLRB2Q8TF09 96 aa9.81□□□□□ -0.84
NUP98-204ENST00000397004 MEIG1Q5JSS6 88 aa9.81□□□□□ -0.84
NUP98-204ENST00000397004 CCDC168Q8NDH2 2452 aa9.81□□□□□ -0.84
NUP98-204ENST00000397004 BAALC-AS2P0C853 105 aa9.81□□□□□ -0.84
NUP98-204ENST00000397004 NOP10Q9NPE3 64 aaKnown RBP9.81□□□□□ -0.84
NUP98-204ENST00000397004 PEMTQ9UBM1 199 aa9.81□□□□□ -0.84
NUP98-204ENST00000397004 KRTAP1-3Q8IUG1 177 aa9.8□□□□□ -0.84
NUP98-204ENST00000397004 IGLV4-60A0A075B6I1 120 aa9.8□□□□□ -0.84
NUP98-204ENST00000397004 FAM236AA0A1B0GUQ0 79 aa9.8□□□□□ -0.84
NUP98-204ENST00000397004 FAM236BA0A1B0GV22 79 aa9.8□□□□□ -0.84
NUP98-204ENST00000397004 A0A087WYN8 130 aa9.79□□□□□ -0.84
NUP98-204ENST00000397004 ANK3Q12955 4377 aaKnown RBP9.79□□□□□ -0.84
NUP98-204ENST00000397004 A0A1W2PRX2 142 aa9.79□□□□□ -0.84
NUP98-204ENST00000397004 LRRC75A-AS1Q8N1F1 130 aa9.78□□□□□ -0.84
NUP98-204ENST00000397004 MIR7-3HGQ8N6C7 128 aa9.78□□□□□ -0.84
NUP98-204ENST00000397004 GCN1Q92616 2671 aaKnown RBP9.78□□□□□ -0.84
NUP98-204ENST00000397004 VWFP04275 2813 aa9.78□□□□□ -0.84
NUP98-204ENST00000397004 FLNAP21333 2647 aaKnown RBP9.78□□□□□ -0.84
NUP98-204ENST00000397004 TRACP01848 142 aa9.78□□□□□ -0.84
NUP98-204ENST00000397004 RPL36AP83881 106 aaKnown RBP9.78□□□□□ -0.84
NUP98-204ENST00000397004 RPL36ALQ969Q0 106 aaKnown RBP9.78□□□□□ -0.84
NUP98-204ENST00000397004 FN1P02751 2386 aaKnown RBP9.78□□□□□ -0.84
NUP98-204ENST00000397004 STHQ8IWL8 128 aa9.77□□□□□ -0.84
NUP98-204ENST00000397004 DEFB113Q30KQ7 82 aa9.77□□□□□ -0.85
NUP98-204ENST00000397004 SMIM20Q8N5G0 67 aa9.77□□□□□ -0.85
NUP98-204ENST00000397004 TRBV10-1A0A0K0K1A3 114 aa9.76□□□□□ -0.85
NUP98-204ENST00000397004 HIST2H2BCQ6DN03 193 aa9.76□□□□□ -0.85
NUP98-204ENST00000397004 IGKV3OR2-268A0A0C4DH90 116 aa9.76□□□□□ -0.85
NUP98-204ENST00000397004 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
NUP98-204ENST00000397004 SMIM11BQ8TCY0 68 aa9.76□□□□□ -0.85
NUP98-204ENST00000397004 CCL18P55774 89 aa9.75□□□□□ -0.85
NUP98-204ENST00000397004 IGHV3OR16-9A0A0B4J2B5 98 aa9.74□□□□□ -0.85
NUP98-204ENST00000397004 ATP5G1P05496 136 aa9.74□□□□□ -0.85
NUP98-204ENST00000397004 ESM1Q9NQ30 184 aa9.74□□□□□ -0.85
NUP98-204ENST00000397004 ACANP16112 2415 aa9.74□□□□□ -0.85
NUP98-204ENST00000397004 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
NUP98-204ENST00000397004 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
NUP98-204ENST00000397004 MTORP42345 2549 aa9.74□□□□□ -0.85
NUP98-204ENST00000397004 HERV-K104P63124 156 aa9.73□□□□□ -0.85
NUP98-204ENST00000397004 SND1-IT1Q9HBX3 110 aa9.73□□□□□ -0.85
NUP98-204ENST00000397004 C19orf73Q9NVV2 129 aa9.73□□□□□ -0.85
NUP98-204ENST00000397004 PDZD2O15018 2839 aa9.73□□□□□ -0.85
NUP98-204ENST00000397004 MALP21145 153 aa9.73□□□□□ -0.85
NUP98-204ENST00000397004 C5orf38Q86SI9 138 aa9.73□□□□□ -0.85
NUP98-204ENST00000397004 CSNK1G2-AS1Q8NCQ2 148 aa9.73□□□□□ -0.85
NUP98-204ENST00000397004 TMEM243Q9BU79 118 aa9.73□□□□□ -0.85
NUP98-204ENST00000397004 ACYP1P07311 99 aa9.72□□□□□ -0.85
NUP98-204ENST00000397004 LINC00643Q86TS7 51 aa9.72□□□□□ -0.85
NUP98-204ENST00000397004 FAM222AQ5U5X8 452 aa9.72□□□□□ -0.85
NUP98-204ENST00000397004 CYSTM1Q9H1C7 97 aa9.72□□□□□ -0.85
NUP98-204ENST00000397004 SS18Q15532 418 aa9.72□□□□□ -0.85
NUP98-204ENST00000397004 GAGE2AQ6NT46 116 aa9.71□□□□□ -0.85
NUP98-204ENST00000397004 CCL24O00175 119 aa9.71□□□□□ -0.86
NUP98-204ENST00000397004 IMUPQ9GZP8 106 aa9.71□□□□□ -0.86
NUP98-204ENST00000397004 PPDPFQ9H3Y8 114 aa9.71□□□□□ -0.86
NUP98-204ENST00000397004 SLPIP03973 132 aa9.7□□□□□ -0.86
NUP98-204ENST00000397004 C14orf132Q9NPU4 83 aa9.7□□□□□ -0.86
NUP98-204ENST00000397004 RPL35AP18077 110 aaKnown RBP9.7□□□□□ -0.86
NUP98-204ENST00000397004 C2orf48Q96LS8 159 aa9.7□□□□□ -0.86
NUP98-204ENST00000397004 FAM110AQ9BQ89 295 aa9.7□□□□□ -0.86
NUP98-204ENST00000397004 PFN2P35080 140 aa9.69□□□□□ -0.86
NUP98-204ENST00000397004 FHL2Q14192 279 aa9.69□□□□□ -0.86
NUP98-204ENST00000397004 KLK5Q9Y337 293 aaPredicted RBP9.69□□□□□ -0.86
NUP98-204ENST00000397004 OBSCN-AS1Q96MR7 158 aa9.69□□□□□ -0.86
NUP98-204ENST00000397004 J3QKU1 62 aa9.69□□□□□ -0.86
NUP98-204ENST00000397004 UBE2L6O14933 153 aa9.69□□□□□ -0.86
NUP98-204ENST00000397004 TRAV13-2A0A0B4J235 113 aa9.68□□□□□ -0.86
NUP98-204ENST00000397004 LINC00158P58513 81 aa9.68□□□□□ -0.86
NUP98-204ENST00000397004 TRGV2A0A075B6R0 118 aa9.68□□□□□ -0.86
NUP98-204ENST00000397004 CRPP02741 224 aa9.68□□□□□ -0.86
NUP98-204ENST00000397004 PRR3P79522 188 aaKnown RBP9.68□□□□□ -0.86
NUP98-204ENST00000397004 TRBV6-8A0A0A6YYG3 113 aa9.68□□□□□ -0.86
NUP98-204ENST00000397004 DNAJC9-AS1A6NH13 148 aa9.68□□□□□ -0.86
NUP98-204ENST00000397004 LINC00846Q9NV44 126 aa9.68□□□□□ -0.86
NUP98-204ENST00000397004 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
NUP98-204ENST00000397004 C11orf68Q9H3H3 251 aaKnown RBP9.67□□□□□ -0.86
NUP98-204ENST00000397004 TRAV25A0A0B4J276 109 aa9.67□□□□□ -0.86
NUP98-204ENST00000397004 TRBV6-4A0A1B0GX49 114 aa9.67□□□□□ -0.86
NUP98-204ENST00000397004 NCR3O14931 201 aa9.67□□□□□ -0.86
NUP98-204ENST00000397004 A0A087WZ39 114 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms