RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 SPART-AS1P0CW21 52 aa12.06□□□□□ -0.48
SCNN1A-205ENST00000396966 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
SCNN1A-205ENST00000396966 TCL1BO95988 128 aa12.05□□□□□ -0.48
SCNN1A-205ENST00000396966 SCGB1C2P0DMR2 95 aa12.05□□□□□ -0.48
SCNN1A-205ENST00000396966 NDUFA12Q9UI09 145 aa12.05□□□□□ -0.48
SCNN1A-205ENST00000396966 PRSS2P07478 247 aa12.05□□□□□ -0.48
SCNN1A-205ENST00000396966 SMCPP49901 116 aaPredicted RBP12.05□□□□□ -0.48
SCNN1A-205ENST00000396966 MAST4O15021 2626 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 UBE2L6O14933 153 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 LINC00694P0DN24 101 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 TMEM243Q9BU79 118 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 GYPEP15421 78 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 ADAMTSL4-AS1Q5T5F5 129 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 LYRM7Q5U5X0 104 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 SBSPONQ8IVN8 264 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 LITAFQ99732 161 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
SCNN1A-205ENST00000396966 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
SCNN1A-205ENST00000396966 H7C423 109 aa12.03□□□□□ -0.48
SCNN1A-205ENST00000396966 J3QR89 54 aa12.03□□□□□ -0.48
SCNN1A-205ENST00000396966 ATP5G1P05496 136 aa12.03□□□□□ -0.48
SCNN1A-205ENST00000396966 CSDC2Q9Y534 153 aaKnown RBP12.03□□□□□ -0.48
SCNN1A-205ENST00000396966 PAX4O43316 350 aa12.02□□□□□ -0.49
SCNN1A-205ENST00000396966 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
SCNN1A-205ENST00000396966 COX6A2Q02221 97 aa12.02□□□□□ -0.49
SCNN1A-205ENST00000396966 ERG28Q9UKR5 140 aa12.02□□□□□ -0.49
SCNN1A-205ENST00000396966 CMYA5Q8N3K9 4069 aa12.01□□□□□ -0.49
SCNN1A-205ENST00000396966 NBEAL2Q6ZNJ1 2754 aa12.01□□□□□ -0.49
SCNN1A-205ENST00000396966 NPC2P61916 151 aa12.01□□□□□ -0.49
SCNN1A-205ENST00000396966 ATP6V0E2Q8NHE4 81 aa12.01□□□□□ -0.49
SCNN1A-205ENST00000396966 TRBV20-1A0A075B6N2 111 aa12□□□□□ -0.49
SCNN1A-205ENST00000396966 TRBV6-8A0A0A6YYG3 113 aa12□□□□□ -0.49
SCNN1A-205ENST00000396966 A0A0B4J2C4 111 aa12□□□□□ -0.49
SCNN1A-205ENST00000396966 TMEM101Q96IK0 257 aa12□□□□□ -0.49
SCNN1A-205ENST00000396966 TRAV16A0A0A6YYK6 109 aaPredicted RBP12□□□□□ -0.49
SCNN1A-205ENST00000396966 Q1RN00 199 aa11.99□□□□□ -0.49
SCNN1A-205ENST00000396966 RETNQ9HD89 108 aa11.99□□□□□ -0.49
SCNN1A-205ENST00000396966 COL6A5A8TX70 2615 aa11.98□□□□□ -0.49
SCNN1A-205ENST00000396966 TIRAPP58753 221 aa11.98□□□□□ -0.49
SCNN1A-205ENST00000396966 ZFAND6Q6FIF0 208 aa11.98□□□□□ -0.49
SCNN1A-205ENST00000396966 TRAV13-1A0A0B4J241 112 aa11.98□□□□□ -0.49
SCNN1A-205ENST00000396966 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
SCNN1A-205ENST00000396966 GAGE12HA6NDE8 117 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 F5H768 121 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 FOXI1Q12951 378 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 IGLV5-45A0A087WSX0 123 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 MIAQ16674 131 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 DAND5Q8N907 189 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 CHCHD5Q9BSY4 110 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 SPANXDQ9BXN6 97 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 CDC42SE2Q9NRR3 84 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 SPANXCQ9NY87 97 aa11.97□□□□□ -0.49
SCNN1A-205ENST00000396966 PKD1L1Q8TDX9 2849 aa11.96□□□□□ -0.49
SCNN1A-205ENST00000396966 GAGE6Q13070 117 aa11.95□□□□□ -0.5
SCNN1A-205ENST00000396966 HTN3P15516 51 aa11.95□□□□□ -0.5
SCNN1A-205ENST00000396966 HERVK_113P63121 156 aa11.95□□□□□ -0.5
SCNN1A-205ENST00000396966 TRAV26-1A0A087WT03 109 aa11.94□□□□□ -0.5
SCNN1A-205ENST00000396966 C11orf68Q9H3H3 251 aaKnown RBP11.94□□□□□ -0.5
SCNN1A-205ENST00000396966 ZNF625Q96I27 306 aaPredicted RBP11.93□□□□□ -0.5
SCNN1A-205ENST00000396966 SIGMAR1Q99720 223 aa11.93□□□□□ -0.5
SCNN1A-205ENST00000396966 A0A096LPF7 62 aa11.93□□□□□ -0.5
SCNN1A-205ENST00000396966 NDUFA1O15239 70 aa11.93□□□□□ -0.5
SCNN1A-205ENST00000396966 MDFIQ99750 246 aa11.93□□□□□ -0.5
SCNN1A-205ENST00000396966 C9JAW5 83 aa11.92□□□□□ -0.5
SCNN1A-205ENST00000396966 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
SCNN1A-205ENST00000396966 Q9H8V8 135 aa11.92□□□□□ -0.5
SCNN1A-205ENST00000396966 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
SCNN1A-205ENST00000396966 TRIAP1O43715 76 aa11.92□□□□□ -0.5
SCNN1A-205ENST00000396966 MRPL23Q16540 153 aaKnown RBP11.92□□□□□ -0.5
SCNN1A-205ENST00000396966 TEN1Q86WV5 123 aa11.92□□□□□ -0.5
SCNN1A-205ENST00000396966 SPATA25Q9BR10 227 aa11.92□□□□□ -0.5
SCNN1A-205ENST00000396966 IGLV5-39A0A0G2JS06 123 aa11.91□□□□□ -0.5
SCNN1A-205ENST00000396966 CARD19Q96LW7 228 aa11.91□□□□□ -0.5
SCNN1A-205ENST00000396966 SMIM1B2RUZ4 78 aa11.91□□□□□ -0.5
SCNN1A-205ENST00000396966 ICOSQ9Y6W8 199 aa11.91□□□□□ -0.5
SCNN1A-205ENST00000396966 SLC25A20O43772 301 aa11.9□□□□□ -0.5
SCNN1A-205ENST00000396966 PRB2P02812 416 aaPredicted RBP11.9□□□□□ -0.5
SCNN1A-205ENST00000396966 TIMM17BO60830 172 aa11.89□□□□□ -0.51
SCNN1A-205ENST00000396966 ANKRD29Q8N6D5 301 aa11.89□□□□□ -0.51
SCNN1A-205ENST00000396966 TRBV30A0A0K0K1B3 111 aa11.89□□□□□ -0.51
SCNN1A-205ENST00000396966 TMEM262E9PQX1 116 aa11.89□□□□□ -0.51
SCNN1A-205ENST00000396966 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
SCNN1A-205ENST00000396966 PPDPFLQ8WWR9 84 aa11.89□□□□□ -0.51
SCNN1A-205ENST00000396966 DNAH3Q8TD57 4116 aa11.89□□□□□ -0.51
SCNN1A-205ENST00000396966 IGLV4-60A0A075B6I1 120 aa11.88□□□□□ -0.51
SCNN1A-205ENST00000396966 ATXN8Q156A1 80 aa11.88□□□□□ -0.51
SCNN1A-205ENST00000396966 DEFB121Q5J5C9 76 aa11.88□□□□□ -0.51
SCNN1A-205ENST00000396966 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
SCNN1A-205ENST00000396966 A0A0J9YWU9 116 aa11.87□□□□□ -0.51
SCNN1A-205ENST00000396966 K7EIL1 84 aa11.87□□□□□ -0.51
SCNN1A-205ENST00000396966 A0A1B0GUV1 79 aa11.87□□□□□ -0.51
SCNN1A-205ENST00000396966 IFITM1P13164 125 aa11.87□□□□□ -0.51
SCNN1A-205ENST00000396966 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
SCNN1A-205ENST00000396966 ANK2Q01484 3957 aa11.86□□□□□ -0.51
SCNN1A-205ENST00000396966 LINC01620Q4KN68 170 aa11.86□□□□□ -0.51
SCNN1A-205ENST00000396966 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
SCNN1A-205ENST00000396966 RPL13AP40429 203 aaKnown RBP11.85□□□□□ -0.51
SCNN1A-205ENST00000396966 Q6ZTC4 211 aa11.85□□□□□ -0.51
SCNN1A-205ENST00000396966 H3BNG1 76 aa11.84□□□□□ -0.51
SCNN1A-205ENST00000396966 MEIG1Q5JSS6 88 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms