RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 TIRAPP58753 221 aa8.53□□□□□ -1.04
ITGB1-202ENST00000396033 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
ITGB1-202ENST00000396033 GAGE6Q13070 117 aa8.53□□□□□ -1.04
ITGB1-202ENST00000396033 CDKN2A-AS1Q9UH64 79 aa8.53□□□□□ -1.04
ITGB1-202ENST00000396033 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.04
ITGB1-202ENST00000396033 H7C423 109 aa8.52□□□□□ -1.04
ITGB1-202ENST00000396033 VSIG2Q96IQ7 327 aa8.52□□□□□ -1.04
ITGB1-202ENST00000396033 A6NJY4 79 aa8.52□□□□□ -1.05
ITGB1-202ENST00000396033 HERVK_113P63121 156 aa8.52□□□□□ -1.05
ITGB1-202ENST00000396033 PRO0255Q9UI72 69 aa8.52□□□□□ -1.05
ITGB1-202ENST00000396033 MIFP14174 115 aa8.52□□□□□ -1.05
ITGB1-202ENST00000396033 CHCHD5Q9BSY4 110 aa8.52□□□□□ -1.05
ITGB1-202ENST00000396033 IGLV5-45A0A087WSX0 123 aa8.51□□□□□ -1.05
ITGB1-202ENST00000396033 COX6A2Q02221 97 aa8.51□□□□□ -1.05
ITGB1-202ENST00000396033 LINC00242Q5T6M2 205 aa8.51□□□□□ -1.05
ITGB1-202ENST00000396033 Q8NAQ8 132 aa8.51□□□□□ -1.05
ITGB1-202ENST00000396033 DAD1P61803 113 aa8.51□□□□□ -1.05
ITGB1-202ENST00000396033 C10orf126Q8N4M7 172 aa8.51□□□□□ -1.05
ITGB1-202ENST00000396033 ATP6V0E2Q8NHE4 81 aa8.51□□□□□ -1.05
ITGB1-202ENST00000396033 A8MZ25 164 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 TCL1BO95988 128 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 CELA1Q9UNI1 258 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 PAX4O43316 350 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 IGHV3-30P01768 117 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 IGHV3-30-5P0DP03 117 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 KRTAP10-11P60412 298 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
ITGB1-202ENST00000396033 BAHCC1Q9P281 2608 aa8.49□□□□□ -1.05
ITGB1-202ENST00000396033 A0A0J9YXY3 114 aa8.49□□□□□ -1.05
ITGB1-202ENST00000396033 CYSRT1A8MQ03 144 aa8.49□□□□□ -1.05
ITGB1-202ENST00000396033 FBN1P35555 2871 aaKnown RBP8.49□□□□□ -1.05
ITGB1-202ENST00000396033 A0A096LPF7 62 aa8.48□□□□□ -1.05
ITGB1-202ENST00000396033 PRIMA1Q86XR5 153 aa8.48□□□□□ -1.05
ITGB1-202ENST00000396033 STAB1Q9NY15 2570 aa8.48□□□□□ -1.05
ITGB1-202ENST00000396033 ZFAND6Q6FIF0 208 aa8.48□□□□□ -1.05
ITGB1-202ENST00000396033 IGLV4-60A0A075B6I1 120 aa8.47□□□□□ -1.05
ITGB1-202ENST00000396033 IGKV3OR2-268A0A0C4DH90 116 aa8.47□□□□□ -1.05
ITGB1-202ENST00000396033 B5MCH6 92 aa8.47□□□□□ -1.05
ITGB1-202ENST00000396033 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
ITGB1-202ENST00000396033 SPART-AS1P0CW21 52 aa8.47□□□□□ -1.05
ITGB1-202ENST00000396033 ATP5G1P05496 136 aa8.47□□□□□ -1.05
ITGB1-202ENST00000396033 CMYA5Q8N3K9 4069 aa8.47□□□□□ -1.05
ITGB1-202ENST00000396033 PSMB2P49721 201 aa8.46□□□□□ -1.05
ITGB1-202ENST00000396033 ANKRD29Q8N6D5 301 aa8.46□□□□□ -1.06
ITGB1-202ENST00000396033 MAST4O15021 2626 aa8.46□□□□□ -1.06
ITGB1-202ENST00000396033 IGLV5-39A0A0G2JS06 123 aa8.46□□□□□ -1.06
ITGB1-202ENST00000396033 SMIM1B2RUZ4 78 aa8.46□□□□□ -1.06
ITGB1-202ENST00000396033 EGFEM1PQ0D2K5 195 aa8.46□□□□□ -1.06
ITGB1-202ENST00000396033 F5H768 121 aa8.45□□□□□ -1.06
ITGB1-202ENST00000396033 J3QR89 54 aa8.45□□□□□ -1.06
ITGB1-202ENST00000396033 HTN3P15516 51 aa8.45□□□□□ -1.06
ITGB1-202ENST00000396033 TMEM262E9PQX1 116 aa8.45□□□□□ -1.06
ITGB1-202ENST00000396033 CFC1BP0CG36 223 aa8.45□□□□□ -1.06
ITGB1-202ENST00000396033 CFC1P0CG37 223 aa8.45□□□□□ -1.06
ITGB1-202ENST00000396033 NDUFA1O15239 70 aa8.44□□□□□ -1.06
ITGB1-202ENST00000396033 TEN1Q86WV5 123 aa8.44□□□□□ -1.06
ITGB1-202ENST00000396033 MUSTN1Q8IVN3 82 aa8.44□□□□□ -1.06
ITGB1-202ENST00000396033 LITAFQ99732 161 aa8.44□□□□□ -1.06
ITGB1-202ENST00000396033 RETNQ9HD89 108 aa8.44□□□□□ -1.06
ITGB1-202ENST00000396033 TRBV20-1A0A075B6N2 111 aa8.43□□□□□ -1.06
ITGB1-202ENST00000396033 A4D1N5 150 aa8.43□□□□□ -1.06
ITGB1-202ENST00000396033 Q9H8V8 135 aa8.43□□□□□ -1.06
ITGB1-202ENST00000396033 PRSS2P07478 247 aa8.42□□□□□ -1.06
ITGB1-202ENST00000396033 ADAMTSL4-AS1Q5T5F5 129 aa8.42□□□□□ -1.06
ITGB1-202ENST00000396033 CFAP161Q6P656 301 aa8.42□□□□□ -1.06
ITGB1-202ENST00000396033 SPANXDQ9BXN6 97 aa8.42□□□□□ -1.06
ITGB1-202ENST00000396033 SPANXCQ9NY87 97 aa8.42□□□□□ -1.06
ITGB1-202ENST00000396033 LOC107984156A0A0G2JMH3 177 aa8.42□□□□□ -1.06
ITGB1-202ENST00000396033 ARL17AQ8IVW1 177 aa8.42□□□□□ -1.06
ITGB1-202ENST00000396033 ANAPC13Q9BS18 74 aa8.42□□□□□ -1.06
ITGB1-202ENST00000396033 MIAQ16674 131 aa8.41□□□□□ -1.06
ITGB1-202ENST00000396033 PKD1L1Q8TDX9 2849 aa8.41□□□□□ -1.06
ITGB1-202ENST00000396033 A0A1B0GUV1 79 aa8.41□□□□□ -1.06
ITGB1-202ENST00000396033 TIMM17BO60830 172 aa8.41□□□□□ -1.06
ITGB1-202ENST00000396033 HERV-K104P63124 156 aa8.41□□□□□ -1.06
ITGB1-202ENST00000396033 PPDPFLQ8WWR9 84 aa8.41□□□□□ -1.06
ITGB1-202ENST00000396033 NPC2P61916 151 aa8.4□□□□□ -1.06
ITGB1-202ENST00000396033 ZNF625Q96I27 306 aaPredicted RBP8.4□□□□□ -1.06
ITGB1-202ENST00000396033 MRPL23Q16540 153 aaKnown RBP8.4□□□□□ -1.06
ITGB1-202ENST00000396033 PRO1854Q9UHT4 67 aa8.4□□□□□ -1.06
ITGB1-202ENST00000396033 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.4□□□□□ -1.07
ITGB1-202ENST00000396033 LINC00959A0A1B0GUT2 108 aa8.4□□□□□ -1.07
ITGB1-202ENST00000396033 CIRBPQ14011 172 aaKnown RBP8.4□□□□□ -1.07
ITGB1-202ENST00000396033 CLPSL2Q6UWE3 100 aa8.4□□□□□ -1.07
ITGB1-202ENST00000396033 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.07
ITGB1-202ENST00000396033 ANK2Q01484 3957 aa8.4□□□□□ -1.07
ITGB1-202ENST00000396033 NDUFV3P56181 108 aaKnown RBP8.39□□□□□ -1.07
ITGB1-202ENST00000396033 DAND5Q8N907 189 aa8.39□□□□□ -1.07
ITGB1-202ENST00000396033 IGHV3OR16-9A0A0B4J2B5 98 aa8.39□□□□□ -1.07
ITGB1-202ENST00000396033 A0A0B4J2C4 111 aa8.39□□□□□ -1.07
ITGB1-202ENST00000396033 DNAH3Q8TD57 4116 aa8.38□□□□□ -1.07
ITGB1-202ENST00000396033 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
ITGB1-202ENST00000396033 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
ITGB1-202ENST00000396033 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
ITGB1-202ENST00000396033 COL6A5A8TX70 2615 aa8.38□□□□□ -1.07
ITGB1-202ENST00000396033 SS18Q15532 418 aa8.38□□□□□ -1.07
ITGB1-202ENST00000396033 C5orf38Q86SI9 138 aa8.38□□□□□ -1.07
ITGB1-202ENST00000396033 A0A0U1RRA0 63 aa8.37□□□□□ -1.07
ITGB1-202ENST00000396033 XCL1P47992 114 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms