RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 IGHV3-30-3P0DP02 117 aa13.3□□□□□ -0.28
LMNB1-202ENST00000395354 SCGB1D4Q6XE38 83 aa13.3□□□□□ -0.28
LMNB1-202ENST00000395354 MUC7Q8TAX7 377 aa13.3□□□□□ -0.28
LMNB1-202ENST00000395354 CDKN2A-AS1Q9UH64 79 aa13.3□□□□□ -0.28
LMNB1-202ENST00000395354 A0A096LPF7 62 aa13.29□□□□□ -0.28
LMNB1-202ENST00000395354 A6NDN8 102 aa13.29□□□□□ -0.28
LMNB1-202ENST00000395354 COX6A2Q02221 97 aa13.29□□□□□ -0.28
LMNB1-202ENST00000395354 TM2D2Q9BX73 214 aa13.29□□□□□ -0.28
LMNB1-202ENST00000395354 CEND1Q8N111 149 aa13.28□□□□□ -0.28
LMNB1-202ENST00000395354 IGHV3-64A0A075B6Q5 118 aa13.27□□□□□ -0.29
LMNB1-202ENST00000395354 TMEM262E9PQX1 116 aa13.27□□□□□ -0.29
LMNB1-202ENST00000395354 RBX1P62877 108 aa13.27□□□□□ -0.29
LMNB1-202ENST00000395354 LELP1Q5T871 98 aa13.27□□□□□ -0.29
LMNB1-202ENST00000395354 HIST1H4GQ99525 98 aa13.27□□□□□ -0.29
LMNB1-202ENST00000395354 TRAV8-3A0A0A6YYJ7 113 aa13.26□□□□□ -0.29
LMNB1-202ENST00000395354 NUPR2A6NF83 97 aa13.26□□□□□ -0.29
LMNB1-202ENST00000395354 SPINK8P0C7L1 97 aa13.26□□□□□ -0.29
LMNB1-202ENST00000395354 GCSHP23434 173 aa13.26□□□□□ -0.29
LMNB1-202ENST00000395354 ZFAND6Q6FIF0 208 aa13.26□□□□□ -0.29
LMNB1-202ENST00000395354 SPANXB1Q9NS25 103 aaPredicted RBP13.26□□□□□ -0.29
LMNB1-202ENST00000395354 IGLV5-39A0A0G2JS06 123 aa13.25□□□□□ -0.29
LMNB1-202ENST00000395354 IGLL5B9A064 214 aa13.24□□□□□ -0.29
LMNB1-202ENST00000395354 CCL25O15444 150 aa13.24□□□□□ -0.29
LMNB1-202ENST00000395354 KLK5Q9Y337 293 aaPredicted RBP13.24□□□□□ -0.29
LMNB1-202ENST00000395354 LINC00959A0A1B0GUT2 108 aa13.22□□□□□ -0.29
LMNB1-202ENST00000395354 SMIM1B2RUZ4 78 aa13.22□□□□□ -0.29
LMNB1-202ENST00000395354 TAX1BP3O14907 124 aa13.22□□□□□ -0.29
LMNB1-202ENST00000395354 FXYD2P54710 66 aa13.22□□□□□ -0.29
LMNB1-202ENST00000395354 NDUFA12Q9UI09 145 aa13.22□□□□□ -0.29
LMNB1-202ENST00000395354 COX11Q9Y6N1 276 aa13.22□□□□□ -0.29
LMNB1-202ENST00000395354 PTTG1IPP53801 180 aa13.21□□□□□ -0.29
LMNB1-202ENST00000395354 SRSF9Q13242 221 aaKnown RBP eCLIP13.21□□□□□ -0.29
LMNB1-202ENST00000395354 LYPD5Q6UWN5 251 aa13.21□□□□□ -0.29
LMNB1-202ENST00000395354 DNAH7Q8WXX0 4024 aa13.21□□□□□ -0.29
LMNB1-202ENST00000395354 C3orf84H3BNL1 204 aa13.2□□□□□ -0.3
LMNB1-202ENST00000395354 C10orf126Q8N4M7 172 aa13.2□□□□□ -0.3
LMNB1-202ENST00000395354 A0A0J9YXY3 114 aa13.2□□□□□ -0.3
LMNB1-202ENST00000395354 SS18Q15532 418 aa13.2□□□□□ -0.3
LMNB1-202ENST00000395354 IGHV3OR16-9A0A0B4J2B5 98 aa13.19□□□□□ -0.3
LMNB1-202ENST00000395354 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
LMNB1-202ENST00000395354 NDUFA1O15239 70 aa13.19□□□□□ -0.3
LMNB1-202ENST00000395354 CSMD3Q7Z407 3707 aa13.19□□□□□ -0.3
LMNB1-202ENST00000395354 IGKV3OR2-268A0A0C4DH90 116 aa13.18□□□□□ -0.3
LMNB1-202ENST00000395354 SMIM13P0DJ93 91 aa13.18□□□□□ -0.3
LMNB1-202ENST00000395354 CASC10Q5T4H9 136 aa13.18□□□□□ -0.3
LMNB1-202ENST00000395354 C15orf53Q8NAA6 179 aa13.18□□□□□ -0.3
LMNB1-202ENST00000395354 TMEM238LA0A1B0GVL6 79 aa13.17□□□□□ -0.3
LMNB1-202ENST00000395354 A6NJY4 79 aa13.17□□□□□ -0.3
LMNB1-202ENST00000395354 TENM2Q9NT68 2774 aa13.17□□□□□ -0.3
LMNB1-202ENST00000395354 A0A087WZ39 114 aa13.16□□□□□ -0.3
LMNB1-202ENST00000395354 TIMM17BO60830 172 aa13.16□□□□□ -0.3
LMNB1-202ENST00000395354 LINC01561Q8N1V8 128 aa13.16□□□□□ -0.3
LMNB1-202ENST00000395354 APLNQ9ULZ1 77 aa13.16□□□□□ -0.3
LMNB1-202ENST00000395354 IGHV3-30P01768 117 aa13.15□□□□□ -0.3
LMNB1-202ENST00000395354 IGHV3-30-5P0DP03 117 aa13.15□□□□□ -0.3
LMNB1-202ENST00000395354 A0A1B0GWB2 263 aa13.15□□□□□ -0.3
LMNB1-202ENST00000395354 K7EP13 123 aa13.15□□□□□ -0.3
LMNB1-202ENST00000395354 ANGP03950 147 aaKnown RBP13.15□□□□□ -0.3
LMNB1-202ENST00000395354 Q6ZVH6 145 aa13.15□□□□□ -0.3
LMNB1-202ENST00000395354 LINC00269Q8N2A0 174 aa13.15□□□□□ -0.3
LMNB1-202ENST00000395354 NHP2Q9NX24 153 aaKnown RBP13.14□□□□□ -0.31
LMNB1-202ENST00000395354 C9orf118A6NHY6 69 aa13.13□□□□□ -0.31
LMNB1-202ENST00000395354 HERV-K104P63124 156 aa13.13□□□□□ -0.31
LMNB1-202ENST00000395354 REG3AQ06141 175 aa13.13□□□□□ -0.31
LMNB1-202ENST00000395354 LITAFQ99732 161 aa13.13□□□□□ -0.31
LMNB1-202ENST00000395354 SPANXDQ9BXN6 97 aa13.13□□□□□ -0.31
LMNB1-202ENST00000395354 SPANXCQ9NY87 97 aa13.13□□□□□ -0.31
LMNB1-202ENST00000395354 ZNF625Q96I27 306 aaPredicted RBP13.11□□□□□ -0.31
LMNB1-202ENST00000395354 Q9H8V8 135 aa13.11□□□□□ -0.31
LMNB1-202ENST00000395354 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
LMNB1-202ENST00000395354 CD164L2Q6UWJ8 174 aa13.11□□□□□ -0.31
LMNB1-202ENST00000395354 COX7B2Q8TF08 81 aa13.11□□□□□ -0.31
LMNB1-202ENST00000395354 PRR34Q9NV39 138 aa13.11□□□□□ -0.31
LMNB1-202ENST00000395354 XCL1P47992 114 aa13.1□□□□□ -0.31
LMNB1-202ENST00000395354 RPL24P83731 157 aaKnown RBP13.09□□□□□ -0.31
LMNB1-202ENST00000395354 SFTA2Q6UW10 78 aa13.09□□□□□ -0.31
LMNB1-202ENST00000395354 CLPSL2Q6UWE3 100 aa13.09□□□□□ -0.31
LMNB1-202ENST00000395354 C5orf38Q86SI9 138 aa13.09□□□□□ -0.31
LMNB1-202ENST00000395354 Q8N3U1 123 aa13.09□□□□□ -0.31
LMNB1-202ENST00000395354 MIAQ16674 131 aa13.08□□□□□ -0.32
LMNB1-202ENST00000395354 ESRGQ1W209 222 aa13.08□□□□□ -0.32
LMNB1-202ENST00000395354 CHCHD10Q8WYQ3 142 aaPredicted RBP13.08□□□□□ -0.32
LMNB1-202ENST00000395354 DYNC2H1Q8NCM8 4307 aaKnown RBP13.08□□□□□ -0.32
LMNB1-202ENST00000395354 RAB37Q96AX2 223 aa13.07□□□□□ -0.32
LMNB1-202ENST00000395354 STARD9Q9P2P6 4700 aa13.07□□□□□ -0.32
LMNB1-202ENST00000395354 K7ERJ3 54 aa13.07□□□□□ -0.32
LMNB1-202ENST00000395354 IFITM1P13164 125 aa13.07□□□□□ -0.32
LMNB1-202ENST00000395354 MUSTN1Q8IVN3 82 aa13.07□□□□□ -0.32
LMNB1-202ENST00000395354 CCL18P55774 89 aa13.06□□□□□ -0.32
LMNB1-202ENST00000395354 ADAMTSL4-AS1Q5T5F5 129 aa13.06□□□□□ -0.32
LMNB1-202ENST00000395354 COX7A2LO14548 114 aa13.05□□□□□ -0.32
LMNB1-202ENST00000395354 VAMP3Q15836 100 aa13.05□□□□□ -0.32
LMNB1-202ENST00000395354 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
LMNB1-202ENST00000395354 TRAV8-4A0A0B4J246 113 aa13.04□□□□□ -0.32
LMNB1-202ENST00000395354 H3BUT2 72 aa13.04□□□□□ -0.32
LMNB1-202ENST00000395354 WFDC10BQ8IUB3 73 aa13.04□□□□□ -0.32
LMNB1-202ENST00000395354 COPS9Q8WXC6 57 aa13.04□□□□□ -0.32
LMNB1-202ENST00000395354 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.03□□□□□ -0.32
LMNB1-202ENST00000395354 Q8IZM0 81 aa13.03□□□□□ -0.32
LMNB1-202ENST00000395354 PPDPFQ9H3Y8 114 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 943.2 ms