RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 ORAOV1Q8WV07 137 aa4.92□□□□□ -1.62
SCFD1-202ENST00000396629 GNG13Q9P2W3 67 aa4.92□□□□□ -1.62
SCFD1-202ENST00000396629 GAGE2DQ9UEU5 116 aa4.92□□□□□ -1.62
SCFD1-202ENST00000396629 RETNLBQ9BQ08 111 aa4.91□□□□□ -1.62
SCFD1-202ENST00000396629 NUPR1O60356 82 aa4.9□□□□□ -1.62
SCFD1-202ENST00000396629 CRYGAP11844 174 aa4.9□□□□□ -1.62
SCFD1-202ENST00000396629 IGHV3OR16-9A0A0B4J2B5 98 aa4.9□□□□□ -1.63
SCFD1-202ENST00000396629 PDE6DO43924 150 aa4.9□□□□□ -1.63
SCFD1-202ENST00000396629 Q6ZUT4 128 aa4.9□□□□□ -1.63
SCFD1-202ENST00000396629 TIMM21Q9BVV7 248 aa4.9□□□□□ -1.63
SCFD1-202ENST00000396629 LINC01547P58512 204 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-202ENST00000396629 C9orf129Q5T035 196 aaKnown RBP4.89□□□□□ -1.63
SCFD1-202ENST00000396629 MED9Q9NWA0 146 aa4.89□□□□□ -1.63
SCFD1-202ENST00000396629 IGLV7-46A0A075B6I9 117 aa4.89□□□□□ -1.63
SCFD1-202ENST00000396629 K7EN84 100 aa4.89□□□□□ -1.63
SCFD1-202ENST00000396629 VCYO14598 125 aa4.89□□□□□ -1.63
SCFD1-202ENST00000396629 ZNF345Q14585 488 aa4.89□□□□□ -1.63
SCFD1-202ENST00000396629 KIAA0087Q14695 138 aa4.89□□□□□ -1.63
SCFD1-202ENST00000396629 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
SCFD1-202ENST00000396629 FCER1GP30273 86 aa4.88□□□□□ -1.63
SCFD1-202ENST00000396629 KRTAP13-2Q52LG2 175 aa4.88□□□□□ -1.63
SCFD1-202ENST00000396629 OCC1Q8TAD7 63 aa4.88□□□□□ -1.63
SCFD1-202ENST00000396629 FAM104AQ969W3 186 aa4.88□□□□□ -1.63
SCFD1-202ENST00000396629 CTDSP1Q9GZU7 261 aa4.88□□□□□ -1.63
SCFD1-202ENST00000396629 TMEM191AQ9H0A3 160 aa4.88□□□□□ -1.63
SCFD1-202ENST00000396629 TRBV30A0A0K0K1B3 111 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 NDUFC2-KCTD14E9PQ53 114 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 RAB4AP20338 218 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 CTAG1AP78358 180 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 LINC00173Q6ZV60 143 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 RPL28P46779 137 aaKnown RBP4.87□□□□□ -1.63
SCFD1-202ENST00000396629 LINC00304Q8N9R0 145 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 TMEM18Q96B42 140 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 C22orf24Q9Y442 160 aa4.87□□□□□ -1.63
SCFD1-202ENST00000396629 A8MWL6 223 aa4.86□□□□□ -1.63
SCFD1-202ENST00000396629 GATCO43716 136 aaKnown RBP4.86□□□□□ -1.63
SCFD1-202ENST00000396629 LINC00242Q5T6M2 205 aa4.86□□□□□ -1.63
SCFD1-202ENST00000396629 LBHQ53QV2 105 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-202ENST00000396629 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 NRACQ8N912 160 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 KIR2DL4Q99706 377 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 ANAPC11Q9NYG5 84 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 SMKR1H3BMG3 65 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 SMLR1H3BR10 107 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 TEX46H3BTG2 121 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 BCE1O60756 84 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 SUMO2P61956 95 aaKnown RBP4.85□□□□□ -1.63
SCFD1-202ENST00000396629 FAM231DQ6ZW35 169 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 AMN1Q8IY45 258 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 PPDPFQ9H3Y8 114 aa4.85□□□□□ -1.63
SCFD1-202ENST00000396629 KANTRA0A1W2PQU2 76 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 HMSDA8MTL9 139 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 PPP1R17O96001 155 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 MRPS36P82909 103 aaKnown RBP4.84□□□□□ -1.63
SCFD1-202ENST00000396629 SRSF3P84103 164 aaKnown RBP4.84□□□□□ -1.63
SCFD1-202ENST00000396629 ASB16-AS1Q495Z4 193 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 FAM229BQ4G0N7 80 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 CT83Q5H943 113 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 C2orf82Q6UX34 121 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 BORCS7Q96B45 105 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 PACRGQ96M98 296 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-202ENST00000396629 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.63
SCFD1-202ENST00000396629 A0A1B0GUT8 65 aa4.84□□□□□ -1.64
SCFD1-202ENST00000396629 PPP1R2P9O14990 202 aa4.84□□□□□ -1.64
SCFD1-202ENST00000396629 RPL39P62891 51 aaKnown RBP4.84□□□□□ -1.64
SCFD1-202ENST00000396629 TP73-AS1Q9UF72 201 aa4.84□□□□□ -1.64
SCFD1-202ENST00000396629 TGIF2-C20orf24A0A0A6YYL0 155 aa4.83□□□□□ -1.64
SCFD1-202ENST00000396629 ZNF727A8MUV8 499 aa4.83□□□□□ -1.64
SCFD1-202ENST00000396629 HBBP68871 147 aa4.83□□□□□ -1.64
SCFD1-202ENST00000396629 SPANXA1Q9NS26 97 aa4.83□□□□□ -1.64
SCFD1-202ENST00000396629 IFITM10A6NMD0 228 aa4.82□□□□□ -1.64
SCFD1-202ENST00000396629 TAGLN2P37802 199 aaKnown RBP4.82□□□□□ -1.64
SCFD1-202ENST00000396629 RPL32P62910 135 aaKnown RBP4.82□□□□□ -1.64
SCFD1-202ENST00000396629 HIGD1CA8MV81 97 aa4.82□□□□□ -1.64
SCFD1-202ENST00000396629 TCAPO15273 167 aa4.82□□□□□ -1.64
SCFD1-202ENST00000396629 MRPL55Q7Z7F7 128 aaKnown RBP4.82□□□□□ -1.64
SCFD1-202ENST00000396629 KRTAP13-1Q8IUC0 172 aa4.82□□□□□ -1.64
SCFD1-202ENST00000396629 LINC01561Q8N1V8 128 aa4.82□□□□□ -1.64
SCFD1-202ENST00000396629 LINC00469Q8N7U9 141 aa4.82□□□□□ -1.64
SCFD1-202ENST00000396629 C20orf78Q9BR46 151 aa4.81□□□□□ -1.64
SCFD1-202ENST00000396629 TRBV24-1A0A075B6N3 115 aa4.8□□□□□ -1.64
SCFD1-202ENST00000396629 IGKV2D-26A0A0A0MRZ7 120 aa4.8□□□□□ -1.64
SCFD1-202ENST00000396629 RIGQ13278 110 aa4.8□□□□□ -1.64
SCFD1-202ENST00000396629 MRPL51Q4U2R6 128 aaKnown RBP4.8□□□□□ -1.64
SCFD1-202ENST00000396629 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-202ENST00000396629 LINC00167Q96N53 147 aa4.8□□□□□ -1.64
SCFD1-202ENST00000396629 XAGE1AQ9HD64 81 aa4.8□□□□□ -1.64
SCFD1-202ENST00000396629 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
SCFD1-202ENST00000396629 LINC00337Q8N6G1 96 aa4.79□□□□□ -1.64
SCFD1-202ENST00000396629 LINC00862A6NCI5 91 aa4.79□□□□□ -1.64
SCFD1-202ENST00000396629 FAM104BQ5XKR9 115 aa4.79□□□□□ -1.64
SCFD1-202ENST00000396629 RPL37AP8A6NKH3 93 aa4.78□□□□□ -1.64
SCFD1-202ENST00000396629 TMEM250H0YL14 139 aa4.78□□□□□ -1.64
SCFD1-202ENST00000396629 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
SCFD1-202ENST00000396629 SMIM2Q9BVW6 85 aa4.78□□□□□ -1.64
SCFD1-202ENST00000396629 PYGO1Q9Y3Y4 419 aa4.78□□□□□ -1.64
SCFD1-202ENST00000396629 IGLV4-3A0A075B6K6 122 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 UBE2AP49459 152 aa4.77□□□□□ -1.65
SCFD1-202ENST00000396629 OSTCQ9NRP0 149 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms